RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 MT2AP02795 61 aa4.27□□□□□ -1.73
SMKR1-202ENST00000488846 MT-ATP8P03928 68 aa4.27□□□□□ -1.73
SMKR1-202ENST00000488846 C1orf64Q8NEQ6 169 aa4.26□□□□□ -1.73
SMKR1-202ENST00000488846 C5orf47Q569G3 176 aa4.25□□□□□ -1.73
SMKR1-202ENST00000488846 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
SMKR1-202ENST00000488846 H3BPC8 53 aa4.23□□□□□ -1.73
SMKR1-202ENST00000488846 MT1FP04733 61 aa4.23□□□□□ -1.73
SMKR1-202ENST00000488846 MP68P56378 58 aa4.22□□□□□ -1.73
SMKR1-202ENST00000488846 LINC00208Q96KT6 92 aa4.22□□□□□ -1.73
SMKR1-202ENST00000488846 SCGB1A1P11684 91 aa4.21□□□□□ -1.74
SMKR1-202ENST00000488846 KLKP1Q107X0 134 aa4.2□□□□□ -1.74
SMKR1-202ENST00000488846 KRTAP9-3Q9BYQ3 159 aa4.2□□□□□ -1.74
SMKR1-202ENST00000488846 S4R3F8 94 aa4.19□□□□□ -1.74
SMKR1-202ENST00000488846 FAM236AA0A1B0GUQ0 79 aa4.18□□□□□ -1.74
SMKR1-202ENST00000488846 FAM236BA0A1B0GV22 79 aa4.18□□□□□ -1.74
SMKR1-202ENST00000488846 KRTAP10-10P60014 251 aa4.18□□□□□ -1.74
SMKR1-202ENST00000488846 LCA10Q71F78 164 aa4.18□□□□□ -1.74
SMKR1-202ENST00000488846 SMIM20Q8N5G0 67 aa4.18□□□□□ -1.74
SMKR1-202ENST00000488846 TRAV7A0A075B6U4 112 aa4.17□□□□□ -1.74
SMKR1-202ENST00000488846 A8MUN3 132 aa4.17□□□□□ -1.74
SMKR1-202ENST00000488846 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
SMKR1-202ENST00000488846 CSAG1Q6PB30 78 aa4.15□□□□□ -1.75
SMKR1-202ENST00000488846 FSIP2Q5CZC0 6907 aa4.15□□□□□ -1.75
SMKR1-202ENST00000488846 CRCT1Q9UGL9 99 aa4.13□□□□□ -1.75
SMKR1-202ENST00000488846 LCE5AQ5TCM9 118 aa4.12□□□□□ -1.75
SMKR1-202ENST00000488846 DMAC1Q96GE9 116 aa4.1□□□□□ -1.75
SMKR1-202ENST00000488846 SERP2Q8N6R1 65 aa4.09□□□□□ -1.75
SMKR1-202ENST00000488846 USH2AO75445 5202 aa4.08□□□□□ -1.76
SMKR1-202ENST00000488846 KRTAP23-1A1A580 65 aa4.08□□□□□ -1.76
SMKR1-202ENST00000488846 H0YAA0 97 aa4.07□□□□□ -1.76
SMKR1-202ENST00000488846 NDUFC1O43677 76 aa4.07□□□□□ -1.76
SMKR1-202ENST00000488846 SNURFQ9Y675 71 aa4.04□□□□□ -1.76
SMKR1-202ENST00000488846 C20orf197Q8N268 126 aa4.03□□□□□ -1.76
SMKR1-202ENST00000488846 SPRR2GQ9BYE4 73 aa4.03□□□□□ -1.76
SMKR1-202ENST00000488846 SSPOA2VEC9 5147 aa4.02□□□□□ -1.77
SMKR1-202ENST00000488846 ACYP2P14621 99 aa4.01□□□□□ -1.77
SMKR1-202ENST00000488846 SPANXA2-OT1Q8N9U9 137 aa4.01□□□□□ -1.77
SMKR1-202ENST00000488846 COX7CP15954 63 aa4□□□□□ -1.77
SMKR1-202ENST00000488846 CRIPTQ9P021 101 aa4□□□□□ -1.77
SMKR1-202ENST00000488846 KRTAP19-8Q3LI54 63 aa3.98□□□□□ -1.77
SMKR1-202ENST00000488846 KRTAP19-6Q3LI70 58 aa3.97□□□□□ -1.77
SMKR1-202ENST00000488846 MT1BP07438 61 aa3.95□□□□□ -1.78
SMKR1-202ENST00000488846 ADM2Q7Z4H4 148 aa3.95□□□□□ -1.78
SMKR1-202ENST00000488846 H7BZZ5 65 aa3.92□□□□□ -1.78
SMKR1-202ENST00000488846 SPTSSBQ8NFR3 76 aa3.92□□□□□ -1.78
SMKR1-202ENST00000488846 CYSTM1Q9H1C7 97 aa3.92□□□□□ -1.78
SMKR1-202ENST00000488846 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
SMKR1-202ENST00000488846 Q5VV11 94 aa3.91□□□□□ -1.78
SMKR1-202ENST00000488846 P0C880 135 aa3.9□□□□□ -1.79
SMKR1-202ENST00000488846 ANAPC13Q9BS18 74 aa3.9□□□□□ -1.79
SMKR1-202ENST00000488846 CHKB-CPT1BH3BT56 60 aa3.88□□□□□ -1.79
SMKR1-202ENST00000488846 COA5Q86WW8 74 aa3.86□□□□□ -1.79
SMKR1-202ENST00000488846 CCDC179H3BU77 68 aa3.84□□□□□ -1.79
SMKR1-202ENST00000488846 R4GN34 69 aa3.84□□□□□ -1.79
SMKR1-202ENST00000488846 KRTAP15-1Q3LI76 137 aa3.83□□□□□ -1.8
SMKR1-202ENST00000488846 KRTAP10-5P60370 271 aa3.82□□□□□ -1.8
SMKR1-202ENST00000488846 M0QZ58 72 aa3.81□□□□□ -1.8
SMKR1-202ENST00000488846 A6NN06 94 aa3.79□□□□□ -1.8
SMKR1-202ENST00000488846 MACF1Q9UPN3 7388 aaKnown RBP3.78□□□□□ -1.81
SMKR1-202ENST00000488846 ATP5EP56381 51 aaPredicted RBP3.77□□□□□ -1.81
SMKR1-202ENST00000488846 PLAC4Q8WY50 150 aa3.75□□□□□ -1.81
SMKR1-202ENST00000488846 KRTAP5-3Q6L8H2 238 aa3.74□□□□□ -1.81
SMKR1-202ENST00000488846 MT1XP80297 61 aa3.73□□□□□ -1.81
SMKR1-202ENST00000488846 TMEM258P61165 79 aa3.72□□□□□ -1.81
SMKR1-202ENST00000488846 KRTAP13-4Q3LI77 160 aa3.72□□□□□ -1.81
SMKR1-202ENST00000488846 SEC61GP60059 68 aa3.71□□□□□ -1.82
SMKR1-202ENST00000488846 LINC01554Q52M75 96 aa3.71□□□□□ -1.82
SMKR1-202ENST00000488846 PRO2289Q9P1D8 64 aa3.7□□□□□ -1.82
SMKR1-202ENST00000488846 SERP1Q9Y6X1 66 aa3.7□□□□□ -1.82
SMKR1-202ENST00000488846 SYNE2Q8WXH0 6885 aaKnown RBP3.69□□□□□ -1.82
SMKR1-202ENST00000488846 KRTAP6-3Q3LI67 103 aa3.66□□□□□ -1.82
SMKR1-202ENST00000488846 A0A1B0GU33 70 aa3.65□□□□□ -1.83
SMKR1-202ENST00000488846 A0A1B0GU69 56 aa3.64□□□□□ -1.83
SMKR1-202ENST00000488846 KRTAP12-2P59991 146 aa3.63□□□□□ -1.83
SMKR1-202ENST00000488846 LINC01558Q9Y6Z2 57 aa3.62□□□□□ -1.83
SMKR1-202ENST00000488846 SPATA8Q6RVD6 105 aa3.61□□□□□ -1.83
SMKR1-202ENST00000488846 KRTAP5-9P26371 169 aa3.59□□□□□ -1.83
SMKR1-202ENST00000488846 PRR15LQ9BU68 103 aa3.57□□□□□ -1.84
SMKR1-202ENST00000488846 A0A0D9SG42 100 aa3.56□□□□□ -1.84
SMKR1-202ENST00000488846 KRTAP12-1P59990 96 aa3.56□□□□□ -1.84
SMKR1-202ENST00000488846 KRTAP10-12P60413 245 aa3.56□□□□□ -1.84
SMKR1-202ENST00000488846 KRTAP10-7P60409 375 aaPredicted RBP3.55□□□□□ -1.84
SMKR1-202ENST00000488846 KMT2DO14686 5537 aa3.54□□□□□ -1.84
SMKR1-202ENST00000488846 SMIM26A0A096LP01 95 aa3.54□□□□□ -1.84
SMKR1-202ENST00000488846 CAMK2N1Q7Z7J9 78 aa3.53□□□□□ -1.84
SMKR1-202ENST00000488846 A8MU10 97 aa3.51□□□□□ -1.85
SMKR1-202ENST00000488846 PCP4P48539 62 aa3.51□□□□□ -1.85
SMKR1-202ENST00000488846 SPINT4Q6UDR6 99 aa3.5□□□□□ -1.85
SMKR1-202ENST00000488846 Q1T7F1 81 aa3.49□□□□□ -1.85
SMKR1-202ENST00000488846 KRTAP8-1Q8IUC2 63 aa3.49□□□□□ -1.85
SMKR1-202ENST00000488846 MUC12Q9UKN1 5478 aa3.49□□□□□ -1.85
SMKR1-202ENST00000488846 UQCR11O14957 56 aa3.48□□□□□ -1.85
SMKR1-202ENST00000488846 V9GYY9 64 aa3.48□□□□□ -1.85
SMKR1-202ENST00000488846 RPS28P62857 69 aaKnown RBP3.46□□□□□ -1.86
SMKR1-202ENST00000488846 SPRR2FQ96RM1 72 aa3.45□□□□□ -1.86
SMKR1-202ENST00000488846 NEBP20929 6669 aa3.45□□□□□ -1.86
SMKR1-202ENST00000488846 SVIPQ8NHG7 77 aa3.43□□□□□ -1.86
SMKR1-202ENST00000488846 MDN1Q9NU22 5596 aa3.41□□□□□ -1.86
SMKR1-202ENST00000488846 PSPHP1O15172 72 aa3.4□□□□□ -1.87
SMKR1-202ENST00000488846 MIR22HGQ0VDD5 57 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms