RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 KRTAP3-3Q9BYR6 98 aa9.2□□□□□ -0.94
PCOLCE-208ENST00000487172 KRTAP9-2Q9BYQ4 174 aa9.16□□□□□ -0.94
PCOLCE-208ENST00000487172 MT1FP04733 61 aa9.15□□□□□ -0.94
PCOLCE-208ENST00000487172 NDUFC1O43677 76 aa9.11□□□□□ -0.95
PCOLCE-208ENST00000487172 KRTAP10-10P60014 251 aa9.11□□□□□ -0.95
PCOLCE-208ENST00000487172 SPANXA2-OT1Q8N9U9 137 aa9.1□□□□□ -0.95
PCOLCE-208ENST00000487172 ANAPC13Q9BS18 74 aa9.08□□□□□ -0.96
PCOLCE-208ENST00000487172 ACYP2P14621 99 aa9.07□□□□□ -0.96
PCOLCE-208ENST00000487172 KRTAP9-3Q9BYQ3 159 aa9.03□□□□□ -0.96
PCOLCE-208ENST00000487172 H0YAA0 97 aa8.96□□□□□ -0.98
PCOLCE-208ENST00000487172 H7BZZ5 65 aa8.95□□□□□ -0.98
PCOLCE-208ENST00000487172 CYSTM1Q9H1C7 97 aa8.94□□□□□ -0.98
PCOLCE-208ENST00000487172 CCDC179H3BU77 68 aa8.89□□□□□ -0.99
PCOLCE-208ENST00000487172 CHKB-CPT1BH3BT56 60 aa8.86□□□□□ -0.99
PCOLCE-208ENST00000487172 LCE2BO14633 110 aa8.86□□□□□ -0.99
PCOLCE-208ENST00000487172 SPTSSBQ8NFR3 76 aa8.86□□□□□ -0.99
PCOLCE-208ENST00000487172 ADM2Q7Z4H4 148 aa8.81□□□□□ -1
PCOLCE-208ENST00000487172 CRIPTQ9P021 101 aa8.8□□□□□ -1
PCOLCE-208ENST00000487172 COA5Q86WW8 74 aa8.77□□□□□ -1.01
PCOLCE-208ENST00000487172 KRTAP19-1Q8IUB9 90 aa8.77□□□□□ -1.01
PCOLCE-208ENST00000487172 SPRR2GQ9BYE4 73 aa8.75□□□□□ -1.01
PCOLCE-208ENST00000487172 CRCT1Q9UGL9 99 aa8.75□□□□□ -1.01
PCOLCE-208ENST00000487172 KRTAP3-2Q9BYR7 98 aa8.72□□□□□ -1.01
PCOLCE-208ENST00000487172 KRTAP9-6A0A140TA67 174 aa8.7□□□□□ -1.02
PCOLCE-208ENST00000487172 ATP5EP56381 51 aaPredicted RBP8.68□□□□□ -1.02
PCOLCE-208ENST00000487172 P0C880 135 aa8.67□□□□□ -1.02
PCOLCE-208ENST00000487172 USH2AO75445 5202 aa8.64□□□□□ -1.03
PCOLCE-208ENST00000487172 KRTAP19-8Q3LI54 63 aa8.63□□□□□ -1.03
PCOLCE-208ENST00000487172 TMEM258P61165 79 aa8.62□□□□□ -1.03
PCOLCE-208ENST00000487172 Q5VV11 94 aa8.56□□□□□ -1.04
PCOLCE-208ENST00000487172 R4GN34 69 aa8.56□□□□□ -1.04
PCOLCE-208ENST00000487172 FSIP2Q5CZC0 6907 aa8.56□□□□□ -1.04
PCOLCE-208ENST00000487172 MT1BP07438 61 aa8.54□□□□□ -1.04
PCOLCE-208ENST00000487172 KRTAP19-6Q3LI70 58 aa8.51□□□□□ -1.05
PCOLCE-208ENST00000487172 M0QZ58 72 aa8.49□□□□□ -1.05
PCOLCE-208ENST00000487172 SSPOA2VEC9 5147 aa8.46□□□□□ -1.05
PCOLCE-208ENST00000487172 SEC61GP60059 68 aa8.46□□□□□ -1.06
PCOLCE-208ENST00000487172 SERP1Q9Y6X1 66 aa8.43□□□□□ -1.06
PCOLCE-208ENST00000487172 PCP4P48539 62 aa8.39□□□□□ -1.07
PCOLCE-208ENST00000487172 A0A1B0GU69 56 aa8.32□□□□□ -1.08
PCOLCE-208ENST00000487172 LINC01554Q52M75 96 aa8.32□□□□□ -1.08
PCOLCE-208ENST00000487172 PLAC4Q8WY50 150 aa8.3□□□□□ -1.08
PCOLCE-208ENST00000487172 KRTAP13-4Q3LI77 160 aa8.29□□□□□ -1.08
PCOLCE-208ENST00000487172 A0A1B0GU33 70 aa8.27□□□□□ -1.09
PCOLCE-208ENST00000487172 KRTAP10-5P60370 271 aa8.26□□□□□ -1.09
PCOLCE-208ENST00000487172 LINC01558Q9Y6Z2 57 aa8.26□□□□□ -1.09
PCOLCE-208ENST00000487172 A6NN06 94 aa8.25□□□□□ -1.09
PCOLCE-208ENST00000487172 PRR15LQ9BU68 103 aa8.21□□□□□ -1.1
PCOLCE-208ENST00000487172 FCGBPQ9Y6R7 5405 aaPredicted RBP8.2□□□□□ -1.1
PCOLCE-208ENST00000487172 SPATA8Q6RVD6 105 aa8.15□□□□□ -1.1
PCOLCE-208ENST00000487172 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.12□□□□□ -1.11
PCOLCE-208ENST00000487172 PRO2289Q9P1D8 64 aa8.12□□□□□ -1.11
PCOLCE-208ENST00000487172 MT1XP80297 61 aa8.11□□□□□ -1.11
PCOLCE-208ENST00000487172 V9GYY9 64 aa8.08□□□□□ -1.12
PCOLCE-208ENST00000487172 RPS28P62857 69 aaKnown RBP8.07□□□□□ -1.12
PCOLCE-208ENST00000487172 SMIM26A0A096LP01 95 aa8.05□□□□□ -1.12
PCOLCE-208ENST00000487172 A0A0D9SG42 100 aa8.05□□□□□ -1.12
PCOLCE-208ENST00000487172 Q1T7F1 81 aa8.04□□□□□ -1.12
PCOLCE-208ENST00000487172 UQCR11O14957 56 aa7.96□□□□□ -1.14
PCOLCE-208ENST00000487172 KRTAP12-1P59990 96 aa7.95□□□□□ -1.14
PCOLCE-208ENST00000487172 A8MU10 97 aa7.93□□□□□ -1.14
PCOLCE-208ENST00000487172 SPINT4Q6UDR6 99 aa7.93□□□□□ -1.14
PCOLCE-208ENST00000487172 SVIPQ8NHG7 77 aa7.93□□□□□ -1.14
PCOLCE-208ENST00000487172 CAMK2N1Q7Z7J9 78 aa7.92□□□□□ -1.14
PCOLCE-208ENST00000487172 PSPHP1O15172 72 aa7.89□□□□□ -1.15
PCOLCE-208ENST00000487172 KRTAP9-7A8MTY7 169 aa7.88□□□□□ -1.15
PCOLCE-208ENST00000487172 KRTAP12-2P59991 146 aa7.88□□□□□ -1.15
PCOLCE-208ENST00000487172 MACF1Q9UPN3 7388 aaKnown RBP7.82□□□□□ -1.16
PCOLCE-208ENST00000487172 MIR22HGQ0VDD5 57 aa7.81□□□□□ -1.16
PCOLCE-208ENST00000487172 KRTAP6-3Q3LI67 103 aa7.78□□□□□ -1.16
PCOLCE-208ENST00000487172 KRTAP10-7P60409 375 aaPredicted RBP7.74□□□□□ -1.17
PCOLCE-208ENST00000487172 KRTAP10-12P60413 245 aa7.74□□□□□ -1.17
PCOLCE-208ENST00000487172 A6NED7 52 aa7.66□□□□□ -1.18
PCOLCE-208ENST00000487172 KRTAP5-9P26371 169 aa7.62□□□□□ -1.19
PCOLCE-208ENST00000487172 SYNE2Q8WXH0 6885 aaKnown RBP7.61□□□□□ -1.19
PCOLCE-208ENST00000487172 KRTAP4-8A0A0G2JLE6 195 aa7.6□□□□□ -1.19
PCOLCE-208ENST00000487172 KRTAP4-8Q9BYQ9 185 aa7.6□□□□□ -1.19
PCOLCE-208ENST00000487172 K7ERS5 55 aa7.58□□□□□ -1.2
PCOLCE-208ENST00000487172 KRTAP8-1Q8IUC2 63 aa7.58□□□□□ -1.2
PCOLCE-208ENST00000487172 C10orf95Q9H7T3 257 aa7.56□□□□□ -1.2
PCOLCE-208ENST00000487172 KMT2DO14686 5537 aa7.51□□□□□ -1.21
PCOLCE-208ENST00000487172 TNP1P09430 55 aa7.46□□□□□ -1.22
PCOLCE-208ENST00000487172 SPRR2FQ96RM1 72 aa7.45□□□□□ -1.22
PCOLCE-208ENST00000487172 CDC42SE1Q9NRR8 79 aa7.45□□□□□ -1.22
PCOLCE-208ENST00000487172 H3BS24 57 aa7.31□□□□□ -1.24
PCOLCE-208ENST00000487172 KRTAP25-1Q3LHN0 102 aa7.28□□□□□ -1.24
PCOLCE-208ENST00000487172 KRTAP19-7Q3SYF9 63 aa7.26□□□□□ -1.25
PCOLCE-208ENST00000487172 MUC12Q9UKN1 5478 aa7.26□□□□□ -1.25
PCOLCE-208ENST00000487172 LCE3AQ5TA76 89 aa7.24□□□□□ -1.25
PCOLCE-208ENST00000487172 SPRR2EP22531 72 aa7.23□□□□□ -1.25
PCOLCE-208ENST00000487172 SPRR2BP35325 72 aa7.23□□□□□ -1.25
PCOLCE-208ENST00000487172 SPRR2AP35326 72 aa7.23□□□□□ -1.25
PCOLCE-208ENST00000487172 LCE1AQ5T7P2 110 aa7.23□□□□□ -1.25
PCOLCE-208ENST00000487172 MT1EP04732 61 aa7.17□□□□□ -1.26
PCOLCE-208ENST00000487172 KRTAP19-5Q3LI72 72 aa7.17□□□□□ -1.26
PCOLCE-208ENST00000487172 ROMO1P60602 79 aa7.15□□□□□ -1.26
PCOLCE-208ENST00000487172 NEBP20929 6669 aa7.11□□□□□ -1.27
PCOLCE-208ENST00000487172 BRK1Q8WUW1 75 aa7.09□□□□□ -1.27
PCOLCE-208ENST00000487172 KRTAP23-1A1A580 65 aa7.08□□□□□ -1.28
PCOLCE-208ENST00000487172 MDN1Q9NU22 5596 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms