RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 FAM236DA0A1B0GTK5 79 aa4.78□□□□□ -1.64
TMEM39A-210ENST00000490099 FAM236CP0DP71 79 aa4.78□□□□□ -1.64
TMEM39A-210ENST00000490099 SPINK7P58062 85 aa4.78□□□□□ -1.64
TMEM39A-210ENST00000490099 TP53AIP1Q9HCN2 124 aa4.78□□□□□ -1.64
TMEM39A-210ENST00000490099 SMIM20Q8N5G0 67 aa4.77□□□□□ -1.65
TMEM39A-210ENST00000490099 SSPOA2VEC9 5147 aa4.76□□□□□ -1.65
TMEM39A-210ENST00000490099 ATOX1O00244 68 aa4.76□□□□□ -1.65
TMEM39A-210ENST00000490099 UQCRQO14949 82 aa4.73□□□□□ -1.65
TMEM39A-210ENST00000490099 KRTAP10-10P60014 251 aa4.72□□□□□ -1.65
TMEM39A-210ENST00000490099 OCR1Q9BZK8 76 aa4.71□□□□□ -1.66
TMEM39A-210ENST00000490099 TRAV7A0A075B6U4 112 aa4.7□□□□□ -1.66
TMEM39A-210ENST00000490099 TRAV22A0A0B4J277 110 aa4.7□□□□□ -1.66
TMEM39A-210ENST00000490099 C5orf47Q569G3 176 aa4.69□□□□□ -1.66
TMEM39A-210ENST00000490099 FCGBPQ9Y6R7 5405 aaPredicted RBP4.68□□□□□ -1.66
TMEM39A-210ENST00000490099 MP68P56378 58 aa4.68□□□□□ -1.66
TMEM39A-210ENST00000490099 H0Y9P7 68 aa4.67□□□□□ -1.66
TMEM39A-210ENST00000490099 SERP2Q8N6R1 65 aa4.67□□□□□ -1.66
TMEM39A-210ENST00000490099 H3BPC8 53 aa4.66□□□□□ -1.66
TMEM39A-210ENST00000490099 ANAPC13Q9BS18 74 aa4.66□□□□□ -1.66
TMEM39A-210ENST00000490099 Q5W150 140 aa4.65□□□□□ -1.67
TMEM39A-210ENST00000490099 LOC101927531A0A1B0GV80 90 aa4.64□□□□□ -1.67
TMEM39A-210ENST00000490099 C7orf65Q6ZTY9 151 aa4.63□□□□□ -1.67
TMEM39A-210ENST00000490099 COX7CP15954 63 aa4.62□□□□□ -1.67
TMEM39A-210ENST00000490099 C1orf64Q8NEQ6 169 aa4.62□□□□□ -1.67
TMEM39A-210ENST00000490099 LINC00208Q96KT6 92 aa4.62□□□□□ -1.67
TMEM39A-210ENST00000490099 IGKV2D-30A0A075B6S6 120 aa4.61□□□□□ -1.67
TMEM39A-210ENST00000490099 IGKV2-30P06310 120 aa4.61□□□□□ -1.67
TMEM39A-210ENST00000490099 KRTAP19-6Q3LI70 58 aa4.61□□□□□ -1.67
TMEM39A-210ENST00000490099 H1FX-AS1Q4G0G2 97 aa4.61□□□□□ -1.67
TMEM39A-210ENST00000490099 C20orf197Q8N268 126 aa4.58□□□□□ -1.68
TMEM39A-210ENST00000490099 CYP4F30PQ9H0H9 118 aa4.58□□□□□ -1.68
TMEM39A-210ENST00000490099 KLKP1Q107X0 134 aa4.56□□□□□ -1.68
TMEM39A-210ENST00000490099 NDUFC1O43677 76 aa4.54□□□□□ -1.68
TMEM39A-210ENST00000490099 SNURFQ9Y675 71 aa4.54□□□□□ -1.68
TMEM39A-210ENST00000490099 CCDC179H3BU77 68 aa4.5□□□□□ -1.69
TMEM39A-210ENST00000490099 C4orf26Q17RF5 130 aa4.5□□□□□ -1.69
TMEM39A-210ENST00000490099 PCP4P48539 62 aa4.49□□□□□ -1.69
TMEM39A-210ENST00000490099 SPANXA2-OT1Q8N9U9 137 aa4.48□□□□□ -1.69
TMEM39A-210ENST00000490099 MACF1Q9UPN3 7388 aaKnown RBP4.48□□□□□ -1.69
TMEM39A-210ENST00000490099 A8MUN3 132 aa4.47□□□□□ -1.69
TMEM39A-210ENST00000490099 SYNE2Q8WXH0 6885 aaKnown RBP4.45□□□□□ -1.7
TMEM39A-210ENST00000490099 H7BZZ5 65 aa4.45□□□□□ -1.7
TMEM39A-210ENST00000490099 ATP5EP56381 51 aaPredicted RBP4.43□□□□□ -1.7
TMEM39A-210ENST00000490099 TMEM258P61165 79 aa4.42□□□□□ -1.7
TMEM39A-210ENST00000490099 KRTAP6-3Q3LI67 103 aa4.42□□□□□ -1.7
TMEM39A-210ENST00000490099 DMAC1Q96GE9 116 aa4.42□□□□□ -1.7
TMEM39A-210ENST00000490099 CYSTM1Q9H1C7 97 aa4.42□□□□□ -1.7
TMEM39A-210ENST00000490099 SPRR2GQ9BYE4 73 aa4.41□□□□□ -1.7
TMEM39A-210ENST00000490099 MT1BP07438 61 aa4.4□□□□□ -1.71
TMEM39A-210ENST00000490099 ACYP2P14621 99 aa4.4□□□□□ -1.71
TMEM39A-210ENST00000490099 KRTAP19-8Q3LI54 63 aa4.4□□□□□ -1.71
TMEM39A-210ENST00000490099 CSAG1Q6PB30 78 aa4.4□□□□□ -1.71
TMEM39A-210ENST00000490099 LCA10Q71F78 164 aa4.39□□□□□ -1.71
TMEM39A-210ENST00000490099 S4R3F8 94 aa4.39□□□□□ -1.71
TMEM39A-210ENST00000490099 CHKB-CPT1BH3BT56 60 aa4.34□□□□□ -1.71
TMEM39A-210ENST00000490099 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
TMEM39A-210ENST00000490099 Q5VV11 94 aa4.33□□□□□ -1.72
TMEM39A-210ENST00000490099 SPTSSBQ8NFR3 76 aa4.33□□□□□ -1.72
TMEM39A-210ENST00000490099 A6NN06 94 aa4.31□□□□□ -1.72
TMEM39A-210ENST00000490099 KRTAP10-5P60370 271 aa4.31□□□□□ -1.72
TMEM39A-210ENST00000490099 COA5Q86WW8 74 aa4.31□□□□□ -1.72
TMEM39A-210ENST00000490099 A0A0A0MQY5 61 aa4.3□□□□□ -1.72
TMEM39A-210ENST00000490099 CRIPTQ9P021 101 aa4.28□□□□□ -1.72
TMEM39A-210ENST00000490099 SERP1Q9Y6X1 66 aa4.27□□□□□ -1.73
TMEM39A-210ENST00000490099 H0YAA0 97 aa4.25□□□□□ -1.73
TMEM39A-210ENST00000490099 NEBP20929 6669 aa4.22□□□□□ -1.73
TMEM39A-210ENST00000490099 KRTAP20-1Q3LI63 56 aa4.22□□□□□ -1.73
TMEM39A-210ENST00000490099 KRTAP5-9P26371 169 aa4.21□□□□□ -1.74
TMEM39A-210ENST00000490099 RPS28P62857 69 aaKnown RBP4.19□□□□□ -1.74
TMEM39A-210ENST00000490099 SEC61GP60059 68 aa4.16□□□□□ -1.74
TMEM39A-210ENST00000490099 MUC12Q9UKN1 5478 aa4.16□□□□□ -1.74
TMEM39A-210ENST00000490099 SMIM26A0A096LP01 95 aa4.14□□□□□ -1.75
TMEM39A-210ENST00000490099 V9GYY9 64 aa4.14□□□□□ -1.75
TMEM39A-210ENST00000490099 KMT2DO14686 5537 aa4.13□□□□□ -1.75
TMEM39A-210ENST00000490099 ADM2Q7Z4H4 148 aa4.13□□□□□ -1.75
TMEM39A-210ENST00000490099 PRR15LQ9BU68 103 aa4.12□□□□□ -1.75
TMEM39A-210ENST00000490099 MT1XP80297 61 aa4.11□□□□□ -1.75
TMEM39A-210ENST00000490099 A0A1B0GU69 56 aa4.1□□□□□ -1.75
TMEM39A-210ENST00000490099 LINC01558Q9Y6Z2 57 aa4.1□□□□□ -1.75
TMEM39A-210ENST00000490099 Q1T7F1 81 aa4.08□□□□□ -1.76
TMEM39A-210ENST00000490099 P0C880 135 aa4.06□□□□□ -1.76
TMEM39A-210ENST00000490099 PRO2289Q9P1D8 64 aa4.06□□□□□ -1.76
TMEM39A-210ENST00000490099 MDN1Q9NU22 5596 aa4.04□□□□□ -1.76
TMEM39A-210ENST00000490099 KRTAP12-2P59991 146 aa4.04□□□□□ -1.76
TMEM39A-210ENST00000490099 PLAC4Q8WY50 150 aa4.03□□□□□ -1.76
TMEM39A-210ENST00000490099 R4GN34 69 aa4.02□□□□□ -1.77
TMEM39A-210ENST00000490099 A0A1B0GU33 70 aa4.01□□□□□ -1.77
TMEM39A-210ENST00000490099 M0QZ58 72 aa4.01□□□□□ -1.77
TMEM39A-210ENST00000490099 KRTAP2-3P0C7H8 128 aa4.01□□□□□ -1.77
TMEM39A-210ENST00000490099 KRTAP2-4Q9BYR9 128 aa4.01□□□□□ -1.77
TMEM39A-210ENST00000490099 PSPHP1O15172 72 aa3.99□□□□□ -1.77
TMEM39A-210ENST00000490099 SPRR2FQ96RM1 72 aa3.99□□□□□ -1.77
TMEM39A-210ENST00000490099 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
TMEM39A-210ENST00000490099 UQCR11O14957 56 aa3.97□□□□□ -1.77
TMEM39A-210ENST00000490099 KRTAP8-1Q8IUC2 63 aa3.96□□□□□ -1.78
TMEM39A-210ENST00000490099 SPRR2EP22531 72 aa3.94□□□□□ -1.78
TMEM39A-210ENST00000490099 SPRR2BP35325 72 aa3.94□□□□□ -1.78
TMEM39A-210ENST00000490099 SPRR2AP35326 72 aa3.94□□□□□ -1.78
TMEM39A-210ENST00000490099 A6NED7 52 aa3.91□□□□□ -1.78
TMEM39A-210ENST00000490099 KRTAP10-12P60413 245 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms