RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 CDC42SE1Q9NRR8 79 aa8.92□□□□□ -0.98
NF1-211ENST00000487476 MUC2Q02817 5179 aa8.9□□□□□ -0.98
NF1-211ENST00000487476 SPINK7P58062 85 aa8.87□□□□□ -0.99
NF1-211ENST00000487476 KRTAP4-1Q9BYQ7 146 aa8.87□□□□□ -0.99
NF1-211ENST00000487476 ACYP2P14621 99 aa8.85□□□□□ -0.99
NF1-211ENST00000487476 DMAC1Q96GE9 116 aa8.84□□□□□ -0.99
NF1-211ENST00000487476 RNF213Q63HN8 5207 aa8.84□□□□□ -0.99
NF1-211ENST00000487476 SEC61GP60059 68 aa8.84□□□□□ -0.99
NF1-211ENST00000487476 A6NN06 94 aa8.82□□□□□ -1
NF1-211ENST00000487476 IGKV2-30P06310 120 aa8.8□□□□□ -1
NF1-211ENST00000487476 KTN1-AS1Q86SY8 53 aa8.8□□□□□ -1
NF1-211ENST00000487476 IGKV2D-30A0A075B6S6 120 aa8.74□□□□□ -1.01
NF1-211ENST00000487476 A0A1B0GU69 56 aa8.66□□□□□ -1.02
NF1-211ENST00000487476 C7orf65Q6ZTY9 151 aa8.66□□□□□ -1.02
NF1-211ENST00000487476 RBM12B-AS1Q9P1G2 102 aa8.61□□□□□ -1.03
NF1-211ENST00000487476 KRTAP19-2Q3LHN2 52 aa8.56□□□□□ -1.04
NF1-211ENST00000487476 SPATA8Q6RVD6 105 aa8.55□□□□□ -1.04
NF1-211ENST00000487476 UQCR11O14957 56 aa8.51□□□□□ -1.05
NF1-211ENST00000487476 MIR22HGQ0VDD5 57 aa8.51□□□□□ -1.05
NF1-211ENST00000487476 FAT4Q6V0I7 4981 aa8.51□□□□□ -1.05
NF1-211ENST00000487476 LCE2CQ5TA81 110 aa8.49□□□□□ -1.05
NF1-211ENST00000487476 COX6B2Q6YFQ2 88 aa8.46□□□□□ -1.06
NF1-211ENST00000487476 KRTAP3-1Q9BYR8 98 aa8.45□□□□□ -1.06
NF1-211ENST00000487476 PRAC1Q96KF2 57 aa8.42□□□□□ -1.06
NF1-211ENST00000487476 ADM2Q7Z4H4 148 aa8.41□□□□□ -1.06
NF1-211ENST00000487476 FLGP20930 4061 aaPredicted RBP8.4□□□□□ -1.06
NF1-211ENST00000487476 H1FX-AS1Q4G0G2 97 aa8.33□□□□□ -1.08
NF1-211ENST00000487476 MT1HP80294 61 aa8.32□□□□□ -1.08
NF1-211ENST00000487476 H0YAA0 97 aa8.24□□□□□ -1.09
NF1-211ENST00000487476 LCE2AQ5TA79 106 aaPredicted RBP8.23□□□□□ -1.09
NF1-211ENST00000487476 M0R2T5 61 aa8.2□□□□□ -1.1
NF1-211ENST00000487476 S4R3F8 94 aa8.2□□□□□ -1.1
NF1-211ENST00000487476 A0A1B0GU33 70 aa8.16□□□□□ -1.1
NF1-211ENST00000487476 KRTAP3-3Q9BYR6 98 aa8.16□□□□□ -1.1
NF1-211ENST00000487476 LINC01554Q52M75 96 aa8.15□□□□□ -1.1
NF1-211ENST00000487476 CSAG1Q6PB30 78 aa8.15□□□□□ -1.1
NF1-211ENST00000487476 KRTAP10-6P60371 365 aaPredicted RBP8.06□□□□□ -1.12
NF1-211ENST00000487476 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
NF1-211ENST00000487476 KRTAP9-8Q9BYQ0 159 aa7.98□□□□□ -1.13
NF1-211ENST00000487476 KRTAP25-1Q3LHN0 102 aa7.92□□□□□ -1.14
NF1-211ENST00000487476 MT2AP02795 61 aa7.91□□□□□ -1.14
NF1-211ENST00000487476 K7ERS5 55 aa7.91□□□□□ -1.14
NF1-211ENST00000487476 MT1FP04733 61 aa7.87□□□□□ -1.15
NF1-211ENST00000487476 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
NF1-211ENST00000487476 KRTAP10-10P60014 251 aa7.83□□□□□ -1.16
NF1-211ENST00000487476 KRTAP3-2Q9BYR7 98 aa7.83□□□□□ -1.16
NF1-211ENST00000487476 CRIPTQ9P021 101 aa7.8□□□□□ -1.16
NF1-211ENST00000487476 A0A0D9SG42 100 aa7.78□□□□□ -1.16
NF1-211ENST00000487476 ROMO1P60602 79 aa7.77□□□□□ -1.17
NF1-211ENST00000487476 P0C880 135 aa7.76□□□□□ -1.17
NF1-211ENST00000487476 KRTAP9-3Q9BYQ3 159 aa7.7□□□□□ -1.18
NF1-211ENST00000487476 KRTAP19-1Q8IUB9 90 aa7.61□□□□□ -1.19
NF1-211ENST00000487476 KRTAP12-2P59991 146 aa7.6□□□□□ -1.19
NF1-211ENST00000487476 LCE2DQ5TA82 110 aaPredicted RBP7.57□□□□□ -1.2
NF1-211ENST00000487476 LCE2BO14633 110 aa7.56□□□□□ -1.2
NF1-211ENST00000487476 SPRR2GQ9BYE4 73 aa7.55□□□□□ -1.2
NF1-211ENST00000487476 R4GN34 69 aa7.54□□□□□ -1.2
NF1-211ENST00000487476 KRTAP12-1P59990 96 aa7.53□□□□□ -1.2
NF1-211ENST00000487476 M0QZ58 72 aa7.53□□□□□ -1.2
NF1-211ENST00000487476 H3BS24 57 aa7.52□□□□□ -1.21
NF1-211ENST00000487476 C10orf95Q9H7T3 257 aa7.52□□□□□ -1.21
NF1-211ENST00000487476 KRTAP9-2Q9BYQ4 174 aa7.5□□□□□ -1.21
NF1-211ENST00000487476 SPINT4Q6UDR6 99 aa7.5□□□□□ -1.21
NF1-211ENST00000487476 USH2AO75445 5202 aa7.47□□□□□ -1.21
NF1-211ENST00000487476 FSIP2Q5CZC0 6907 aa7.4□□□□□ -1.22
NF1-211ENST00000487476 KRTAP19-8Q3LI54 63 aa7.4□□□□□ -1.23
NF1-211ENST00000487476 MT1BP07438 61 aa7.37□□□□□ -1.23
NF1-211ENST00000487476 SSPOA2VEC9 5147 aa7.28□□□□□ -1.24
NF1-211ENST00000487476 KRTAP15-1Q3LI76 137 aa7.25□□□□□ -1.25
NF1-211ENST00000487476 PLAC4Q8WY50 150 aa7.21□□□□□ -1.26
NF1-211ENST00000487476 CRCT1Q9UGL9 99 aa7.17□□□□□ -1.26
NF1-211ENST00000487476 KRTAP19-6Q3LI70 58 aa7.13□□□□□ -1.27
NF1-211ENST00000487476 NDUFAF8A1L188 74 aa7.09□□□□□ -1.27
NF1-211ENST00000487476 MT1XP80297 61 aa7.06□□□□□ -1.28
NF1-211ENST00000487476 FCGBPQ9Y6R7 5405 aaPredicted RBP7.05□□□□□ -1.28
NF1-211ENST00000487476 KRTAP10-5P60370 271 aa7.04□□□□□ -1.28
NF1-211ENST00000487476 KRTAP9-6A0A140TA67 174 aa7.03□□□□□ -1.28
NF1-211ENST00000487476 CAMK2N1Q7Z7J9 78 aa7.02□□□□□ -1.29
NF1-211ENST00000487476 PRO2289Q9P1D8 64 aa6.94□□□□□ -1.3
NF1-211ENST00000487476 PP632Q6XCG6 107 aa6.83□□□□□ -1.32
NF1-211ENST00000487476 KRTAP10-7P60409 375 aaPredicted RBP6.78□□□□□ -1.32
NF1-211ENST00000487476 KMT2DO14686 5537 aa6.72□□□□□ -1.33
NF1-211ENST00000487476 MACF1Q9UPN3 7388 aaKnown RBP6.69□□□□□ -1.34
NF1-211ENST00000487476 KRTAP10-12P60413 245 aa6.67□□□□□ -1.34
NF1-211ENST00000487476 TNP1P09430 55 aa6.66□□□□□ -1.34
NF1-211ENST00000487476 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.65□□□□□ -1.34
NF1-211ENST00000487476 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
NF1-211ENST00000487476 KRTAP4-8Q9BYQ9 185 aa6.62□□□□□ -1.35
NF1-211ENST00000487476 KRTAP23-1A1A580 65 aa6.58□□□□□ -1.36
NF1-211ENST00000487476 LUZP6Q538Z0 58 aa6.57□□□□□ -1.36
NF1-211ENST00000487476 SYNE2Q8WXH0 6885 aaKnown RBP6.54□□□□□ -1.36
NF1-211ENST00000487476 KRTAP8-1Q8IUC2 63 aa6.47□□□□□ -1.37
NF1-211ENST00000487476 LCE3AQ5TA76 89 aa6.45□□□□□ -1.38
NF1-211ENST00000487476 SPRR5A0A1B0GTR4 108 aa6.43□□□□□ -1.38
NF1-211ENST00000487476 KRTAP9-7A8MTY7 169 aa6.39□□□□□ -1.39
NF1-211ENST00000487476 KRTAP6-3Q3LI67 103 aa6.37□□□□□ -1.39
NF1-211ENST00000487476 KRTAP5-9P26371 169 aa6.33□□□□□ -1.4
NF1-211ENST00000487476 SPRR2FQ96RM1 72 aa6.33□□□□□ -1.4
NF1-211ENST00000487476 KRTAP19-5Q3LI72 72 aa6.3□□□□□ -1.4
NF1-211ENST00000487476 KRTAP19-7Q3SYF9 63 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms