RNA–Protein interactions for RNA: ENST00000489274.1

NINJ1-204, Transcript of ninjurin 1, humanhuman

TSL 2

Gene NINJ1, Length 2,026 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-204ENST00000489274 A6NED7 52 aa7.54□□□□□ -1.2
NINJ1-204ENST00000489274 J3QL48 77 aa7.48□□□□□ -1.21
NINJ1-204ENST00000489274 LCA10Q71F78 164 aa7.47□□□□□ -1.21
NINJ1-204ENST00000489274 CDC42SE1Q9NRR8 79 aa7.46□□□□□ -1.22
NINJ1-204ENST00000489274 A8MU10 97 aa7.44□□□□□ -1.22
NINJ1-204ENST00000489274 LRP2P98164 4655 aa7.38□□□□□ -1.23
NINJ1-204ENST00000489274 UQCR11O14957 56 aa7.37□□□□□ -1.23
NINJ1-204ENST00000489274 KRTAP3-3Q9BYR6 98 aa7.35□□□□□ -1.23
NINJ1-204ENST00000489274 SEC61BP60468 96 aaKnown RBP7.35□□□□□ -1.23
NINJ1-204ENST00000489274 SPATA8Q6RVD6 105 aa7.35□□□□□ -1.23
NINJ1-204ENST00000489274 H1FX-AS1Q4G0G2 97 aa7.34□□□□□ -1.23
NINJ1-204ENST00000489274 LPAP08519 4548 aa7.34□□□□□ -1.23
NINJ1-204ENST00000489274 RBM12B-AS1Q9P1G2 102 aa7.34□□□□□ -1.24
NINJ1-204ENST00000489274 HERC1Q15751 4861 aa7.33□□□□□ -1.24
NINJ1-204ENST00000489274 S4R3F8 94 aa7.33□□□□□ -1.24
NINJ1-204ENST00000489274 MIR22HGQ0VDD5 57 aa7.31□□□□□ -1.24
NINJ1-204ENST00000489274 KTN1-AS1Q86SY8 53 aa7.3□□□□□ -1.24
NINJ1-204ENST00000489274 A0A1B0GU33 70 aa7.24□□□□□ -1.25
NINJ1-204ENST00000489274 H3BS24 57 aa7.22□□□□□ -1.25
NINJ1-204ENST00000489274 A6NN06 94 aa7.18□□□□□ -1.26
NINJ1-204ENST00000489274 KRTAP4-1Q9BYQ7 146 aa7.18□□□□□ -1.26
NINJ1-204ENST00000489274 KRTAP10-6P60371 365 aaPredicted RBP7.17□□□□□ -1.26
NINJ1-204ENST00000489274 H0YAA0 97 aa7.17□□□□□ -1.26
NINJ1-204ENST00000489274 KRTAP3-2Q9BYR7 98 aa7.17□□□□□ -1.26
NINJ1-204ENST00000489274 MUC17Q685J3 4493 aa7.16□□□□□ -1.26
NINJ1-204ENST00000489274 CSAG1Q6PB30 78 aa7.15□□□□□ -1.26
NINJ1-204ENST00000489274 KRTAP19-2Q3LHN2 52 aa7.06□□□□□ -1.28
NINJ1-204ENST00000489274 P0C880 135 aa7.05□□□□□ -1.28
NINJ1-204ENST00000489274 ADM2Q7Z4H4 148 aa7.05□□□□□ -1.28
NINJ1-204ENST00000489274 KRTAP13-4Q3LI77 160 aa7□□□□□ -1.29
NINJ1-204ENST00000489274 HMCN2Q8NDA2 5059 aa6.99□□□□□ -1.29
NINJ1-204ENST00000489274 UBR4Q5T4S7 5183 aa6.94□□□□□ -1.3
NINJ1-204ENST00000489274 K7ERS5 55 aa6.92□□□□□ -1.3
NINJ1-204ENST00000489274 M0QZ58 72 aa6.91□□□□□ -1.3
NINJ1-204ENST00000489274 A0A0D9SG42 100 aa6.88□□□□□ -1.31
NINJ1-204ENST00000489274 LINC01554Q52M75 96 aa6.86□□□□□ -1.31
NINJ1-204ENST00000489274 FLGP20930 4061 aaPredicted RBP6.83□□□□□ -1.32
NINJ1-204ENST00000489274 MUC2Q02817 5179 aa6.81□□□□□ -1.32
NINJ1-204ENST00000489274 LCE2CQ5TA81 110 aa6.77□□□□□ -1.32
NINJ1-204ENST00000489274 R4GN34 69 aa6.77□□□□□ -1.33
NINJ1-204ENST00000489274 RNF213Q63HN8 5207 aa6.76□□□□□ -1.33
NINJ1-204ENST00000489274 PRAC1Q96KF2 57 aa6.76□□□□□ -1.33
NINJ1-204ENST00000489274 KRTAP12-1P59990 96 aa6.75□□□□□ -1.33
NINJ1-204ENST00000489274 KRTAP12-2P59991 146 aa6.74□□□□□ -1.33
NINJ1-204ENST00000489274 LORP23490 312 aaPredicted RBP6.73□□□□□ -1.33
NINJ1-204ENST00000489274 SPINT4Q6UDR6 99 aa6.7□□□□□ -1.34
NINJ1-204ENST00000489274 ROMO1P60602 79 aa6.69□□□□□ -1.34
NINJ1-204ENST00000489274 CRIPTQ9P021 101 aa6.64□□□□□ -1.35
NINJ1-204ENST00000489274 MT1HP80294 61 aa6.6□□□□□ -1.35
NINJ1-204ENST00000489274 KRTAP25-1Q3LHN0 102 aa6.55□□□□□ -1.36
NINJ1-204ENST00000489274 M0R2T5 61 aa6.54□□□□□ -1.36
NINJ1-204ENST00000489274 FAT4Q6V0I7 4981 aa6.52□□□□□ -1.37
NINJ1-204ENST00000489274 A0A0A0MQY5 61 aa6.5□□□□□ -1.37
NINJ1-204ENST00000489274 SPRR2GQ9BYE4 73 aa6.43□□□□□ -1.38
NINJ1-204ENST00000489274 MT2AP02795 61 aa6.41□□□□□ -1.38
NINJ1-204ENST00000489274 KRTAP9-8Q9BYQ0 159 aa6.41□□□□□ -1.38
NINJ1-204ENST00000489274 KRTAP19-1Q8IUB9 90 aa6.38□□□□□ -1.39
NINJ1-204ENST00000489274 C10orf95Q9H7T3 257 aa6.38□□□□□ -1.39
NINJ1-204ENST00000489274 MT1FP04733 61 aa6.37□□□□□ -1.39
NINJ1-204ENST00000489274 CAMK2N1Q7Z7J9 78 aa6.37□□□□□ -1.39
NINJ1-204ENST00000489274 KRTAP10-10P60014 251 aa6.36□□□□□ -1.39
NINJ1-204ENST00000489274 PLAC4Q8WY50 150 aa6.26□□□□□ -1.41
NINJ1-204ENST00000489274 KRTAP19-8Q3LI54 63 aa6.22□□□□□ -1.41
NINJ1-204ENST00000489274 KRTAP9-3Q9BYQ3 159 aa6.17□□□□□ -1.42
NINJ1-204ENST00000489274 LCE2AQ5TA79 106 aaPredicted RBP6.15□□□□□ -1.42
NINJ1-204ENST00000489274 TNP1P09430 55 aa6.12□□□□□ -1.43
NINJ1-204ENST00000489274 MT1BP07438 61 aa6.11□□□□□ -1.43
NINJ1-204ENST00000489274 PP632Q6XCG6 107 aa6.11□□□□□ -1.43
NINJ1-204ENST00000489274 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
NINJ1-204ENST00000489274 KRTAP23-1A1A580 65 aa6.05□□□□□ -1.44
NINJ1-204ENST00000489274 KRTAP10-5P60370 271 aa5.97□□□□□ -1.45
NINJ1-204ENST00000489274 MT1XP80297 61 aa5.97□□□□□ -1.45
NINJ1-204ENST00000489274 LCE2BO14633 110 aa5.94□□□□□ -1.46
NINJ1-204ENST00000489274 NDUFAF8A1L188 74 aa5.92□□□□□ -1.46
NINJ1-204ENST00000489274 FSIP2Q5CZC0 6907 aa5.92□□□□□ -1.46
NINJ1-204ENST00000489274 KRTAP9-6A0A140TA67 174 aa5.89□□□□□ -1.47
NINJ1-204ENST00000489274 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
NINJ1-204ENST00000489274 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
NINJ1-204ENST00000489274 LUZP6Q538Z0 58 aa5.85□□□□□ -1.47
NINJ1-204ENST00000489274 LCE2DQ5TA82 110 aaPredicted RBP5.82□□□□□ -1.48
NINJ1-204ENST00000489274 LCE3AQ5TA76 89 aa5.81□□□□□ -1.48
NINJ1-204ENST00000489274 KRTAP10-7P60409 375 aaPredicted RBP5.74□□□□□ -1.49
NINJ1-204ENST00000489274 KRTAP10-12P60413 245 aa5.74□□□□□ -1.49
NINJ1-204ENST00000489274 KRTAP8-1Q8IUC2 63 aa5.73□□□□□ -1.49
NINJ1-204ENST00000489274 CRCT1Q9UGL9 99 aa5.72□□□□□ -1.49
NINJ1-204ENST00000489274 USH2AO75445 5202 aa5.68□□□□□ -1.5
NINJ1-204ENST00000489274 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
NINJ1-204ENST00000489274 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
NINJ1-204ENST00000489274 KRTAP19-6Q3LI70 58 aa5.52□□□□□ -1.53
NINJ1-204ENST00000489274 SSPOA2VEC9 5147 aa5.52□□□□□ -1.53
NINJ1-204ENST00000489274 KRTAP19-5Q3LI72 72 aa5.45□□□□□ -1.54
NINJ1-204ENST00000489274 KRTAP4-8A0A0G2JLE6 195 aa5.44□□□□□ -1.54
NINJ1-204ENST00000489274 KRTAP4-8Q9BYQ9 185 aa5.44□□□□□ -1.54
NINJ1-204ENST00000489274 FCGBPQ9Y6R7 5405 aaPredicted RBP5.39□□□□□ -1.55
NINJ1-204ENST00000489274 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.34□□□□□ -1.55
NINJ1-204ENST00000489274 KRTAP19-7Q3SYF9 63 aa5.33□□□□□ -1.56
NINJ1-204ENST00000489274 KMT2DO14686 5537 aa5.32□□□□□ -1.56
NINJ1-204ENST00000489274 KRTAP9-7A8MTY7 169 aa5.29□□□□□ -1.56
NINJ1-204ENST00000489274 SYNE2Q8WXH0 6885 aaKnown RBP5.25□□□□□ -1.57
NINJ1-204ENST00000489274 LCE3CQ5T5A8 94 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms