RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 ACYP2P14621 99 aa9.5□□□□□ -0.89
SHROOM3-209ENST00000490690 KRTAP9-8Q9BYQ0 159 aa9.47□□□□□ -0.89
SHROOM3-209ENST00000490690 MT2AP02795 61 aa9.4□□□□□ -0.9
SHROOM3-209ENST00000490690 KRTAP3-3Q9BYR6 98 aa9.4□□□□□ -0.9
SHROOM3-209ENST00000490690 KRTAP10-10P60014 251 aa9.38□□□□□ -0.91
SHROOM3-209ENST00000490690 LCE2DQ5TA82 110 aaPredicted RBP9.38□□□□□ -0.91
SHROOM3-209ENST00000490690 SPTSSBQ8NFR3 76 aa9.38□□□□□ -0.91
SHROOM3-209ENST00000490690 CHKB-CPT1BH3BT56 60 aa9.34□□□□□ -0.91
SHROOM3-209ENST00000490690 H7BZZ5 65 aa9.33□□□□□ -0.92
SHROOM3-209ENST00000490690 MT1FP04733 61 aa9.31□□□□□ -0.92
SHROOM3-209ENST00000490690 H0YAA0 97 aa9.3□□□□□ -0.92
SHROOM3-209ENST00000490690 CCDC179H3BU77 68 aa9.27□□□□□ -0.93
SHROOM3-209ENST00000490690 KRTAP9-2Q9BYQ4 174 aa9.27□□□□□ -0.93
SHROOM3-209ENST00000490690 ATP5EP56381 51 aaPredicted RBP9.22□□□□□ -0.93
SHROOM3-209ENST00000490690 CYSTM1Q9H1C7 97 aa9.21□□□□□ -0.94
SHROOM3-209ENST00000490690 CRIPTQ9P021 101 aa9.18□□□□□ -0.94
SHROOM3-209ENST00000490690 COA5Q86WW8 74 aa9.16□□□□□ -0.94
SHROOM3-209ENST00000490690 KRTAP9-3Q9BYQ3 159 aa9.16□□□□□ -0.94
SHROOM3-209ENST00000490690 ADM2Q7Z4H4 148 aa9.12□□□□□ -0.95
SHROOM3-209ENST00000490690 TMEM258P61165 79 aa9.11□□□□□ -0.95
SHROOM3-209ENST00000490690 SPRR2GQ9BYE4 73 aa8.99□□□□□ -0.97
SHROOM3-209ENST00000490690 LCE2BO14633 110 aa8.96□□□□□ -0.98
SHROOM3-209ENST00000490690 SEC61GP60059 68 aa8.96□□□□□ -0.98
SHROOM3-209ENST00000490690 KRTAP19-1Q8IUB9 90 aa8.93□□□□□ -0.98
SHROOM3-209ENST00000490690 R4GN34 69 aa8.93□□□□□ -0.98
SHROOM3-209ENST00000490690 P0C880 135 aa8.91□□□□□ -0.98
SHROOM3-209ENST00000490690 KRTAP3-2Q9BYR7 98 aa8.91□□□□□ -0.98
SHROOM3-209ENST00000490690 SERP1Q9Y6X1 66 aa8.9□□□□□ -0.98
SHROOM3-209ENST00000490690 CRCT1Q9UGL9 99 aa8.88□□□□□ -0.99
SHROOM3-209ENST00000490690 PCP4P48539 62 aa8.87□□□□□ -0.99
SHROOM3-209ENST00000490690 Q5VV11 94 aa8.85□□□□□ -0.99
SHROOM3-209ENST00000490690 M0QZ58 72 aa8.83□□□□□ -1
SHROOM3-209ENST00000490690 KRTAP19-8Q3LI54 63 aa8.83□□□□□ -1
SHROOM3-209ENST00000490690 KRTAP9-6A0A140TA67 174 aa8.81□□□□□ -1
SHROOM3-209ENST00000490690 USH2AO75445 5202 aa8.8□□□□□ -1
SHROOM3-209ENST00000490690 FSIP2Q5CZC0 6907 aa8.79□□□□□ -1
SHROOM3-209ENST00000490690 A0A1B0GU69 56 aa8.75□□□□□ -1.01
SHROOM3-209ENST00000490690 PRR15LQ9BU68 103 aa8.73□□□□□ -1.01
SHROOM3-209ENST00000490690 MT1BP07438 61 aa8.68□□□□□ -1.02
SHROOM3-209ENST00000490690 KRTAP19-6Q3LI70 58 aa8.67□□□□□ -1.02
SHROOM3-209ENST00000490690 PLAC4Q8WY50 150 aa8.66□□□□□ -1.02
SHROOM3-209ENST00000490690 A0A1B0GU33 70 aa8.64□□□□□ -1.03
SHROOM3-209ENST00000490690 LINC01554Q52M75 96 aa8.64□□□□□ -1.03
SHROOM3-209ENST00000490690 LINC01558Q9Y6Z2 57 aa8.64□□□□□ -1.03
SHROOM3-209ENST00000490690 SSPOA2VEC9 5147 aa8.61□□□□□ -1.03
SHROOM3-209ENST00000490690 V9GYY9 64 aa8.6□□□□□ -1.03
SHROOM3-209ENST00000490690 A6NN06 94 aa8.59□□□□□ -1.03
SHROOM3-209ENST00000490690 RPS28P62857 69 aaKnown RBP8.52□□□□□ -1.05
SHROOM3-209ENST00000490690 PRO2289Q9P1D8 64 aa8.5□□□□□ -1.05
SHROOM3-209ENST00000490690 SMIM26A0A096LP01 95 aa8.49□□□□□ -1.05
SHROOM3-209ENST00000490690 KRTAP13-4Q3LI77 160 aa8.49□□□□□ -1.05
SHROOM3-209ENST00000490690 KRTAP10-5P60370 271 aa8.45□□□□□ -1.06
SHROOM3-209ENST00000490690 Q1T7F1 81 aa8.45□□□□□ -1.06
SHROOM3-209ENST00000490690 SPATA8Q6RVD6 105 aa8.43□□□□□ -1.06
SHROOM3-209ENST00000490690 UQCR11O14957 56 aa8.4□□□□□ -1.06
SHROOM3-209ENST00000490690 FCGBPQ9Y6R7 5405 aaPredicted RBP8.39□□□□□ -1.07
SHROOM3-209ENST00000490690 A0A0D9SG42 100 aa8.37□□□□□ -1.07
SHROOM3-209ENST00000490690 CAMK2N1Q7Z7J9 78 aa8.3□□□□□ -1.08
SHROOM3-209ENST00000490690 MT1XP80297 61 aa8.28□□□□□ -1.08
SHROOM3-209ENST00000490690 PSPHP1O15172 72 aa8.27□□□□□ -1.09
SHROOM3-209ENST00000490690 SPINT4Q6UDR6 99 aa8.27□□□□□ -1.09
SHROOM3-209ENST00000490690 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.21□□□□□ -1.1
SHROOM3-209ENST00000490690 KRTAP12-1P59990 96 aa8.21□□□□□ -1.1
SHROOM3-209ENST00000490690 MIR22HGQ0VDD5 57 aa8.21□□□□□ -1.1
SHROOM3-209ENST00000490690 A8MU10 97 aa8.19□□□□□ -1.1
SHROOM3-209ENST00000490690 KRTAP12-2P59991 146 aa8.13□□□□□ -1.11
SHROOM3-209ENST00000490690 A6NED7 52 aa8.11□□□□□ -1.11
SHROOM3-209ENST00000490690 K7ERS5 55 aa8.1□□□□□ -1.11
SHROOM3-209ENST00000490690 MACF1Q9UPN3 7388 aaKnown RBP8.1□□□□□ -1.11
SHROOM3-209ENST00000490690 KRTAP9-7A8MTY7 169 aa7.98□□□□□ -1.13
SHROOM3-209ENST00000490690 KRTAP10-12P60413 245 aa7.92□□□□□ -1.14
SHROOM3-209ENST00000490690 KRTAP6-3Q3LI67 103 aa7.92□□□□□ -1.14
SHROOM3-209ENST00000490690 SYNE2Q8WXH0 6885 aaKnown RBP7.89□□□□□ -1.15
SHROOM3-209ENST00000490690 KRTAP10-7P60409 375 aaPredicted RBP7.88□□□□□ -1.15
SHROOM3-209ENST00000490690 CDC42SE1Q9NRR8 79 aa7.88□□□□□ -1.15
SHROOM3-209ENST00000490690 TNP1P09430 55 aa7.81□□□□□ -1.16
SHROOM3-209ENST00000490690 KRTAP8-1Q8IUC2 63 aa7.81□□□□□ -1.16
SHROOM3-209ENST00000490690 C10orf95Q9H7T3 257 aa7.77□□□□□ -1.17
SHROOM3-209ENST00000490690 KRTAP5-9P26371 169 aa7.76□□□□□ -1.17
SHROOM3-209ENST00000490690 KRTAP4-8A0A0G2JLE6 195 aa7.69□□□□□ -1.18
SHROOM3-209ENST00000490690 KRTAP4-8Q9BYQ9 185 aa7.69□□□□□ -1.18
SHROOM3-209ENST00000490690 KMT2DO14686 5537 aa7.67□□□□□ -1.18
SHROOM3-209ENST00000490690 KRTAP25-1Q3LHN0 102 aa7.64□□□□□ -1.19
SHROOM3-209ENST00000490690 SPRR2FQ96RM1 72 aa7.64□□□□□ -1.19
SHROOM3-209ENST00000490690 BRK1Q8WUW1 75 aa7.54□□□□□ -1.2
SHROOM3-209ENST00000490690 ROMO1P60602 79 aa7.53□□□□□ -1.2
SHROOM3-209ENST00000490690 MUC12Q9UKN1 5478 aa7.47□□□□□ -1.21
SHROOM3-209ENST00000490690 LCE3AQ5TA76 89 aa7.44□□□□□ -1.22
SHROOM3-209ENST00000490690 KRTAP23-1A1A580 65 aa7.42□□□□□ -1.22
SHROOM3-209ENST00000490690 NEBP20929 6669 aa7.41□□□□□ -1.22
SHROOM3-209ENST00000490690 SPRR2EP22531 72 aa7.4□□□□□ -1.22
SHROOM3-209ENST00000490690 SPRR2BP35325 72 aa7.4□□□□□ -1.22
SHROOM3-209ENST00000490690 SPRR2AP35326 72 aa7.4□□□□□ -1.22
SHROOM3-209ENST00000490690 KRTAP19-7Q3SYF9 63 aa7.38□□□□□ -1.23
SHROOM3-209ENST00000490690 MDN1Q9NU22 5596 aa7.35□□□□□ -1.23
SHROOM3-209ENST00000490690 KRTAP19-5Q3LI72 72 aa7.34□□□□□ -1.23
SHROOM3-209ENST00000490690 LCE1AQ5T7P2 110 aa7.34□□□□□ -1.23
SHROOM3-209ENST00000490690 MT1EP04732 61 aa7.33□□□□□ -1.24
SHROOM3-209ENST00000490690 PP632Q6XCG6 107 aa7.3□□□□□ -1.24
SHROOM3-209ENST00000490690 KRTAP12-3P60328 96 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms