RNA–Protein interactions for RNA: ENST00000488743.6

SLC5A6-217, Transcript of solute carrier family 5 member 6, humanhuman

TSL 2

Gene SLC5A6, Length 3,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A6-217ENST00000488743 SMR3BP02814 79 aaPredicted RBP6.47□□□□□ -1.37
SLC5A6-217ENST00000488743 KRTAP10-1P60331 282 aa6.47□□□□□ -1.37
SLC5A6-217ENST00000488743 A0A0D9SG42 100 aa6.45□□□□□ -1.38
SLC5A6-217ENST00000488743 COX6B2Q6YFQ2 88 aa6.45□□□□□ -1.38
SLC5A6-217ENST00000488743 VPS13BQ7Z7G8 4022 aa6.44□□□□□ -1.38
SLC5A6-217ENST00000488743 A0A1B0GVY2 172 aa6.43□□□□□ -1.38
SLC5A6-217ENST00000488743 MYCBP2O75592 4640 aa6.42□□□□□ -1.38
SLC5A6-217ENST00000488743 HSPG2P98160 4391 aa6.41□□□□□ -1.38
SLC5A6-217ENST00000488743 RPL37P61927 97 aaKnown RBP6.41□□□□□ -1.38
SLC5A6-217ENST00000488743 RYR1P21817 5038 aa6.39□□□□□ -1.39
SLC5A6-217ENST00000488743 KRTAP17-1Q9BYP8 105 aa6.38□□□□□ -1.39
SLC5A6-217ENST00000488743 KRTAP13-2Q52LG2 175 aa6.38□□□□□ -1.39
SLC5A6-217ENST00000488743 BIRC6Q9NR09 4857 aa6.36□□□□□ -1.39
SLC5A6-217ENST00000488743 PCLOQ9Y6V0 5065 aa6.35□□□□□ -1.39
SLC5A6-217ENST00000488743 ABCA13Q86UQ4 5058 aa6.34□□□□□ -1.39
SLC5A6-217ENST00000488743 LRP1Q07954 4544 aaKnown RBP6.34□□□□□ -1.4
SLC5A6-217ENST00000488743 SEC61BP60468 96 aaKnown RBP6.31□□□□□ -1.4
SLC5A6-217ENST00000488743 KRTAP4-5Q9BYR2 181 aa6.3□□□□□ -1.4
SLC5A6-217ENST00000488743 HERC2O95714 4834 aa6.29□□□□□ -1.4
SLC5A6-217ENST00000488743 KRTAP1-4P0C5Y4 121 aa6.28□□□□□ -1.4
SLC5A6-217ENST00000488743 KRTAP3-1Q9BYR8 98 aa6.24□□□□□ -1.41
SLC5A6-217ENST00000488743 KRTAP13-4Q3LI77 160 aa6.24□□□□□ -1.41
SLC5A6-217ENST00000488743 HERC1Q15751 4861 aa6.21□□□□□ -1.41
SLC5A6-217ENST00000488743 Q5VSD8 79 aa6.19□□□□□ -1.42
SLC5A6-217ENST00000488743 S4R3F8 94 aa6.17□□□□□ -1.42
SLC5A6-217ENST00000488743 FAT3Q8TDW7 4589 aa6.16□□□□□ -1.42
SLC5A6-217ENST00000488743 KRTAP12-2P59991 146 aa6.12□□□□□ -1.43
SLC5A6-217ENST00000488743 KRTAP10-6P60371 365 aaPredicted RBP6.11□□□□□ -1.43
SLC5A6-217ENST00000488743 PLAC4Q8WY50 150 aa6.09□□□□□ -1.43
SLC5A6-217ENST00000488743 RPS29P62273 56 aaKnown RBP6.09□□□□□ -1.43
SLC5A6-217ENST00000488743 PKHD1L1Q86WI1 4243 aa6.08□□□□□ -1.44
SLC5A6-217ENST00000488743 KRTAP10-4P60372 401 aaPredicted RBP6.08□□□□□ -1.44
SLC5A6-217ENST00000488743 C9orf92A6NGG3 77 aa6.08□□□□□ -1.44
SLC5A6-217ENST00000488743 XP32Q5T750 250 aa6.04□□□□□ -1.44
SLC5A6-217ENST00000488743 KRTAP3-2Q9BYR7 98 aa6.02□□□□□ -1.45
SLC5A6-217ENST00000488743 TNXBP22105 4242 aa5.98□□□□□ -1.45
SLC5A6-217ENST00000488743 KRTAP12-1P59990 96 aa5.96□□□□□ -1.46
SLC5A6-217ENST00000488743 LRP2P98164 4655 aa5.93□□□□□ -1.46
SLC5A6-217ENST00000488743 LPAP08519 4548 aa5.92□□□□□ -1.46
SLC5A6-217ENST00000488743 J3QL48 77 aa5.92□□□□□ -1.46
SLC5A6-217ENST00000488743 UBR4Q5T4S7 5183 aa5.91□□□□□ -1.46
SLC5A6-217ENST00000488743 MUC2Q02817 5179 aa5.9□□□□□ -1.46
SLC5A6-217ENST00000488743 RNF213Q63HN8 5207 aa5.9□□□□□ -1.46
SLC5A6-217ENST00000488743 KRTAP3-3Q9BYR6 98 aa5.9□□□□□ -1.47
SLC5A6-217ENST00000488743 KRTAP10-8P60410 259 aa5.87□□□□□ -1.47
SLC5A6-217ENST00000488743 MT1HL1P0DM35 61 aa5.87□□□□□ -1.47
SLC5A6-217ENST00000488743 CAMK2N1Q7Z7J9 78 aa5.85□□□□□ -1.47
SLC5A6-217ENST00000488743 HMCN2Q8NDA2 5059 aa5.79□□□□□ -1.48
SLC5A6-217ENST00000488743 PRO2289Q9P1D8 64 aa5.67□□□□□ -1.5
SLC5A6-217ENST00000488743 M0QZ58 72 aa5.65□□□□□ -1.51
SLC5A6-217ENST00000488743 FAT4Q6V0I7 4981 aa5.59□□□□□ -1.52
SLC5A6-217ENST00000488743 R4GN34 69 aa5.57□□□□□ -1.52
SLC5A6-217ENST00000488743 PP632Q6XCG6 107 aa5.5□□□□□ -1.53
SLC5A6-217ENST00000488743 KRTAP4-1Q9BYQ7 146 aa5.36□□□□□ -1.55
SLC5A6-217ENST00000488743 INE1O15225 51 aa5.36□□□□□ -1.55
SLC5A6-217ENST00000488743 SPRR5A0A1B0GTR4 108 aa5.34□□□□□ -1.55
SLC5A6-217ENST00000488743 MUC17Q685J3 4493 aa5.29□□□□□ -1.56
SLC5A6-217ENST00000488743 LORP23490 312 aaPredicted RBP5.27□□□□□ -1.57
SLC5A6-217ENST00000488743 FSIP2Q5CZC0 6907 aa5.22□□□□□ -1.57
SLC5A6-217ENST00000488743 TNP1P09430 55 aa5.16□□□□□ -1.58
SLC5A6-217ENST00000488743 KRTAP19-2Q3LHN2 52 aa5.06□□□□□ -1.6
SLC5A6-217ENST00000488743 LCE2CQ5TA81 110 aa5.05□□□□□ -1.6
SLC5A6-217ENST00000488743 FLGP20930 4061 aaPredicted RBP5.05□□□□□ -1.6
SLC5A6-217ENST00000488743 M0R2T5 61 aa5.04□□□□□ -1.6
SLC5A6-217ENST00000488743 USH2AO75445 5202 aa5□□□□□ -1.61
SLC5A6-217ENST00000488743 MT1HP80294 61 aa4.98□□□□□ -1.61
SLC5A6-217ENST00000488743 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
SLC5A6-217ENST00000488743 LCE2AQ5TA79 106 aaPredicted RBP4.91□□□□□ -1.62
SLC5A6-217ENST00000488743 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
SLC5A6-217ENST00000488743 KRTAP10-10P60014 251 aa4.75□□□□□ -1.65
SLC5A6-217ENST00000488743 KRTAP9-8Q9BYQ0 159 aa4.75□□□□□ -1.65
SLC5A6-217ENST00000488743 MT1FP04733 61 aa4.73□□□□□ -1.65
SLC5A6-217ENST00000488743 MT2AP02795 61 aa4.71□□□□□ -1.65
SLC5A6-217ENST00000488743 SPRR2GQ9BYE4 73 aa4.68□□□□□ -1.66
SLC5A6-217ENST00000488743 SSPOA2VEC9 5147 aa4.66□□□□□ -1.66
SLC5A6-217ENST00000488743 KRTAP19-1Q8IUB9 90 aa4.66□□□□□ -1.66
SLC5A6-217ENST00000488743 KRTAP9-2Q9BYQ4 174 aa4.63□□□□□ -1.67
SLC5A6-217ENST00000488743 LCE2BO14633 110 aa4.57□□□□□ -1.68
SLC5A6-217ENST00000488743 KRTAP9-3Q9BYQ3 159 aa4.57□□□□□ -1.68
SLC5A6-217ENST00000488743 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
SLC5A6-217ENST00000488743 KRTAP8-1Q8IUC2 63 aa4.55□□□□□ -1.68
SLC5A6-217ENST00000488743 KRTAP12-3P60328 96 aa4.52□□□□□ -1.69
SLC5A6-217ENST00000488743 KMT2DO14686 5537 aa4.48□□□□□ -1.69
SLC5A6-217ENST00000488743 FCGBPQ9Y6R7 5405 aaPredicted RBP4.48□□□□□ -1.69
SLC5A6-217ENST00000488743 KRTAP19-8Q3LI54 63 aa4.46□□□□□ -1.7
SLC5A6-217ENST00000488743 SYNE2Q8WXH0 6885 aaKnown RBP4.43□□□□□ -1.7
SLC5A6-217ENST00000488743 LCE2DQ5TA82 110 aaPredicted RBP4.42□□□□□ -1.7
SLC5A6-217ENST00000488743 MT1BP07438 61 aa4.41□□□□□ -1.7
SLC5A6-217ENST00000488743 KRTAP10-5P60370 271 aa4.4□□□□□ -1.7
SLC5A6-217ENST00000488743 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.71
SLC5A6-217ENST00000488743 MT1XP80297 61 aa4.39□□□□□ -1.71
SLC5A6-217ENST00000488743 CRCT1Q9UGL9 99 aa4.39□□□□□ -1.71
SLC5A6-217ENST00000488743 KRTAP9-6A0A140TA67 174 aa4.31□□□□□ -1.72
SLC5A6-217ENST00000488743 KRTAP10-7P60409 375 aaPredicted RBP4.29□□□□□ -1.72
SLC5A6-217ENST00000488743 LCE3CQ5T5A8 94 aa4.25□□□□□ -1.73
SLC5A6-217ENST00000488743 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
SLC5A6-217ENST00000488743 KRTAP2-3P0C7H8 128 aa4.2□□□□□ -1.74
SLC5A6-217ENST00000488743 KRTAP2-4Q9BYR9 128 aa4.2□□□□□ -1.74
SLC5A6-217ENST00000488743 KRTAP2-1Q9BYU5 128 aa4.2□□□□□ -1.74
SLC5A6-217ENST00000488743 MUC12Q9UKN1 5478 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms