RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 LINC00304Q8N9R0 145 aa4.82□□□□□ -1.64
HPS4-215ENST00000491142 SPINK1P00995 79 aa4.81□□□□□ -1.64
HPS4-215ENST00000491142 RPS29P62273 56 aaKnown RBP4.81□□□□□ -1.64
HPS4-215ENST00000491142 KRTAP4-1Q9BYQ7 146 aa4.81□□□□□ -1.64
HPS4-215ENST00000491142 NDUFS5O43920 106 aa4.79□□□□□ -1.64
HPS4-215ENST00000491142 LINC00313P59037 77 aa4.79□□□□□ -1.64
HPS4-215ENST00000491142 KRTAP13-3Q3SY46 172 aa4.79□□□□□ -1.64
HPS4-215ENST00000491142 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
HPS4-215ENST00000491142 SPAG11AQ6PDA7 123 aa4.78□□□□□ -1.64
HPS4-215ENST00000491142 Q8N9P0 234 aaPredicted RBP4.78□□□□□ -1.64
HPS4-215ENST00000491142 FP248Q71RG6 208 aaPredicted RBP4.77□□□□□ -1.65
HPS4-215ENST00000491142 LOC101927531A0A1B0GV80 90 aa4.76□□□□□ -1.65
HPS4-215ENST00000491142 KRTAP16-1A8MUX0 517 aa4.76□□□□□ -1.65
HPS4-215ENST00000491142 C4orf26Q17RF5 130 aa4.73□□□□□ -1.65
HPS4-215ENST00000491142 Q5W150 140 aa4.73□□□□□ -1.65
HPS4-215ENST00000491142 SEC61BP60468 96 aaKnown RBP4.71□□□□□ -1.66
HPS4-215ENST00000491142 PCOTHQ58A44 107 aa4.71□□□□□ -1.66
HPS4-215ENST00000491142 Q1T7F1 81 aa4.7□□□□□ -1.66
HPS4-215ENST00000491142 MT1HP80294 61 aa4.69□□□□□ -1.66
HPS4-215ENST00000491142 KRTAP19-2Q3LHN2 52 aa4.69□□□□□ -1.66
HPS4-215ENST00000491142 IGKV2-30P06310 120 aa4.68□□□□□ -1.66
HPS4-215ENST00000491142 V9GYY9 64 aa4.67□□□□□ -1.66
HPS4-215ENST00000491142 COA5Q86WW8 74 aa4.66□□□□□ -1.66
HPS4-215ENST00000491142 MPLKIPQ8TAP9 179 aa4.66□□□□□ -1.66
HPS4-215ENST00000491142 KRTAP10-6P60371 365 aaPredicted RBP4.64□□□□□ -1.67
HPS4-215ENST00000491142 HRES1P13985 223 aa4.63□□□□□ -1.67
HPS4-215ENST00000491142 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
HPS4-215ENST00000491142 FLGP20930 4061 aaPredicted RBP4.62□□□□□ -1.67
HPS4-215ENST00000491142 DMAC1Q96GE9 116 aa4.62□□□□□ -1.67
HPS4-215ENST00000491142 C20orf166-AS1Q96NR2 134 aa4.62□□□□□ -1.67
HPS4-215ENST00000491142 A8MUU9 505 aa4.61□□□□□ -1.67
HPS4-215ENST00000491142 ACYP2P14621 99 aa4.61□□□□□ -1.67
HPS4-215ENST00000491142 SSPOA2VEC9 5147 aa4.6□□□□□ -1.67
HPS4-215ENST00000491142 USH2AO75445 5202 aa4.6□□□□□ -1.67
HPS4-215ENST00000491142 C7orf65Q6ZTY9 151 aa4.58□□□□□ -1.68
HPS4-215ENST00000491142 Q75L30 129 aa4.57□□□□□ -1.68
HPS4-215ENST00000491142 LINC01558Q9Y6Z2 57 aa4.57□□□□□ -1.68
HPS4-215ENST00000491142 IGKV2D-30A0A075B6S6 120 aa4.56□□□□□ -1.68
HPS4-215ENST00000491142 M0R2T5 61 aa4.56□□□□□ -1.68
HPS4-215ENST00000491142 C9orf92A6NGG3 77 aa4.55□□□□□ -1.68
HPS4-215ENST00000491142 A8MUN3 132 aa4.54□□□□□ -1.68
HPS4-215ENST00000491142 Q5VV11 94 aa4.54□□□□□ -1.68
HPS4-215ENST00000491142 KRTAP9-8Q9BYQ0 159 aa4.54□□□□□ -1.68
HPS4-215ENST00000491142 PRO0628Q9UI54 55 aa4.54□□□□□ -1.68
HPS4-215ENST00000491142 PSPHP1O15172 72 aa4.53□□□□□ -1.68
HPS4-215ENST00000491142 PRR15LQ9BU68 103 aa4.52□□□□□ -1.69
HPS4-215ENST00000491142 CHKB-CPT1BH3BT56 60 aa4.51□□□□□ -1.69
HPS4-215ENST00000491142 BRK1Q8WUW1 75 aa4.51□□□□□ -1.69
HPS4-215ENST00000491142 FCGBPQ9Y6R7 5405 aaPredicted RBP4.5□□□□□ -1.69
HPS4-215ENST00000491142 COX6B2Q6YFQ2 88 aa4.48□□□□□ -1.69
HPS4-215ENST00000491142 SPINK7P58062 85 aa4.45□□□□□ -1.7
HPS4-215ENST00000491142 RPL37P61927 97 aaKnown RBP4.45□□□□□ -1.7
HPS4-215ENST00000491142 MACF1Q9UPN3 7388 aaKnown RBP4.44□□□□□ -1.7
HPS4-215ENST00000491142 SYNE2Q8WXH0 6885 aaKnown RBP4.43□□□□□ -1.7
HPS4-215ENST00000491142 ATP11AUNQ6ZP68 121 aa4.42□□□□□ -1.7
HPS4-215ENST00000491142 A6NED7 52 aa4.41□□□□□ -1.7
HPS4-215ENST00000491142 SPTSSBQ8NFR3 76 aa4.41□□□□□ -1.7
HPS4-215ENST00000491142 CDC42SE1Q9NRR8 79 aa4.41□□□□□ -1.7
HPS4-215ENST00000491142 A0A1B0GU69 56 aa4.4□□□□□ -1.71
HPS4-215ENST00000491142 LCA10Q71F78 164 aa4.39□□□□□ -1.71
HPS4-215ENST00000491142 A8MU10 97 aa4.35□□□□□ -1.71
HPS4-215ENST00000491142 SPATA8Q6RVD6 105 aa4.32□□□□□ -1.72
HPS4-215ENST00000491142 UQCR11O14957 56 aa4.31□□□□□ -1.72
HPS4-215ENST00000491142 SEC61GP60059 68 aa4.31□□□□□ -1.72
HPS4-215ENST00000491142 MT2AP02795 61 aa4.29□□□□□ -1.72
HPS4-215ENST00000491142 MIR22HGQ0VDD5 57 aa4.28□□□□□ -1.72
HPS4-215ENST00000491142 A6NN06 94 aa4.26□□□□□ -1.73
HPS4-215ENST00000491142 MT1FP04733 61 aa4.26□□□□□ -1.73
HPS4-215ENST00000491142 PMAIP1Q13794 54 aa4.26□□□□□ -1.73
HPS4-215ENST00000491142 S4R3F8 94 aa4.24□□□□□ -1.73
HPS4-215ENST00000491142 H1FX-AS1Q4G0G2 97 aa4.23□□□□□ -1.73
HPS4-215ENST00000491142 KRTAP10-10P60014 251 aa4.22□□□□□ -1.73
HPS4-215ENST00000491142 A0A1B0GU33 70 aa4.2□□□□□ -1.74
HPS4-215ENST00000491142 KRTAP19-6Q3LI70 58 aa4.2□□□□□ -1.74
HPS4-215ENST00000491142 RBM12B-AS1Q9P1G2 102 aa4.2□□□□□ -1.74
HPS4-215ENST00000491142 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
HPS4-215ENST00000491142 NEBP20929 6669 aa4.19□□□□□ -1.74
HPS4-215ENST00000491142 H0YAA0 97 aa4.18□□□□□ -1.74
HPS4-215ENST00000491142 KTN1-AS1Q86SY8 53 aa4.18□□□□□ -1.74
HPS4-215ENST00000491142 MUC12Q9UKN1 5478 aa4.15□□□□□ -1.74
HPS4-215ENST00000491142 CSAG1Q6PB30 78 aa4.11□□□□□ -1.75
HPS4-215ENST00000491142 PRAC1Q96KF2 57 aa4.09□□□□□ -1.75
HPS4-215ENST00000491142 P0C880 135 aa4.07□□□□□ -1.76
HPS4-215ENST00000491142 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
HPS4-215ENST00000491142 KRTAP13-4Q3LI77 160 aa4.06□□□□□ -1.76
HPS4-215ENST00000491142 ADM2Q7Z4H4 148 aa4.06□□□□□ -1.76
HPS4-215ENST00000491142 K7ERS5 55 aa4.04□□□□□ -1.76
HPS4-215ENST00000491142 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.76
HPS4-215ENST00000491142 M0QZ58 72 aa4.01□□□□□ -1.77
HPS4-215ENST00000491142 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
HPS4-215ENST00000491142 A0A0D9SG42 100 aa3.96□□□□□ -1.78
HPS4-215ENST00000491142 KMT2DO14686 5537 aa3.93□□□□□ -1.78
HPS4-215ENST00000491142 KRTAP12-1P59990 96 aa3.93□□□□□ -1.78
HPS4-215ENST00000491142 ROMO1P60602 79 aa3.92□□□□□ -1.78
HPS4-215ENST00000491142 KRTAP12-2P59991 146 aa3.91□□□□□ -1.78
HPS4-215ENST00000491142 R4GN34 69 aa3.9□□□□□ -1.79
HPS4-215ENST00000491142 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
HPS4-215ENST00000491142 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
HPS4-215ENST00000491142 SPINT4Q6UDR6 99 aa3.86□□□□□ -1.79
HPS4-215ENST00000491142 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms