RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 MT1HL1P0DM35 61 aa4.78□□□□□ -1.64
VTI1A-207ENST00000489357 C4orf26Q17RF5 130 aa4.78□□□□□ -1.64
VTI1A-207ENST00000489357 IGKV2-30P06310 120 aa4.76□□□□□ -1.65
VTI1A-207ENST00000489357 KRTAP10-8P60410 259 aa4.76□□□□□ -1.65
VTI1A-207ENST00000489357 PRR26Q8N8Z3 221 aa4.75□□□□□ -1.65
VTI1A-207ENST00000489357 PRR4Q16378 134 aa4.74□□□□□ -1.65
VTI1A-207ENST00000489357 PCOTHQ58A44 107 aa4.74□□□□□ -1.65
VTI1A-207ENST00000489357 Q5W150 140 aa4.74□□□□□ -1.65
VTI1A-207ENST00000489357 A0A0A0MQY5 61 aa4.73□□□□□ -1.65
VTI1A-207ENST00000489357 COA5Q86WW8 74 aa4.73□□□□□ -1.65
VTI1A-207ENST00000489357 ACYP2P14621 99 aa4.71□□□□□ -1.66
VTI1A-207ENST00000489357 DMAC1Q96GE9 116 aa4.7□□□□□ -1.66
VTI1A-207ENST00000489357 PRO0628Q9UI54 55 aa4.69□□□□□ -1.66
VTI1A-207ENST00000489357 C20orf166-AS1Q96NR2 134 aa4.68□□□□□ -1.66
VTI1A-207ENST00000489357 HRES1P13985 223 aa4.67□□□□□ -1.66
VTI1A-207ENST00000489357 A8MUN3 132 aa4.66□□□□□ -1.66
VTI1A-207ENST00000489357 A8MUU9 505 aa4.66□□□□□ -1.66
VTI1A-207ENST00000489357 C7orf65Q6ZTY9 151 aa4.66□□□□□ -1.66
VTI1A-207ENST00000489357 UBR4Q5T4S7 5183 aa4.65□□□□□ -1.66
VTI1A-207ENST00000489357 LINC01558Q9Y6Z2 57 aa4.65□□□□□ -1.67
VTI1A-207ENST00000489357 Q75L30 129 aa4.63□□□□□ -1.67
VTI1A-207ENST00000489357 HMCN2Q8NDA2 5059 aa4.62□□□□□ -1.67
VTI1A-207ENST00000489357 IGKV2D-30A0A075B6S6 120 aa4.62□□□□□ -1.67
VTI1A-207ENST00000489357 CHKB-CPT1BH3BT56 60 aa4.61□□□□□ -1.67
VTI1A-207ENST00000489357 PSPHP1O15172 72 aa4.6□□□□□ -1.67
VTI1A-207ENST00000489357 Q5VV11 94 aa4.6□□□□□ -1.67
VTI1A-207ENST00000489357 BRK1Q8WUW1 75 aa4.6□□□□□ -1.67
VTI1A-207ENST00000489357 PRR15LQ9BU68 103 aa4.59□□□□□ -1.67
VTI1A-207ENST00000489357 RETNLBQ9BQ08 111 aa4.57□□□□□ -1.68
VTI1A-207ENST00000489357 SPTSSBQ8NFR3 76 aa4.56□□□□□ -1.68
VTI1A-207ENST00000489357 C9orf92A6NGG3 77 aa4.54□□□□□ -1.68
VTI1A-207ENST00000489357 LRP2P98164 4655 aa4.52□□□□□ -1.69
VTI1A-207ENST00000489357 A6NED7 52 aa4.52□□□□□ -1.69
VTI1A-207ENST00000489357 SPINK7P58062 85 aa4.51□□□□□ -1.69
VTI1A-207ENST00000489357 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
VTI1A-207ENST00000489357 ATP11AUNQ6ZP68 121 aa4.51□□□□□ -1.69
VTI1A-207ENST00000489357 CDC42SE1Q9NRR8 79 aa4.51□□□□□ -1.69
VTI1A-207ENST00000489357 A0A1B0GU69 56 aa4.5□□□□□ -1.69
VTI1A-207ENST00000489357 LPAP08519 4548 aa4.5□□□□□ -1.69
VTI1A-207ENST00000489357 RPL37P61927 97 aaKnown RBP4.49□□□□□ -1.69
VTI1A-207ENST00000489357 COX6B2Q6YFQ2 88 aa4.46□□□□□ -1.7
VTI1A-207ENST00000489357 SEC61GP60059 68 aa4.45□□□□□ -1.7
VTI1A-207ENST00000489357 TPRXLQ17RH7 258 aa4.44□□□□□ -1.7
VTI1A-207ENST00000489357 LCA10Q71F78 164 aa4.44□□□□□ -1.7
VTI1A-207ENST00000489357 UQCR11O14957 56 aa4.43□□□□□ -1.7
VTI1A-207ENST00000489357 RNF213Q63HN8 5207 aa4.4□□□□□ -1.7
VTI1A-207ENST00000489357 SEC61BP60468 96 aaKnown RBP4.4□□□□□ -1.71
VTI1A-207ENST00000489357 SPATA8Q6RVD6 105 aa4.4□□□□□ -1.71
VTI1A-207ENST00000489357 MUC17Q685J3 4493 aa4.39□□□□□ -1.71
VTI1A-207ENST00000489357 PMAIP1Q13794 54 aa4.39□□□□□ -1.71
VTI1A-207ENST00000489357 MIR22HGQ0VDD5 57 aa4.36□□□□□ -1.71
VTI1A-207ENST00000489357 A6NN06 94 aa4.33□□□□□ -1.72
VTI1A-207ENST00000489357 A8MU10 97 aa4.33□□□□□ -1.72
VTI1A-207ENST00000489357 KTN1-AS1Q86SY8 53 aa4.3□□□□□ -1.72
VTI1A-207ENST00000489357 MUC2Q02817 5179 aa4.29□□□□□ -1.72
VTI1A-207ENST00000489357 A0A1B0GU33 70 aa4.29□□□□□ -1.72
VTI1A-207ENST00000489357 H1FX-AS1Q4G0G2 97 aa4.29□□□□□ -1.72
VTI1A-207ENST00000489357 RBM12B-AS1Q9P1G2 102 aa4.29□□□□□ -1.72
VTI1A-207ENST00000489357 S4R3F8 94 aa4.29□□□□□ -1.72
VTI1A-207ENST00000489357 KRTAP4-1Q9BYQ7 146 aa4.25□□□□□ -1.73
VTI1A-207ENST00000489357 H0YAA0 97 aa4.22□□□□□ -1.73
VTI1A-207ENST00000489357 K7ERS5 55 aa4.2□□□□□ -1.74
VTI1A-207ENST00000489357 CSAG1Q6PB30 78 aa4.2□□□□□ -1.74
VTI1A-207ENST00000489357 FAT4Q6V0I7 4981 aa4.19□□□□□ -1.74
VTI1A-207ENST00000489357 KRTAP10-6P60371 365 aaPredicted RBP4.18□□□□□ -1.74
VTI1A-207ENST00000489357 KRTAP19-2Q3LHN2 52 aa4.18□□□□□ -1.74
VTI1A-207ENST00000489357 KRTAP2-2Q9BYT5 123 aa4.15□□□□□ -1.75
VTI1A-207ENST00000489357 MT3P25713 68 aa4.14□□□□□ -1.75
VTI1A-207ENST00000489357 M0QZ58 72 aa4.13□□□□□ -1.75
VTI1A-207ENST00000489357 ADM2Q7Z4H4 148 aa4.09□□□□□ -1.75
VTI1A-207ENST00000489357 FLGP20930 4061 aaPredicted RBP4.09□□□□□ -1.76
VTI1A-207ENST00000489357 P0C880 135 aa4.07□□□□□ -1.76
VTI1A-207ENST00000489357 KRTAP13-4Q3LI77 160 aa4.04□□□□□ -1.76
VTI1A-207ENST00000489357 MT1HP80294 61 aa4.03□□□□□ -1.76
VTI1A-207ENST00000489357 ROMO1P60602 79 aa4□□□□□ -1.77
VTI1A-207ENST00000489357 A0A0D9SG42 100 aa3.98□□□□□ -1.77
VTI1A-207ENST00000489357 PRAC1Q96KF2 57 aa3.98□□□□□ -1.77
VTI1A-207ENST00000489357 R4GN34 69 aa3.97□□□□□ -1.77
VTI1A-207ENST00000489357 KRTAP12-1P59990 96 aa3.96□□□□□ -1.78
VTI1A-207ENST00000489357 CRIPTQ9P021 101 aa3.96□□□□□ -1.78
VTI1A-207ENST00000489357 KRTAP25-1Q3LHN0 102 aa3.95□□□□□ -1.78
VTI1A-207ENST00000489357 LINC01554Q52M75 96 aa3.95□□□□□ -1.78
VTI1A-207ENST00000489357 M0R2T5 61 aa3.93□□□□□ -1.78
VTI1A-207ENST00000489357 KRTAP12-2P59991 146 aa3.92□□□□□ -1.78
VTI1A-207ENST00000489357 SPINT4Q6UDR6 99 aa3.9□□□□□ -1.79
VTI1A-207ENST00000489357 FSIP2Q5CZC0 6907 aa3.9□□□□□ -1.79
VTI1A-207ENST00000489357 CRCT1Q9UGL9 99 aa3.89□□□□□ -1.79
VTI1A-207ENST00000489357 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
VTI1A-207ENST00000489357 MT2AP02795 61 aa3.8□□□□□ -1.8
VTI1A-207ENST00000489357 KRTAP10-7P60409 375 aaPredicted RBP3.78□□□□□ -1.8
VTI1A-207ENST00000489357 MT1FP04733 61 aa3.77□□□□□ -1.81
VTI1A-207ENST00000489357 SPRR2GQ9BYE4 73 aa3.75□□□□□ -1.81
VTI1A-207ENST00000489357 CAMK2N1Q7Z7J9 78 aa3.74□□□□□ -1.81
VTI1A-207ENST00000489357 PP632Q6XCG6 107 aa3.73□□□□□ -1.81
VTI1A-207ENST00000489357 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
VTI1A-207ENST00000489357 C10orf95Q9H7T3 257 aa3.71□□□□□ -1.82
VTI1A-207ENST00000489357 KRTAP10-10P60014 251 aa3.7□□□□□ -1.82
VTI1A-207ENST00000489357 USH2AO75445 5202 aa3.69□□□□□ -1.82
VTI1A-207ENST00000489357 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
VTI1A-207ENST00000489357 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms