RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 A8MU10 97 aa10.6□□□□□ -0.71
PHF1-209ENST00000487667 SEC61BP60468 96 aaKnown RBP10.56□□□□□ -0.72
PHF1-209ENST00000487667 SPTSSBQ8NFR3 76 aa10.56□□□□□ -0.72
PHF1-209ENST00000487667 LPAP08519 4548 aa10.54□□□□□ -0.72
PHF1-209ENST00000487667 A0A1B0GU69 56 aa10.54□□□□□ -0.72
PHF1-209ENST00000487667 PMAIP1Q13794 54 aa10.54□□□□□ -0.72
PHF1-209ENST00000487667 KRTAP3-1Q9BYR8 98 aa10.51□□□□□ -0.73
PHF1-209ENST00000487667 RBM12B-AS1Q9P1G2 102 aa10.41□□□□□ -0.74
PHF1-209ENST00000487667 HMCN2Q8NDA2 5059 aa10.41□□□□□ -0.74
PHF1-209ENST00000487667 A6NN06 94 aa10.41□□□□□ -0.74
PHF1-209ENST00000487667 LRP2P98164 4655 aa10.4□□□□□ -0.74
PHF1-209ENST00000487667 SPATA8Q6RVD6 105 aa10.37□□□□□ -0.75
PHF1-209ENST00000487667 UQCR11O14957 56 aa10.37□□□□□ -0.75
PHF1-209ENST00000487667 KTN1-AS1Q86SY8 53 aa10.33□□□□□ -0.76
PHF1-209ENST00000487667 H1FX-AS1Q4G0G2 97 aa10.32□□□□□ -0.76
PHF1-209ENST00000487667 SEC61GP60059 68 aa10.31□□□□□ -0.76
PHF1-209ENST00000487667 MIR22HGQ0VDD5 57 aa10.28□□□□□ -0.76
PHF1-209ENST00000487667 S4R3F8 94 aa10.27□□□□□ -0.76
PHF1-209ENST00000487667 MUC17Q685J3 4493 aa10.18□□□□□ -0.78
PHF1-209ENST00000487667 KRTAP3-3Q9BYR6 98 aa10.14□□□□□ -0.79
PHF1-209ENST00000487667 KRTAP4-1Q9BYQ7 146 aa10.09□□□□□ -0.79
PHF1-209ENST00000487667 CSAG1Q6PB30 78 aa10.06□□□□□ -0.8
PHF1-209ENST00000487667 A0A1B0GU33 70 aa10.02□□□□□ -0.81
PHF1-209ENST00000487667 UBR4Q5T4S7 5183 aa9.98□□□□□ -0.81
PHF1-209ENST00000487667 H0YAA0 97 aa9.96□□□□□ -0.81
PHF1-209ENST00000487667 MUC2Q02817 5179 aa9.93□□□□□ -0.82
PHF1-209ENST00000487667 KRTAP19-2Q3LHN2 52 aa9.9□□□□□ -0.82
PHF1-209ENST00000487667 RNF213Q63HN8 5207 aa9.86□□□□□ -0.83
PHF1-209ENST00000487667 KRTAP10-6P60371 365 aaPredicted RBP9.84□□□□□ -0.83
PHF1-209ENST00000487667 KRTAP3-2Q9BYR7 98 aa9.83□□□□□ -0.84
PHF1-209ENST00000487667 ADM2Q7Z4H4 148 aa9.8□□□□□ -0.84
PHF1-209ENST00000487667 PRAC1Q96KF2 57 aa9.76□□□□□ -0.85
PHF1-209ENST00000487667 K7ERS5 55 aa9.72□□□□□ -0.85
PHF1-209ENST00000487667 P0C880 135 aa9.71□□□□□ -0.86
PHF1-209ENST00000487667 M0QZ58 72 aa9.65□□□□□ -0.86
PHF1-209ENST00000487667 FLGP20930 4061 aaPredicted RBP9.63□□□□□ -0.87
PHF1-209ENST00000487667 LCE2CQ5TA81 110 aa9.62□□□□□ -0.87
PHF1-209ENST00000487667 KRTAP13-4Q3LI77 160 aa9.55□□□□□ -0.88
PHF1-209ENST00000487667 FAT4Q6V0I7 4981 aa9.53□□□□□ -0.88
PHF1-209ENST00000487667 LINC01554Q52M75 96 aa9.52□□□□□ -0.89
PHF1-209ENST00000487667 R4GN34 69 aa9.5□□□□□ -0.89
PHF1-209ENST00000487667 MT1HP80294 61 aa9.45□□□□□ -0.9
PHF1-209ENST00000487667 CRIPTQ9P021 101 aa9.44□□□□□ -0.9
PHF1-209ENST00000487667 A0A0D9SG42 100 aa9.43□□□□□ -0.9
PHF1-209ENST00000487667 M0R2T5 61 aa9.43□□□□□ -0.9
PHF1-209ENST00000487667 KRTAP25-1Q3LHN0 102 aa9.43□□□□□ -0.9
PHF1-209ENST00000487667 ROMO1P60602 79 aa9.42□□□□□ -0.9
PHF1-209ENST00000487667 LORP23490 312 aaPredicted RBP9.29□□□□□ -0.92
PHF1-209ENST00000487667 KRTAP12-1P59990 96 aa9.26□□□□□ -0.93
PHF1-209ENST00000487667 KRTAP12-2P59991 146 aa9.24□□□□□ -0.93
PHF1-209ENST00000487667 SPINT4Q6UDR6 99 aa9.24□□□□□ -0.93
PHF1-209ENST00000487667 LCE2AQ5TA79 106 aaPredicted RBP9.2□□□□□ -0.94
PHF1-209ENST00000487667 KRTAP9-8Q9BYQ0 159 aa9.1□□□□□ -0.95
PHF1-209ENST00000487667 MT2AP02795 61 aa9.09□□□□□ -0.95
PHF1-209ENST00000487667 SPRR2GQ9BYE4 73 aa9.08□□□□□ -0.96
PHF1-209ENST00000487667 KRTAP10-10P60014 251 aa9.07□□□□□ -0.96
PHF1-209ENST00000487667 MT1FP04733 61 aa9.02□□□□□ -0.97
PHF1-209ENST00000487667 KRTAP19-1Q8IUB9 90 aa8.95□□□□□ -0.98
PHF1-209ENST00000487667 CAMK2N1Q7Z7J9 78 aa8.92□□□□□ -0.98
PHF1-209ENST00000487667 PLAC4Q8WY50 150 aa8.88□□□□□ -0.99
PHF1-209ENST00000487667 C10orf95Q9H7T3 257 aa8.88□□□□□ -0.99
PHF1-209ENST00000487667 KRTAP9-2Q9BYQ4 174 aa8.83□□□□□ -1
PHF1-209ENST00000487667 KRTAP19-8Q3LI54 63 aa8.81□□□□□ -1
PHF1-209ENST00000487667 KRTAP9-3Q9BYQ3 159 aa8.78□□□□□ -1
PHF1-209ENST00000487667 MT1BP07438 61 aa8.6□□□□□ -1.03
PHF1-209ENST00000487667 LCE2DQ5TA82 110 aaPredicted RBP8.56□□□□□ -1.04
PHF1-209ENST00000487667 LCE2BO14633 110 aa8.55□□□□□ -1.04
PHF1-209ENST00000487667 TNP1P09430 55 aa8.55□□□□□ -1.04
PHF1-209ENST00000487667 KRTAP15-1Q3LI76 137 aa8.53□□□□□ -1.04
PHF1-209ENST00000487667 PP632Q6XCG6 107 aa8.52□□□□□ -1.04
PHF1-209ENST00000487667 KRTAP9-6A0A140TA67 174 aa8.5□□□□□ -1.05
PHF1-209ENST00000487667 PRO2289Q9P1D8 64 aa8.42□□□□□ -1.06
PHF1-209ENST00000487667 KRTAP23-1A1A580 65 aa8.42□□□□□ -1.06
PHF1-209ENST00000487667 MT1XP80297 61 aa8.37□□□□□ -1.07
PHF1-209ENST00000487667 KRTAP10-5P60370 271 aa8.36□□□□□ -1.07
PHF1-209ENST00000487667 USH2AO75445 5202 aa8.35□□□□□ -1.07
PHF1-209ENST00000487667 FSIP2Q5CZC0 6907 aa8.34□□□□□ -1.07
PHF1-209ENST00000487667 CRCT1Q9UGL9 99 aa8.32□□□□□ -1.08
PHF1-209ENST00000487667 H3BS24 57 aa8.29□□□□□ -1.08
PHF1-209ENST00000487667 NDUFAF8A1L188 74 aa8.15□□□□□ -1.11
PHF1-209ENST00000487667 SSPOA2VEC9 5147 aa8.12□□□□□ -1.11
PHF1-209ENST00000487667 KRTAP10-12P60413 245 aa8.07□□□□□ -1.12
PHF1-209ENST00000487667 KRTAP19-6Q3LI70 58 aa8.05□□□□□ -1.12
PHF1-209ENST00000487667 LCE3AQ5TA76 89 aa8.03□□□□□ -1.12
PHF1-209ENST00000487667 KRTAP10-7P60409 375 aaPredicted RBP8.01□□□□□ -1.13
PHF1-209ENST00000487667 KRTAP8-1Q8IUC2 63 aa7.95□□□□□ -1.14
PHF1-209ENST00000487667 LUZP6Q538Z0 58 aa7.88□□□□□ -1.15
PHF1-209ENST00000487667 SPRR5A0A1B0GTR4 108 aa7.83□□□□□ -1.16
PHF1-209ENST00000487667 FCGBPQ9Y6R7 5405 aaPredicted RBP7.8□□□□□ -1.16
PHF1-209ENST00000487667 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.77□□□□□ -1.17
PHF1-209ENST00000487667 KRTAP12-3P60328 96 aa7.76□□□□□ -1.17
PHF1-209ENST00000487667 KRTAP9-7A8MTY7 169 aa7.64□□□□□ -1.19
PHF1-209ENST00000487667 KRTAP4-8A0A0G2JLE6 195 aa7.61□□□□□ -1.19
PHF1-209ENST00000487667 KRTAP4-8Q9BYQ9 185 aa7.61□□□□□ -1.19
PHF1-209ENST00000487667 KRTAP19-5Q3LI72 72 aa7.6□□□□□ -1.19
PHF1-209ENST00000487667 KMT2DO14686 5537 aa7.56□□□□□ -1.2
PHF1-209ENST00000487667 MACF1Q9UPN3 7388 aaKnown RBP7.47□□□□□ -1.21
PHF1-209ENST00000487667 KRTAP19-7Q3SYF9 63 aa7.46□□□□□ -1.22
PHF1-209ENST00000487667 KRTAP19-4Q3LI73 84 aa7.45□□□□□ -1.22
PHF1-209ENST00000487667 A0A0A0MQY5 61 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms