RNA–Protein interactions for RNA: ENST00000490980.1

FRAT1-202, Transcript of FRAT1, WNT signaling pathway regulator, humanhuman

TSL 2

Gene FRAT1, Length 633 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAT1-202ENST00000490980 FAM236AA0A1B0GUQ0 79 aa6.5□□□□□ -1.37
FRAT1-202ENST00000490980 FAM236BA0A1B0GV22 79 aa6.5□□□□□ -1.37
FRAT1-202ENST00000490980 SMIM20Q8N5G0 67 aa6.49□□□□□ -1.37
FRAT1-202ENST00000490980 USH2AO75445 5202 aa6.48□□□□□ -1.37
FRAT1-202ENST00000490980 TRAV7A0A075B6U4 112 aa6.46□□□□□ -1.38
FRAT1-202ENST00000490980 NDUFC1O43677 76 aa6.46□□□□□ -1.38
FRAT1-202ENST00000490980 KRTAP19-1Q8IUB9 90 aa6.42□□□□□ -1.38
FRAT1-202ENST00000490980 DMAC1Q96GE9 116 aa6.4□□□□□ -1.38
FRAT1-202ENST00000490980 SSPOA2VEC9 5147 aa6.39□□□□□ -1.39
FRAT1-202ENST00000490980 H0YAA0 97 aa6.37□□□□□ -1.39
FRAT1-202ENST00000490980 KRTAP19-6Q3LI70 58 aa6.36□□□□□ -1.39
FRAT1-202ENST00000490980 SPRR2GQ9BYE4 73 aa6.36□□□□□ -1.39
FRAT1-202ENST00000490980 CRIPTQ9P021 101 aa6.34□□□□□ -1.39
FRAT1-202ENST00000490980 SERP2Q8N6R1 65 aa6.31□□□□□ -1.4
FRAT1-202ENST00000490980 KRTAP19-8Q3LI54 63 aa6.3□□□□□ -1.4
FRAT1-202ENST00000490980 ADM2Q7Z4H4 148 aa6.29□□□□□ -1.4
FRAT1-202ENST00000490980 SNURFQ9Y675 71 aa6.29□□□□□ -1.4
FRAT1-202ENST00000490980 ACYP2P14621 99 aa6.28□□□□□ -1.4
FRAT1-202ENST00000490980 Q5VV11 94 aa6.28□□□□□ -1.4
FRAT1-202ENST00000490980 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.26□□□□□ -1.41
FRAT1-202ENST00000490980 MT1BP07438 61 aa6.26□□□□□ -1.41
FRAT1-202ENST00000490980 C20orf197Q8N268 126 aa6.26□□□□□ -1.41
FRAT1-202ENST00000490980 FCGBPQ9Y6R7 5405 aaPredicted RBP6.24□□□□□ -1.41
FRAT1-202ENST00000490980 SPANXA2-OT1Q8N9U9 137 aa6.21□□□□□ -1.42
FRAT1-202ENST00000490980 SPTSSBQ8NFR3 76 aa6.19□□□□□ -1.42
FRAT1-202ENST00000490980 CHKB-CPT1BH3BT56 60 aa6.17□□□□□ -1.42
FRAT1-202ENST00000490980 P0C880 135 aa6.16□□□□□ -1.42
FRAT1-202ENST00000490980 COX7CP15954 63 aa6.16□□□□□ -1.42
FRAT1-202ENST00000490980 KRTAP3-2Q9BYR7 98 aa6.14□□□□□ -1.43
FRAT1-202ENST00000490980 A6NN06 94 aa6.13□□□□□ -1.43
FRAT1-202ENST00000490980 KRTAP9-7A8MTY7 169 aa6.13□□□□□ -1.43
FRAT1-202ENST00000490980 R4GN34 69 aa6.13□□□□□ -1.43
FRAT1-202ENST00000490980 KRTAP10-5P60370 271 aa6.09□□□□□ -1.43
FRAT1-202ENST00000490980 M0QZ58 72 aa6.08□□□□□ -1.44
FRAT1-202ENST00000490980 MACF1Q9UPN3 7388 aaKnown RBP6.06□□□□□ -1.44
FRAT1-202ENST00000490980 ANAPC13Q9BS18 74 aa6.03□□□□□ -1.44
FRAT1-202ENST00000490980 H7BZZ5 65 aa6.02□□□□□ -1.45
FRAT1-202ENST00000490980 COA5Q86WW8 74 aa6.02□□□□□ -1.45
FRAT1-202ENST00000490980 PLAC4Q8WY50 150 aa6.01□□□□□ -1.45
FRAT1-202ENST00000490980 CYSTM1Q9H1C7 97 aa6.01□□□□□ -1.45
FRAT1-202ENST00000490980 LINC01554Q52M75 96 aa5.97□□□□□ -1.45
FRAT1-202ENST00000490980 PRO2289Q9P1D8 64 aa5.95□□□□□ -1.46
FRAT1-202ENST00000490980 SYNE2Q8WXH0 6885 aaKnown RBP5.93□□□□□ -1.46
FRAT1-202ENST00000490980 KRTAP6-3Q3LI67 103 aa5.93□□□□□ -1.46
FRAT1-202ENST00000490980 MT1XP80297 61 aa5.91□□□□□ -1.46
FRAT1-202ENST00000490980 CCDC179H3BU77 68 aa5.89□□□□□ -1.47
FRAT1-202ENST00000490980 SEC61GP60059 68 aa5.86□□□□□ -1.47
FRAT1-202ENST00000490980 SERP1Q9Y6X1 66 aa5.84□□□□□ -1.47
FRAT1-202ENST00000490980 KRTAP13-4Q3LI77 160 aa5.83□□□□□ -1.48
FRAT1-202ENST00000490980 ATP5EP56381 51 aaPredicted RBP5.8□□□□□ -1.48
FRAT1-202ENST00000490980 KRTAP12-2P59991 146 aa5.75□□□□□ -1.49
FRAT1-202ENST00000490980 A0A1B0GU33 70 aa5.73□□□□□ -1.49
FRAT1-202ENST00000490980 KRTAP5-9P26371 169 aa5.73□□□□□ -1.49
FRAT1-202ENST00000490980 A0A1B0GU69 56 aa5.72□□□□□ -1.49
FRAT1-202ENST00000490980 TMEM258P61165 79 aa5.7□□□□□ -1.5
FRAT1-202ENST00000490980 SPATA8Q6RVD6 105 aa5.69□□□□□ -1.5
FRAT1-202ENST00000490980 A0A0D9SG42 100 aa5.66□□□□□ -1.5
FRAT1-202ENST00000490980 CAMK2N1Q7Z7J9 78 aa5.66□□□□□ -1.5
FRAT1-202ENST00000490980 KRTAP10-7P60409 375 aaPredicted RBP5.64□□□□□ -1.51
FRAT1-202ENST00000490980 KRTAP8-1Q8IUC2 63 aa5.63□□□□□ -1.51
FRAT1-202ENST00000490980 KRTAP10-12P60413 245 aa5.62□□□□□ -1.51
FRAT1-202ENST00000490980 PRR15LQ9BU68 103 aa5.61□□□□□ -1.51
FRAT1-202ENST00000490980 SPINT4Q6UDR6 99 aa5.59□□□□□ -1.51
FRAT1-202ENST00000490980 NEBP20929 6669 aa5.59□□□□□ -1.52
FRAT1-202ENST00000490980 SMIM26A0A096LP01 95 aa5.58□□□□□ -1.52
FRAT1-202ENST00000490980 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
FRAT1-202ENST00000490980 SPRR2FQ96RM1 72 aa5.58□□□□□ -1.52
FRAT1-202ENST00000490980 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
FRAT1-202ENST00000490980 LINC01558Q9Y6Z2 57 aa5.58□□□□□ -1.52
FRAT1-202ENST00000490980 KRTAP12-1P59990 96 aa5.57□□□□□ -1.52
FRAT1-202ENST00000490980 KMT2DO14686 5537 aa5.53□□□□□ -1.52
FRAT1-202ENST00000490980 A8MU10 97 aa5.51□□□□□ -1.53
FRAT1-202ENST00000490980 MUC12Q9UKN1 5478 aa5.5□□□□□ -1.53
FRAT1-202ENST00000490980 SPRR2EP22531 72 aa5.47□□□□□ -1.53
FRAT1-202ENST00000490980 SPRR2BP35325 72 aa5.47□□□□□ -1.53
FRAT1-202ENST00000490980 SPRR2AP35326 72 aa5.47□□□□□ -1.53
FRAT1-202ENST00000490980 UQCR11O14957 56 aa5.42□□□□□ -1.54
FRAT1-202ENST00000490980 LCE1AQ5T7P2 110 aa5.42□□□□□ -1.54
FRAT1-202ENST00000490980 KRTAP20-1Q3LI63 56 aa5.4□□□□□ -1.54
FRAT1-202ENST00000490980 V9GYY9 64 aa5.37□□□□□ -1.55
FRAT1-202ENST00000490980 MDN1Q9NU22 5596 aa5.36□□□□□ -1.55
FRAT1-202ENST00000490980 Q1T7F1 81 aa5.33□□□□□ -1.56
FRAT1-202ENST00000490980 KRTAP2-3P0C7H8 128 aa5.31□□□□□ -1.56
FRAT1-202ENST00000490980 MIR22HGQ0VDD5 57 aa5.31□□□□□ -1.56
FRAT1-202ENST00000490980 KRTAP2-4Q9BYR9 128 aa5.31□□□□□ -1.56
FRAT1-202ENST00000490980 C10orf95Q9H7T3 257 aa5.31□□□□□ -1.56
FRAT1-202ENST00000490980 PSPHP1O15172 72 aa5.29□□□□□ -1.56
FRAT1-202ENST00000490980 SPRR2DP22532 72 aa5.29□□□□□ -1.56
FRAT1-202ENST00000490980 PCP4P48539 62 aa5.29□□□□□ -1.56
FRAT1-202ENST00000490980 KRTAP19-7Q3SYF9 63 aa5.28□□□□□ -1.56
FRAT1-202ENST00000490980 TNP1P09430 55 aa5.27□□□□□ -1.57
FRAT1-202ENST00000490980 MT1EP04732 61 aa5.23□□□□□ -1.57
FRAT1-202ENST00000490980 RPS28P62857 69 aaKnown RBP5.21□□□□□ -1.58
FRAT1-202ENST00000490980 K7ERS5 55 aa5.19□□□□□ -1.58
FRAT1-202ENST00000490980 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
FRAT1-202ENST00000490980 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
FRAT1-202ENST00000490980 KRTAP19-3Q7Z4W3 81 aa5.15□□□□□ -1.59
FRAT1-202ENST00000490980 KRTAP2-2Q9BYT5 123 aa5.15□□□□□ -1.59
FRAT1-202ENST00000490980 KRTAP2-1Q9BYU5 128 aa5.15□□□□□ -1.59
FRAT1-202ENST00000490980 A6NED7 52 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms