RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 SERP2Q8N6R1 65 aa9.14□□□□□ -0.95
SEC22A-208ENST00000487572 SNURFQ9Y675 71 aa9.12□□□□□ -0.95
SEC22A-208ENST00000487572 KRTAP9-6A0A140TA67 174 aa9.11□□□□□ -0.95
SEC22A-208ENST00000487572 NDUFC1O43677 76 aa9.11□□□□□ -0.95
SEC22A-208ENST00000487572 FSIP2Q5CZC0 6907 aa9.09□□□□□ -0.95
SEC22A-208ENST00000487572 DMAC1Q96GE9 116 aa9.09□□□□□ -0.95
SEC22A-208ENST00000487572 CRCT1Q9UGL9 99 aa9.09□□□□□ -0.95
SEC22A-208ENST00000487572 LCE2BO14633 110 aa9.06□□□□□ -0.96
SEC22A-208ENST00000487572 C20orf197Q8N268 126 aa9.06□□□□□ -0.96
SEC22A-208ENST00000487572 ANAPC13Q9BS18 74 aa9.05□□□□□ -0.96
SEC22A-208ENST00000487572 COX7CP15954 63 aa9.02□□□□□ -0.97
SEC22A-208ENST00000487572 USH2AO75445 5202 aa8.95□□□□□ -0.98
SEC22A-208ENST00000487572 ACYP2P14621 99 aa8.94□□□□□ -0.98
SEC22A-208ENST00000487572 H0YAA0 97 aa8.88□□□□□ -0.99
SEC22A-208ENST00000487572 SPANXA2-OT1Q8N9U9 137 aa8.87□□□□□ -0.99
SEC22A-208ENST00000487572 ADM2Q7Z4H4 148 aa8.86□□□□□ -0.99
SEC22A-208ENST00000487572 KRTAP19-1Q8IUB9 90 aa8.86□□□□□ -0.99
SEC22A-208ENST00000487572 CHKB-CPT1BH3BT56 60 aa8.82□□□□□ -1
SEC22A-208ENST00000487572 CCDC179H3BU77 68 aa8.82□□□□□ -1
SEC22A-208ENST00000487572 SPRR2GQ9BYE4 73 aa8.79□□□□□ -1
SEC22A-208ENST00000487572 SSPOA2VEC9 5147 aa8.79□□□□□ -1
SEC22A-208ENST00000487572 CRIPTQ9P021 101 aa8.78□□□□□ -1
SEC22A-208ENST00000487572 SPTSSBQ8NFR3 76 aa8.77□□□□□ -1.01
SEC22A-208ENST00000487572 CYSTM1Q9H1C7 97 aa8.77□□□□□ -1.01
SEC22A-208ENST00000487572 H7BZZ5 65 aa8.74□□□□□ -1.01
SEC22A-208ENST00000487572 P0C880 135 aa8.7□□□□□ -1.02
SEC22A-208ENST00000487572 Q5VV11 94 aa8.69□□□□□ -1.02
SEC22A-208ENST00000487572 KRTAP19-8Q3LI54 63 aa8.68□□□□□ -1.02
SEC22A-208ENST00000487572 KRTAP19-6Q3LI70 58 aa8.66□□□□□ -1.02
SEC22A-208ENST00000487572 KRTAP3-2Q9BYR7 98 aa8.66□□□□□ -1.02
SEC22A-208ENST00000487572 MT1BP07438 61 aa8.65□□□□□ -1.02
SEC22A-208ENST00000487572 COA5Q86WW8 74 aa8.65□□□□□ -1.02
SEC22A-208ENST00000487572 R4GN34 69 aa8.6□□□□□ -1.03
SEC22A-208ENST00000487572 PCP4P48539 62 aa8.58□□□□□ -1.04
SEC22A-208ENST00000487572 M0QZ58 72 aa8.57□□□□□ -1.04
SEC22A-208ENST00000487572 ATP5EP56381 51 aaPredicted RBP8.55□□□□□ -1.04
SEC22A-208ENST00000487572 FCGBPQ9Y6R7 5405 aaPredicted RBP8.55□□□□□ -1.04
SEC22A-208ENST00000487572 TMEM258P61165 79 aa8.54□□□□□ -1.04
SEC22A-208ENST00000487572 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.45□□□□□ -1.06
SEC22A-208ENST00000487572 LINC01554Q52M75 96 aa8.45□□□□□ -1.06
SEC22A-208ENST00000487572 A6NN06 94 aa8.44□□□□□ -1.06
SEC22A-208ENST00000487572 PLAC4Q8WY50 150 aa8.39□□□□□ -1.07
SEC22A-208ENST00000487572 SEC61GP60059 68 aa8.37□□□□□ -1.07
SEC22A-208ENST00000487572 KRTAP10-5P60370 271 aa8.37□□□□□ -1.07
SEC22A-208ENST00000487572 SERP1Q9Y6X1 66 aa8.34□□□□□ -1.07
SEC22A-208ENST00000487572 KRTAP13-4Q3LI77 160 aa8.27□□□□□ -1.09
SEC22A-208ENST00000487572 KRTAP9-7A8MTY7 169 aa8.23□□□□□ -1.09
SEC22A-208ENST00000487572 MACF1Q9UPN3 7388 aaKnown RBP8.23□□□□□ -1.09
SEC22A-208ENST00000487572 MT1XP80297 61 aa8.21□□□□□ -1.1
SEC22A-208ENST00000487572 PRO2289Q9P1D8 64 aa8.21□□□□□ -1.1
SEC22A-208ENST00000487572 A0A1B0GU69 56 aa8.2□□□□□ -1.1
SEC22A-208ENST00000487572 A0A1B0GU33 70 aa8.18□□□□□ -1.1
SEC22A-208ENST00000487572 SPATA8Q6RVD6 105 aa8.14□□□□□ -1.11
SEC22A-208ENST00000487572 A0A0D9SG42 100 aa8.11□□□□□ -1.11
SEC22A-208ENST00000487572 SYNE2Q8WXH0 6885 aaKnown RBP8.1□□□□□ -1.11
SEC22A-208ENST00000487572 PRR15LQ9BU68 103 aa8.06□□□□□ -1.12
SEC22A-208ENST00000487572 RPS28P62857 69 aaKnown RBP8.04□□□□□ -1.12
SEC22A-208ENST00000487572 LINC01558Q9Y6Z2 57 aa8.04□□□□□ -1.12
SEC22A-208ENST00000487572 SMIM26A0A096LP01 95 aa7.99□□□□□ -1.13
SEC22A-208ENST00000487572 KRTAP6-3Q3LI67 103 aa7.99□□□□□ -1.13
SEC22A-208ENST00000487572 CAMK2N1Q7Z7J9 78 aa7.98□□□□□ -1.13
SEC22A-208ENST00000487572 SPINT4Q6UDR6 99 aa7.96□□□□□ -1.14
SEC22A-208ENST00000487572 V9GYY9 64 aa7.96□□□□□ -1.14
SEC22A-208ENST00000487572 Q1T7F1 81 aa7.92□□□□□ -1.14
SEC22A-208ENST00000487572 A8MU10 97 aa7.91□□□□□ -1.14
SEC22A-208ENST00000487572 KRTAP12-2P59991 146 aa7.9□□□□□ -1.14
SEC22A-208ENST00000487572 KRTAP12-1P59990 96 aa7.89□□□□□ -1.15
SEC22A-208ENST00000487572 KRTAP10-7P60409 375 aaPredicted RBP7.86□□□□□ -1.15
SEC22A-208ENST00000487572 PSPHP1O15172 72 aa7.82□□□□□ -1.16
SEC22A-208ENST00000487572 UQCR11O14957 56 aa7.78□□□□□ -1.16
SEC22A-208ENST00000487572 KRTAP10-12P60413 245 aa7.78□□□□□ -1.16
SEC22A-208ENST00000487572 KRTAP4-8A0A0G2JLE6 195 aa7.76□□□□□ -1.17
SEC22A-208ENST00000487572 KRTAP5-9P26371 169 aa7.76□□□□□ -1.17
SEC22A-208ENST00000487572 KRTAP8-1Q8IUC2 63 aa7.76□□□□□ -1.17
SEC22A-208ENST00000487572 KRTAP4-8Q9BYQ9 185 aa7.76□□□□□ -1.17
SEC22A-208ENST00000487572 KMT2DO14686 5537 aa7.75□□□□□ -1.17
SEC22A-208ENST00000487572 SPRR2FQ96RM1 72 aa7.68□□□□□ -1.18
SEC22A-208ENST00000487572 MIR22HGQ0VDD5 57 aa7.66□□□□□ -1.18
SEC22A-208ENST00000487572 A6NED7 52 aa7.6□□□□□ -1.19
SEC22A-208ENST00000487572 NEBP20929 6669 aa7.59□□□□□ -1.2
SEC22A-208ENST00000487572 MUC12Q9UKN1 5478 aa7.58□□□□□ -1.2
SEC22A-208ENST00000487572 C10orf95Q9H7T3 257 aa7.53□□□□□ -1.2
SEC22A-208ENST00000487572 SPRR2EP22531 72 aa7.49□□□□□ -1.21
SEC22A-208ENST00000487572 SPRR2BP35325 72 aa7.49□□□□□ -1.21
SEC22A-208ENST00000487572 SPRR2AP35326 72 aa7.49□□□□□ -1.21
SEC22A-208ENST00000487572 K7ERS5 55 aa7.45□□□□□ -1.22
SEC22A-208ENST00000487572 MDN1Q9NU22 5596 aa7.44□□□□□ -1.22
SEC22A-208ENST00000487572 TNP1P09430 55 aa7.43□□□□□ -1.22
SEC22A-208ENST00000487572 LCE1AQ5T7P2 110 aa7.4□□□□□ -1.22
SEC22A-208ENST00000487572 CDC42SE1Q9NRR8 79 aa7.38□□□□□ -1.23
SEC22A-208ENST00000487572 KRTAP19-7Q3SYF9 63 aa7.32□□□□□ -1.24
SEC22A-208ENST00000487572 LCE3AQ5TA76 89 aa7.29□□□□□ -1.24
SEC22A-208ENST00000487572 KRTAP20-1Q3LI63 56 aa7.27□□□□□ -1.25
SEC22A-208ENST00000487572 KRTAP19-5Q3LI72 72 aa7.27□□□□□ -1.25
SEC22A-208ENST00000487572 MT1EP04732 61 aa7.25□□□□□ -1.25
SEC22A-208ENST00000487572 SPRR2DP22532 72 aa7.23□□□□□ -1.25
SEC22A-208ENST00000487572 BRK1Q8WUW1 75 aa7.21□□□□□ -1.26
SEC22A-208ENST00000487572 KRTAP25-1Q3LHN0 102 aa7.17□□□□□ -1.26
SEC22A-208ENST00000487572 KRTAP2-3P0C7H8 128 aa7.15□□□□□ -1.26
SEC22A-208ENST00000487572 KRTAP2-4Q9BYR9 128 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 477.5 ms