RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 KRTAP10-5P60370 271 aa10.04□□□□□ -0.8
HOXA9-205ENST00000489695 KRTAP19-8Q3LI54 63 aa10.04□□□□□ -0.8
HOXA9-205ENST00000489695 C1orf64Q8NEQ6 169 aa10.01□□□□□ -0.81
HOXA9-205ENST00000489695 C5orf47Q569G3 176 aa10□□□□□ -0.81
HOXA9-205ENST00000489695 SPRR2GQ9BYE4 73 aa10□□□□□ -0.81
HOXA9-205ENST00000489695 S4R3F8 94 aa9.98□□□□□ -0.81
HOXA9-205ENST00000489695 FAM236AA0A1B0GUQ0 79 aa9.97□□□□□ -0.81
HOXA9-205ENST00000489695 FAM236BA0A1B0GV22 79 aa9.97□□□□□ -0.81
HOXA9-205ENST00000489695 CSAG1Q6PB30 78 aa9.94□□□□□ -0.82
HOXA9-205ENST00000489695 LCA10Q71F78 164 aa9.93□□□□□ -0.82
HOXA9-205ENST00000489695 KRTAP2-3P0C7H8 128 aa9.91□□□□□ -0.82
HOXA9-205ENST00000489695 KRTAP2-4Q9BYR9 128 aa9.91□□□□□ -0.82
HOXA9-205ENST00000489695 CYP4F30PQ9H0H9 118 aa9.89□□□□□ -0.83
HOXA9-205ENST00000489695 SCGB1A1P11684 91 aa9.87□□□□□ -0.83
HOXA9-205ENST00000489695 TRAV22A0A0B4J277 110 aa9.82□□□□□ -0.84
HOXA9-205ENST00000489695 KRTAP3-3Q9BYR6 98 aa9.82□□□□□ -0.84
HOXA9-205ENST00000489695 LOC101927531A0A1B0GV80 90 aa9.79□□□□□ -0.84
HOXA9-205ENST00000489695 OCR1Q9BZK8 76 aa9.78□□□□□ -0.84
HOXA9-205ENST00000489695 ATOX1O00244 68 aa9.76□□□□□ -0.85
HOXA9-205ENST00000489695 UQCRQO14949 82 aa9.76□□□□□ -0.85
HOXA9-205ENST00000489695 KLKP1Q107X0 134 aa9.74□□□□□ -0.85
HOXA9-205ENST00000489695 SMIM20Q8N5G0 67 aa9.72□□□□□ -0.85
HOXA9-205ENST00000489695 TRAV7A0A075B6U4 112 aa9.7□□□□□ -0.86
HOXA9-205ENST00000489695 H0Y9P7 68 aa9.67□□□□□ -0.86
HOXA9-205ENST00000489695 SPRR2EP22531 72 aa9.64□□□□□ -0.87
HOXA9-205ENST00000489695 SPRR2BP35325 72 aa9.64□□□□□ -0.87
HOXA9-205ENST00000489695 SPRR2AP35326 72 aa9.64□□□□□ -0.87
HOXA9-205ENST00000489695 SPRR2FQ96RM1 72 aa9.64□□□□□ -0.87
HOXA9-205ENST00000489695 SERP2Q8N6R1 65 aa9.63□□□□□ -0.87
HOXA9-205ENST00000489695 CRIPTQ9P021 101 aa9.63□□□□□ -0.87
HOXA9-205ENST00000489695 MP68P56378 58 aa9.62□□□□□ -0.87
HOXA9-205ENST00000489695 LINC00208Q96KT6 92 aa9.58□□□□□ -0.88
HOXA9-205ENST00000489695 ANAPC13Q9BS18 74 aa9.58□□□□□ -0.88
HOXA9-205ENST00000489695 H0YAA0 97 aa9.56□□□□□ -0.88
HOXA9-205ENST00000489695 KRTAP2-2Q9BYT5 123 aa9.56□□□□□ -0.88
HOXA9-205ENST00000489695 KRTAP2-1Q9BYU5 128 aa9.56□□□□□ -0.88
HOXA9-205ENST00000489695 NDUFC1O43677 76 aa9.55□□□□□ -0.88
HOXA9-205ENST00000489695 A8MUN3 132 aa9.54□□□□□ -0.88
HOXA9-205ENST00000489695 H3BPC8 53 aa9.54□□□□□ -0.88
HOXA9-205ENST00000489695 COX7CP15954 63 aa9.53□□□□□ -0.88
HOXA9-205ENST00000489695 C20orf197Q8N268 126 aa9.48□□□□□ -0.89
HOXA9-205ENST00000489695 LCE1AQ5T7P2 110 aa9.47□□□□□ -0.89
HOXA9-205ENST00000489695 SNURFQ9Y675 71 aa9.46□□□□□ -0.9
HOXA9-205ENST00000489695 KRTAP8-1Q8IUC2 63 aa9.4□□□□□ -0.9
HOXA9-205ENST00000489695 PRO2289Q9P1D8 64 aa9.39□□□□□ -0.91
HOXA9-205ENST00000489695 CCDC179H3BU77 68 aa9.38□□□□□ -0.91
HOXA9-205ENST00000489695 ADM2Q7Z4H4 148 aa9.38□□□□□ -0.91
HOXA9-205ENST00000489695 MT1XP80297 61 aa9.37□□□□□ -0.91
HOXA9-205ENST00000489695 SPRR2DP22532 72 aa9.32□□□□□ -0.92
HOXA9-205ENST00000489695 CYSTM1Q9H1C7 97 aa9.3□□□□□ -0.92
HOXA9-205ENST00000489695 KRTAP12-2P59991 146 aa9.27□□□□□ -0.93
HOXA9-205ENST00000489695 PCP4P48539 62 aa9.24□□□□□ -0.93
HOXA9-205ENST00000489695 DMAC1Q96GE9 116 aa9.24□□□□□ -0.93
HOXA9-205ENST00000489695 H7BZZ5 65 aa9.22□□□□□ -0.93
HOXA9-205ENST00000489695 SPANXA2-OT1Q8N9U9 137 aa9.18□□□□□ -0.94
HOXA9-205ENST00000489695 P0C880 135 aa9.17□□□□□ -0.94
HOXA9-205ENST00000489695 PLAC4Q8WY50 150 aa9.16□□□□□ -0.94
HOXA9-205ENST00000489695 KRTAP4-8A0A0G2JLE6 195 aa9.15□□□□□ -0.94
HOXA9-205ENST00000489695 KRTAP4-8Q9BYQ9 185 aa9.15□□□□□ -0.94
HOXA9-205ENST00000489695 R4GN34 69 aa9.14□□□□□ -0.95
HOXA9-205ENST00000489695 LCE3BQ5TA77 95 aa9.13□□□□□ -0.95
HOXA9-205ENST00000489695 KRTAP3-2Q9BYR7 98 aa9.12□□□□□ -0.95
HOXA9-205ENST00000489695 M0QZ58 72 aa9.06□□□□□ -0.96
HOXA9-205ENST00000489695 ACYP2P14621 99 aa9.05□□□□□ -0.96
HOXA9-205ENST00000489695 GPR98Q8WXG9 6306 aa9.04□□□□□ -0.96
HOXA9-205ENST00000489695 TMEM258P61165 79 aa9.03□□□□□ -0.96
HOXA9-205ENST00000489695 ATP5EP56381 51 aaPredicted RBP8.99□□□□□ -0.97
HOXA9-205ENST00000489695 CHKB-CPT1BH3BT56 60 aa8.92□□□□□ -0.98
HOXA9-205ENST00000489695 COA5Q86WW8 74 aa8.92□□□□□ -0.98
HOXA9-205ENST00000489695 KRTAP10-7P60409 375 aaPredicted RBP8.91□□□□□ -0.98
HOXA9-205ENST00000489695 LINC01554Q52M75 96 aa8.9□□□□□ -0.98
HOXA9-205ENST00000489695 KRTAP10-12P60413 245 aa8.89□□□□□ -0.99
HOXA9-205ENST00000489695 SPTSSBQ8NFR3 76 aa8.88□□□□□ -0.99
HOXA9-205ENST00000489695 DSTQ03001 7570 aaKnown RBP8.82□□□□□ -1
HOXA9-205ENST00000489695 SERP1Q9Y6X1 66 aa8.76□□□□□ -1.01
HOXA9-205ENST00000489695 KRTAP4-9Q9BYQ8 210 aa8.66□□□□□ -1.02
HOXA9-205ENST00000489695 RPS28P62857 69 aaKnown RBP8.57□□□□□ -1.04
HOXA9-205ENST00000489695 KRTAP13-4Q3LI77 160 aa8.54□□□□□ -1.04
HOXA9-205ENST00000489695 LCE5AQ5TCM9 118 aa8.52□□□□□ -1.05
HOXA9-205ENST00000489695 SEC61GP60059 68 aa8.49□□□□□ -1.05
HOXA9-205ENST00000489695 SMIM26A0A096LP01 95 aa8.48□□□□□ -1.05
HOXA9-205ENST00000489695 LINC01558Q9Y6Z2 57 aa8.46□□□□□ -1.06
HOXA9-205ENST00000489695 A0A1B0GU69 56 aa8.44□□□□□ -1.06
HOXA9-205ENST00000489695 LCE1DQ5T752 114 aa8.4□□□□□ -1.06
HOXA9-205ENST00000489695 KRTAP19-7Q3SYF9 63 aa8.39□□□□□ -1.07
HOXA9-205ENST00000489695 KRTAP19-3Q7Z4W3 81 aa8.39□□□□□ -1.07
HOXA9-205ENST00000489695 V9GYY9 64 aa8.39□□□□□ -1.07
HOXA9-205ENST00000489695 Q1T7F1 81 aa8.38□□□□□ -1.07
HOXA9-205ENST00000489695 PRR15LQ9BU68 103 aa8.38□□□□□ -1.07
HOXA9-205ENST00000489695 CAMK2N1Q7Z7J9 78 aa8.37□□□□□ -1.07
HOXA9-205ENST00000489695 MT1EP04732 61 aa8.33□□□□□ -1.08
HOXA9-205ENST00000489695 HMCN1Q96RW7 5635 aa8.33□□□□□ -1.08
HOXA9-205ENST00000489695 A0A1B0GU33 70 aa8.28□□□□□ -1.08
HOXA9-205ENST00000489695 PSPHP1O15172 72 aa8.27□□□□□ -1.09
HOXA9-205ENST00000489695 LCE4AQ5TA78 99 aa8.22□□□□□ -1.09
HOXA9-205ENST00000489695 AHNAK2Q8IVF2 5795 aa8.21□□□□□ -1.1
HOXA9-205ENST00000489695 A0A0D9SG42 100 aa8.21□□□□□ -1.1
HOXA9-205ENST00000489695 MT4P47944 62 aa8.2□□□□□ -1.1
HOXA9-205ENST00000489695 SPATA8Q6RVD6 105 aa8.2□□□□□ -1.1
HOXA9-205ENST00000489695 MT1GP13640 62 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms