RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 A8MUN3 132 aa6.44□□□□□ -1.38
COL4A6-207ENST00000487645 S4R3F8 94 aa6.42□□□□□ -1.38
COL4A6-207ENST00000487645 KRTAP9-8Q9BYQ0 159 aa6.4□□□□□ -1.38
COL4A6-207ENST00000487645 SEC61GP60059 68 aa6.39□□□□□ -1.39
COL4A6-207ENST00000487645 LCA10Q71F78 164 aa6.38□□□□□ -1.39
COL4A6-207ENST00000487645 C20orf197Q8N268 126 aa6.38□□□□□ -1.39
COL4A6-207ENST00000487645 SNURFQ9Y675 71 aa6.38□□□□□ -1.39
COL4A6-207ENST00000487645 V9GYY9 64 aa6.37□□□□□ -1.39
COL4A6-207ENST00000487645 CSAG1Q6PB30 78 aa6.35□□□□□ -1.39
COL4A6-207ENST00000487645 SERP1Q9Y6X1 66 aa6.35□□□□□ -1.39
COL4A6-207ENST00000487645 DMAC1Q96GE9 116 aa6.34□□□□□ -1.39
COL4A6-207ENST00000487645 SMIM26A0A096LP01 95 aa6.32□□□□□ -1.4
COL4A6-207ENST00000487645 MT2AP02795 61 aa6.32□□□□□ -1.4
COL4A6-207ENST00000487645 KRTAP9-2Q9BYQ4 174 aa6.32□□□□□ -1.4
COL4A6-207ENST00000487645 NDUFC1O43677 76 aa6.3□□□□□ -1.4
COL4A6-207ENST00000487645 SPANXA2-OT1Q8N9U9 137 aa6.3□□□□□ -1.4
COL4A6-207ENST00000487645 ATP5EP56381 51 aaPredicted RBP6.29□□□□□ -1.4
COL4A6-207ENST00000487645 ACYP2P14621 99 aa6.28□□□□□ -1.4
COL4A6-207ENST00000487645 KRTAP10-10P60014 251 aa6.28□□□□□ -1.4
COL4A6-207ENST00000487645 MT1FP04733 61 aa6.27□□□□□ -1.41
COL4A6-207ENST00000487645 KRTAP9-6A0A140TA67 174 aa6.25□□□□□ -1.41
COL4A6-207ENST00000487645 H7BZZ5 65 aa6.19□□□□□ -1.42
COL4A6-207ENST00000487645 KRTAP9-3Q9BYQ3 159 aa6.19□□□□□ -1.42
COL4A6-207ENST00000487645 CYSTM1Q9H1C7 97 aa6.19□□□□□ -1.42
COL4A6-207ENST00000487645 H0YAA0 97 aa6.17□□□□□ -1.42
COL4A6-207ENST00000487645 SPTSSBQ8NFR3 76 aa6.15□□□□□ -1.42
COL4A6-207ENST00000487645 CHKB-CPT1BH3BT56 60 aa6.13□□□□□ -1.43
COL4A6-207ENST00000487645 PMAIP1Q13794 54 aa6.13□□□□□ -1.43
COL4A6-207ENST00000487645 BRK1Q8WUW1 75 aa6.09□□□□□ -1.43
COL4A6-207ENST00000487645 ADM2Q7Z4H4 148 aa6.08□□□□□ -1.44
COL4A6-207ENST00000487645 LCE2BO14633 110 aa6.07□□□□□ -1.44
COL4A6-207ENST00000487645 CRIPTQ9P021 101 aa6.07□□□□□ -1.44
COL4A6-207ENST00000487645 COA5Q86WW8 74 aa6.06□□□□□ -1.44
COL4A6-207ENST00000487645 KRTAP19-1Q8IUB9 90 aa6.02□□□□□ -1.45
COL4A6-207ENST00000487645 SPRR2GQ9BYE4 73 aa6.02□□□□□ -1.45
COL4A6-207ENST00000487645 Q1T7F1 81 aa5.99□□□□□ -1.45
COL4A6-207ENST00000487645 P0C880 135 aa5.98□□□□□ -1.45
COL4A6-207ENST00000487645 CRCT1Q9UGL9 99 aa5.98□□□□□ -1.45
COL4A6-207ENST00000487645 USH2AO75445 5202 aa5.97□□□□□ -1.45
COL4A6-207ENST00000487645 FSIP2Q5CZC0 6907 aa5.96□□□□□ -1.46
COL4A6-207ENST00000487645 KRTAP19-8Q3LI54 63 aa5.92□□□□□ -1.46
COL4A6-207ENST00000487645 R4GN34 69 aa5.91□□□□□ -1.46
COL4A6-207ENST00000487645 Q5VV11 94 aa5.89□□□□□ -1.47
COL4A6-207ENST00000487645 KTN1-AS1Q86SY8 53 aa5.89□□□□□ -1.47
COL4A6-207ENST00000487645 H3BS24 57 aa5.87□□□□□ -1.47
COL4A6-207ENST00000487645 M0QZ58 72 aa5.85□□□□□ -1.47
COL4A6-207ENST00000487645 MT1BP07438 61 aa5.85□□□□□ -1.47
COL4A6-207ENST00000487645 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
COL4A6-207ENST00000487645 SSPOA2VEC9 5147 aa5.81□□□□□ -1.48
COL4A6-207ENST00000487645 A0A1B0GU69 56 aa5.76□□□□□ -1.49
COL4A6-207ENST00000487645 LINC01554Q52M75 96 aa5.74□□□□□ -1.49
COL4A6-207ENST00000487645 A0A1B0GU33 70 aa5.73□□□□□ -1.49
COL4A6-207ENST00000487645 PLAC4Q8WY50 150 aa5.73□□□□□ -1.49
COL4A6-207ENST00000487645 LINC01558Q9Y6Z2 57 aa5.72□□□□□ -1.49
COL4A6-207ENST00000487645 A6NN06 94 aa5.71□□□□□ -1.5
COL4A6-207ENST00000487645 FCGBPQ9Y6R7 5405 aaPredicted RBP5.71□□□□□ -1.5
COL4A6-207ENST00000487645 KRTAP13-4Q3LI77 160 aa5.7□□□□□ -1.5
COL4A6-207ENST00000487645 PRR15LQ9BU68 103 aa5.7□□□□□ -1.5
COL4A6-207ENST00000487645 KRTAP10-5P60370 271 aa5.67□□□□□ -1.5
COL4A6-207ENST00000487645 PSPHP1O15172 72 aa5.66□□□□□ -1.5
COL4A6-207ENST00000487645 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
COL4A6-207ENST00000487645 SPATA8Q6RVD6 105 aa5.63□□□□□ -1.51
COL4A6-207ENST00000487645 PRO2289Q9P1D8 64 aa5.6□□□□□ -1.51
COL4A6-207ENST00000487645 KRTAP9-7A8MTY7 169 aa5.57□□□□□ -1.52
COL4A6-207ENST00000487645 MT1XP80297 61 aa5.57□□□□□ -1.52
COL4A6-207ENST00000487645 A0A0D9SG42 100 aa5.56□□□□□ -1.52
COL4A6-207ENST00000487645 A6NED7 52 aa5.55□□□□□ -1.52
COL4A6-207ENST00000487645 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.54□□□□□ -1.52
COL4A6-207ENST00000487645 UQCR11O14957 56 aa5.53□□□□□ -1.52
COL4A6-207ENST00000487645 KRTAP12-1P59990 96 aa5.49□□□□□ -1.53
COL4A6-207ENST00000487645 A8MU10 97 aa5.48□□□□□ -1.53
COL4A6-207ENST00000487645 SPINT4Q6UDR6 99 aa5.48□□□□□ -1.53
COL4A6-207ENST00000487645 CAMK2N1Q7Z7J9 78 aa5.48□□□□□ -1.53
COL4A6-207ENST00000487645 KRTAP12-2P59991 146 aa5.43□□□□□ -1.54
COL4A6-207ENST00000487645 MACF1Q9UPN3 7388 aaKnown RBP5.41□□□□□ -1.54
COL4A6-207ENST00000487645 MIR22HGQ0VDD5 57 aa5.41□□□□□ -1.54
COL4A6-207ENST00000487645 KRTAP6-3Q3LI67 103 aa5.32□□□□□ -1.56
COL4A6-207ENST00000487645 KRTAP10-7P60409 375 aaPredicted RBP5.31□□□□□ -1.56
COL4A6-207ENST00000487645 KRTAP10-12P60413 245 aa5.31□□□□□ -1.56
COL4A6-207ENST00000487645 K7ERS5 55 aa5.27□□□□□ -1.57
COL4A6-207ENST00000487645 SYNE2Q8WXH0 6885 aaKnown RBP5.26□□□□□ -1.57
COL4A6-207ENST00000487645 PRAC1Q96KF2 57 aa5.25□□□□□ -1.57
COL4A6-207ENST00000487645 KMT2DO14686 5537 aa5.21□□□□□ -1.57
COL4A6-207ENST00000487645 KRTAP4-8A0A0G2JLE6 195 aa5.21□□□□□ -1.58
COL4A6-207ENST00000487645 KRTAP5-9P26371 169 aa5.21□□□□□ -1.58
COL4A6-207ENST00000487645 KRTAP8-1Q8IUC2 63 aa5.21□□□□□ -1.58
COL4A6-207ENST00000487645 KRTAP4-8Q9BYQ9 185 aa5.21□□□□□ -1.58
COL4A6-207ENST00000487645 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.58
COL4A6-207ENST00000487645 TNP1P09430 55 aa5.15□□□□□ -1.59
COL4A6-207ENST00000487645 ROMO1P60602 79 aa5.12□□□□□ -1.59
COL4A6-207ENST00000487645 SPRR2FQ96RM1 72 aa5.1□□□□□ -1.59
COL4A6-207ENST00000487645 KRTAP25-1Q3LHN0 102 aa5.06□□□□□ -1.6
COL4A6-207ENST00000487645 MUC12Q9UKN1 5478 aa5.03□□□□□ -1.6
COL4A6-207ENST00000487645 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
COL4A6-207ENST00000487645 MDN1Q9NU22 5596 aa4.98□□□□□ -1.61
COL4A6-207ENST00000487645 LCE3AQ5TA76 89 aa4.98□□□□□ -1.61
COL4A6-207ENST00000487645 A0A0A0MQY5 61 aa4.97□□□□□ -1.61
COL4A6-207ENST00000487645 KRTAP19-7Q3SYF9 63 aa4.97□□□□□ -1.61
COL4A6-207ENST00000487645 SPRR2EP22531 72 aa4.95□□□□□ -1.62
COL4A6-207ENST00000487645 SPRR2BP35325 72 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms