RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 CCDC179H3BU77 68 aa6.76□□□□□ -1.33
NUP188-207ENST00000487952 LORP23490 312 aaPredicted RBP6.76□□□□□ -1.33
NUP188-207ENST00000487952 H7BZZ5 65 aa6.73□□□□□ -1.33
NUP188-207ENST00000487952 CYSTM1Q9H1C7 97 aa6.72□□□□□ -1.33
NUP188-207ENST00000487952 KRTAP3-3Q9BYR6 98 aa6.7□□□□□ -1.34
NUP188-207ENST00000487952 CHKB-CPT1BH3BT56 60 aa6.69□□□□□ -1.34
NUP188-207ENST00000487952 KRTAP9-8Q9BYQ0 159 aa6.67□□□□□ -1.34
NUP188-207ENST00000487952 MT2AP02795 61 aa6.64□□□□□ -1.35
NUP188-207ENST00000487952 SPTSSBQ8NFR3 76 aa6.64□□□□□ -1.35
NUP188-207ENST00000487952 KRTAP10-10P60014 251 aa6.62□□□□□ -1.35
NUP188-207ENST00000487952 ATP5EP56381 51 aaPredicted RBP6.6□□□□□ -1.35
NUP188-207ENST00000487952 COA5Q86WW8 74 aa6.59□□□□□ -1.35
NUP188-207ENST00000487952 MT1FP04733 61 aa6.58□□□□□ -1.36
NUP188-207ENST00000487952 TMEM258P61165 79 aa6.56□□□□□ -1.36
NUP188-207ENST00000487952 H0YAA0 97 aa6.53□□□□□ -1.36
NUP188-207ENST00000487952 PCP4P48539 62 aa6.52□□□□□ -1.37
NUP188-207ENST00000487952 ADM2Q7Z4H4 148 aa6.51□□□□□ -1.37
NUP188-207ENST00000487952 LCE2DQ5TA82 110 aaPredicted RBP6.5□□□□□ -1.37
NUP188-207ENST00000487952 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
NUP188-207ENST00000487952 KRTAP9-2Q9BYQ4 174 aa6.45□□□□□ -1.38
NUP188-207ENST00000487952 CRIPTQ9P021 101 aa6.41□□□□□ -1.38
NUP188-207ENST00000487952 P0C880 135 aa6.39□□□□□ -1.39
NUP188-207ENST00000487952 SEC61GP60059 68 aa6.38□□□□□ -1.39
NUP188-207ENST00000487952 KRTAP3-2Q9BYR7 98 aa6.37□□□□□ -1.39
NUP188-207ENST00000487952 SERP1Q9Y6X1 66 aa6.36□□□□□ -1.39
NUP188-207ENST00000487952 LCE2BO14633 110 aa6.33□□□□□ -1.4
NUP188-207ENST00000487952 R4GN34 69 aa6.33□□□□□ -1.4
NUP188-207ENST00000487952 KRTAP19-1Q8IUB9 90 aa6.32□□□□□ -1.4
NUP188-207ENST00000487952 SPRR2GQ9BYE4 73 aa6.32□□□□□ -1.4
NUP188-207ENST00000487952 M0QZ58 72 aa6.29□□□□□ -1.4
NUP188-207ENST00000487952 A0A1B0GU69 56 aa6.27□□□□□ -1.41
NUP188-207ENST00000487952 Q5VV11 94 aa6.24□□□□□ -1.41
NUP188-207ENST00000487952 PRR15LQ9BU68 103 aa6.23□□□□□ -1.41
NUP188-207ENST00000487952 KRTAP19-8Q3LI54 63 aa6.21□□□□□ -1.42
NUP188-207ENST00000487952 LINC01558Q9Y6Z2 57 aa6.21□□□□□ -1.42
NUP188-207ENST00000487952 LINC01554Q52M75 96 aa6.19□□□□□ -1.42
NUP188-207ENST00000487952 A0A1B0GU33 70 aa6.18□□□□□ -1.42
NUP188-207ENST00000487952 USH2AO75445 5202 aa6.17□□□□□ -1.42
NUP188-207ENST00000487952 CRCT1Q9UGL9 99 aa6.17□□□□□ -1.42
NUP188-207ENST00000487952 V9GYY9 64 aa6.16□□□□□ -1.42
NUP188-207ENST00000487952 MT1BP07438 61 aa6.15□□□□□ -1.42
NUP188-207ENST00000487952 SMIM26A0A096LP01 95 aa6.14□□□□□ -1.43
NUP188-207ENST00000487952 RPS28P62857 69 aaKnown RBP6.14□□□□□ -1.43
NUP188-207ENST00000487952 KRTAP9-6A0A140TA67 174 aa6.11□□□□□ -1.43
NUP188-207ENST00000487952 KRTAP13-4Q3LI77 160 aa6.11□□□□□ -1.43
NUP188-207ENST00000487952 PLAC4Q8WY50 150 aa6.11□□□□□ -1.43
NUP188-207ENST00000487952 Q1T7F1 81 aa6.08□□□□□ -1.44
NUP188-207ENST00000487952 SPATA8Q6RVD6 105 aa6.08□□□□□ -1.44
NUP188-207ENST00000487952 FSIP2Q5CZC0 6907 aa6.08□□□□□ -1.44
NUP188-207ENST00000487952 KRTAP19-6Q3LI70 58 aa6.05□□□□□ -1.44
NUP188-207ENST00000487952 A0A0D9SG42 100 aa6.04□□□□□ -1.44
NUP188-207ENST00000487952 A6NN06 94 aa6.03□□□□□ -1.44
NUP188-207ENST00000487952 SSPOA2VEC9 5147 aa6.02□□□□□ -1.45
NUP188-207ENST00000487952 PSPHP1O15172 72 aa6.02□□□□□ -1.45
NUP188-207ENST00000487952 UQCR11O14957 56 aa6.01□□□□□ -1.45
NUP188-207ENST00000487952 KRTAP10-5P60370 271 aa5.94□□□□□ -1.46
NUP188-207ENST00000487952 SPINT4Q6UDR6 99 aa5.94□□□□□ -1.46
NUP188-207ENST00000487952 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
NUP188-207ENST00000487952 A8MU10 97 aa5.93□□□□□ -1.46
NUP188-207ENST00000487952 MIR22HGQ0VDD5 57 aa5.91□□□□□ -1.46
NUP188-207ENST00000487952 CAMK2N1Q7Z7J9 78 aa5.9□□□□□ -1.46
NUP188-207ENST00000487952 KRTAP12-1P59990 96 aa5.88□□□□□ -1.47
NUP188-207ENST00000487952 A6NED7 52 aa5.87□□□□□ -1.47
NUP188-207ENST00000487952 FCGBPQ9Y6R7 5405 aaPredicted RBP5.86□□□□□ -1.47
NUP188-207ENST00000487952 MT1XP80297 61 aa5.86□□□□□ -1.47
NUP188-207ENST00000487952 KRTAP12-2P59991 146 aa5.84□□□□□ -1.47
NUP188-207ENST00000487952 K7ERS5 55 aa5.77□□□□□ -1.49
NUP188-207ENST00000487952 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.72□□□□□ -1.49
NUP188-207ENST00000487952 CDC42SE1Q9NRR8 79 aa5.68□□□□□ -1.5
NUP188-207ENST00000487952 KRTAP10-7P60409 375 aaPredicted RBP5.61□□□□□ -1.51
NUP188-207ENST00000487952 KRTAP10-12P60413 245 aa5.57□□□□□ -1.52
NUP188-207ENST00000487952 C10orf95Q9H7T3 257 aa5.57□□□□□ -1.52
NUP188-207ENST00000487952 MACF1Q9UPN3 7388 aaKnown RBP5.56□□□□□ -1.52
NUP188-207ENST00000487952 KRTAP9-7A8MTY7 169 aa5.55□□□□□ -1.52
NUP188-207ENST00000487952 TNP1P09430 55 aa5.54□□□□□ -1.52
NUP188-207ENST00000487952 BRK1Q8WUW1 75 aa5.52□□□□□ -1.53
NUP188-207ENST00000487952 KRTAP6-3Q3LI67 103 aa5.49□□□□□ -1.53
NUP188-207ENST00000487952 KRTAP8-1Q8IUC2 63 aa5.49□□□□□ -1.53
NUP188-207ENST00000487952 KRTAP4-8A0A0G2JLE6 195 aa5.47□□□□□ -1.53
NUP188-207ENST00000487952 KRTAP4-8Q9BYQ9 185 aa5.47□□□□□ -1.53
NUP188-207ENST00000487952 SYNE2Q8WXH0 6885 aaKnown RBP5.44□□□□□ -1.54
NUP188-207ENST00000487952 KRTAP25-1Q3LHN0 102 aa5.42□□□□□ -1.54
NUP188-207ENST00000487952 ROMO1P60602 79 aa5.4□□□□□ -1.54
NUP188-207ENST00000487952 KMT2DO14686 5537 aa5.39□□□□□ -1.55
NUP188-207ENST00000487952 SVIPQ8NHG7 77 aa5.39□□□□□ -1.55
NUP188-207ENST00000487952 KRTAP5-9P26371 169 aa5.38□□□□□ -1.55
NUP188-207ENST00000487952 SPRR2FQ96RM1 72 aa5.37□□□□□ -1.55
NUP188-207ENST00000487952 LCE3AQ5TA76 89 aa5.33□□□□□ -1.56
NUP188-207ENST00000487952 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
NUP188-207ENST00000487952 KRTAP19-7Q3SYF9 63 aa5.23□□□□□ -1.57
NUP188-207ENST00000487952 KRTAP23-1A1A580 65 aa5.21□□□□□ -1.58
NUP188-207ENST00000487952 PMAIP1Q13794 54 aa5.21□□□□□ -1.58
NUP188-207ENST00000487952 SPRR2EP22531 72 aa5.2□□□□□ -1.58
NUP188-207ENST00000487952 SPRR2BP35325 72 aa5.2□□□□□ -1.58
NUP188-207ENST00000487952 SPRR2AP35326 72 aa5.2□□□□□ -1.58
NUP188-207ENST00000487952 MT1EP04732 61 aa5.18□□□□□ -1.58
NUP188-207ENST00000487952 PRO0628Q9UI54 55 aa5.18□□□□□ -1.58
NUP188-207ENST00000487952 PP632Q6XCG6 107 aa5.16□□□□□ -1.58
NUP188-207ENST00000487952 MUC12Q9UKN1 5478 aa5.16□□□□□ -1.58
NUP188-207ENST00000487952 LCE1AQ5T7P2 110 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 183.1 ms