RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 CDC42SE1Q9NRR8 79 aa10.55□□□□□ -0.72
HPS3-206ENST00000486530 LCA10Q71F78 164 aa10.54□□□□□ -0.72
HPS3-206ENST00000486530 A8MU10 97 aa10.53□□□□□ -0.72
HPS3-206ENST00000486530 SEC61GP60059 68 aa10.46□□□□□ -0.74
HPS3-206ENST00000486530 LPAP08519 4548 aa10.43□□□□□ -0.74
HPS3-206ENST00000486530 UQCR11O14957 56 aa10.4□□□□□ -0.75
HPS3-206ENST00000486530 LRP2P98164 4655 aa10.38□□□□□ -0.75
HPS3-206ENST00000486530 SPATA8Q6RVD6 105 aa10.34□□□□□ -0.75
HPS3-206ENST00000486530 HERC1Q15751 4861 aa10.31□□□□□ -0.76
HPS3-206ENST00000486530 MIR22HGQ0VDD5 57 aa10.31□□□□□ -0.76
HPS3-206ENST00000486530 S4R3F8 94 aa10.3□□□□□ -0.76
HPS3-206ENST00000486530 PMAIP1Q13794 54 aa10.27□□□□□ -0.76
HPS3-206ENST00000486530 KRTAP3-3Q9BYR6 98 aa10.27□□□□□ -0.76
HPS3-206ENST00000486530 H1FX-AS1Q4G0G2 97 aa10.26□□□□□ -0.77
HPS3-206ENST00000486530 RBM12B-AS1Q9P1G2 102 aa10.25□□□□□ -0.77
HPS3-206ENST00000486530 SEC61BP60468 96 aaKnown RBP10.24□□□□□ -0.77
HPS3-206ENST00000486530 A0A1B0GU33 70 aa10.18□□□□□ -0.78
HPS3-206ENST00000486530 A6NN06 94 aa10.17□□□□□ -0.78
HPS3-206ENST00000486530 HMCN2Q8NDA2 5059 aa10.12□□□□□ -0.79
HPS3-206ENST00000486530 H0YAA0 97 aa10.1□□□□□ -0.79
HPS3-206ENST00000486530 MUC17Q685J3 4493 aa10.07□□□□□ -0.8
HPS3-206ENST00000486530 KRTAP4-1Q9BYQ7 146 aa10.05□□□□□ -0.8
HPS3-206ENST00000486530 KRTAP10-6P60371 365 aaPredicted RBP10.04□□□□□ -0.8
HPS3-206ENST00000486530 KRTAP3-2Q9BYR7 98 aa10.02□□□□□ -0.81
HPS3-206ENST00000486530 CSAG1Q6PB30 78 aa10□□□□□ -0.81
HPS3-206ENST00000486530 KTN1-AS1Q86SY8 53 aa10□□□□□ -0.81
HPS3-206ENST00000486530 P0C880 135 aa9.89□□□□□ -0.83
HPS3-206ENST00000486530 ADM2Q7Z4H4 148 aa9.89□□□□□ -0.83
HPS3-206ENST00000486530 KRTAP13-4Q3LI77 160 aa9.83□□□□□ -0.84
HPS3-206ENST00000486530 KRTAP19-2Q3LHN2 52 aa9.81□□□□□ -0.84
HPS3-206ENST00000486530 K7ERS5 55 aa9.77□□□□□ -0.85
HPS3-206ENST00000486530 MUC2Q02817 5179 aa9.73□□□□□ -0.85
HPS3-206ENST00000486530 UBR4Q5T4S7 5183 aa9.72□□□□□ -0.85
HPS3-206ENST00000486530 A0A0D9SG42 100 aa9.7□□□□□ -0.86
HPS3-206ENST00000486530 M0QZ58 72 aa9.68□□□□□ -0.86
HPS3-206ENST00000486530 RNF213Q63HN8 5207 aa9.6□□□□□ -0.87
HPS3-206ENST00000486530 PRAC1Q96KF2 57 aa9.59□□□□□ -0.87
HPS3-206ENST00000486530 FLGP20930 4061 aaPredicted RBP9.54□□□□□ -0.88
HPS3-206ENST00000486530 LCE2CQ5TA81 110 aa9.52□□□□□ -0.89
HPS3-206ENST00000486530 R4GN34 69 aa9.51□□□□□ -0.89
HPS3-206ENST00000486530 KRTAP12-2P59991 146 aa9.49□□□□□ -0.89
HPS3-206ENST00000486530 KRTAP12-1P59990 96 aa9.48□□□□□ -0.89
HPS3-206ENST00000486530 SPINT4Q6UDR6 99 aa9.44□□□□□ -0.9
HPS3-206ENST00000486530 ROMO1P60602 79 aa9.43□□□□□ -0.9
HPS3-206ENST00000486530 LORP23490 312 aaPredicted RBP9.41□□□□□ -0.9
HPS3-206ENST00000486530 LINC01554Q52M75 96 aa9.36□□□□□ -0.91
HPS3-206ENST00000486530 FAT4Q6V0I7 4981 aa9.3□□□□□ -0.92
HPS3-206ENST00000486530 MT1HP80294 61 aa9.29□□□□□ -0.92
HPS3-206ENST00000486530 KRTAP25-1Q3LHN0 102 aa9.28□□□□□ -0.92
HPS3-206ENST00000486530 CRIPTQ9P021 101 aa9.25□□□□□ -0.93
HPS3-206ENST00000486530 M0R2T5 61 aa9.21□□□□□ -0.93
HPS3-206ENST00000486530 KRTAP9-8Q9BYQ0 159 aa8.99□□□□□ -0.97
HPS3-206ENST00000486530 C10orf95Q9H7T3 257 aa8.97□□□□□ -0.97
HPS3-206ENST00000486530 CAMK2N1Q7Z7J9 78 aa8.96□□□□□ -0.97
HPS3-206ENST00000486530 MT2AP02795 61 aa8.96□□□□□ -0.98
HPS3-206ENST00000486530 SPRR2GQ9BYE4 73 aa8.96□□□□□ -0.98
HPS3-206ENST00000486530 LCE2AQ5TA79 106 aaPredicted RBP8.93□□□□□ -0.98
HPS3-206ENST00000486530 MT1FP04733 61 aa8.91□□□□□ -0.98
HPS3-206ENST00000486530 KRTAP19-1Q8IUB9 90 aa8.89□□□□□ -0.99
HPS3-206ENST00000486530 KRTAP10-10P60014 251 aa8.87□□□□□ -0.99
HPS3-206ENST00000486530 PLAC4Q8WY50 150 aa8.76□□□□□ -1.01
HPS3-206ENST00000486530 KRTAP9-3Q9BYQ3 159 aa8.66□□□□□ -1.02
HPS3-206ENST00000486530 KRTAP19-8Q3LI54 63 aa8.65□□□□□ -1.02
HPS3-206ENST00000486530 TNP1P09430 55 aa8.6□□□□□ -1.03
HPS3-206ENST00000486530 PP632Q6XCG6 107 aa8.59□□□□□ -1.03
HPS3-206ENST00000486530 MT1BP07438 61 aa8.5□□□□□ -1.05
HPS3-206ENST00000486530 KRTAP23-1A1A580 65 aa8.47□□□□□ -1.05
HPS3-206ENST00000486530 LCE2BO14633 110 aa8.4□□□□□ -1.07
HPS3-206ENST00000486530 MT1XP80297 61 aa8.33□□□□□ -1.08
HPS3-206ENST00000486530 KRTAP10-5P60370 271 aa8.32□□□□□ -1.08
HPS3-206ENST00000486530 KRTAP15-1Q3LI76 137 aa8.31□□□□□ -1.08
HPS3-206ENST00000486530 PRO2289Q9P1D8 64 aa8.19□□□□□ -1.1
HPS3-206ENST00000486530 LCE2DQ5TA82 110 aaPredicted RBP8.17□□□□□ -1.1
HPS3-206ENST00000486530 LCE3AQ5TA76 89 aa8.15□□□□□ -1.1
HPS3-206ENST00000486530 USH2AO75445 5202 aa8.14□□□□□ -1.11
HPS3-206ENST00000486530 KRTAP10-12P60413 245 aa8.05□□□□□ -1.12
HPS3-206ENST00000486530 FSIP2Q5CZC0 6907 aa8.04□□□□□ -1.12
HPS3-206ENST00000486530 KRTAP10-7P60409 375 aaPredicted RBP8.02□□□□□ -1.13
HPS3-206ENST00000486530 KRTAP8-1Q8IUC2 63 aa8□□□□□ -1.13
HPS3-206ENST00000486530 KRTAP9-2Q9BYQ4 174 aa7.97□□□□□ -1.13
HPS3-206ENST00000486530 SSPOA2VEC9 5147 aa7.89□□□□□ -1.15
HPS3-206ENST00000486530 NDUFAF8A1L188 74 aa7.86□□□□□ -1.15
HPS3-206ENST00000486530 KRTAP19-6Q3LI70 58 aa7.83□□□□□ -1.16
HPS3-206ENST00000486530 KRTAP12-3P60328 96 aa7.82□□□□□ -1.16
HPS3-206ENST00000486530 SPRR5A0A1B0GTR4 108 aa7.79□□□□□ -1.16
HPS3-206ENST00000486530 LUZP6Q538Z0 58 aa7.74□□□□□ -1.17
HPS3-206ENST00000486530 CRCT1Q9UGL9 99 aa7.67□□□□□ -1.18
HPS3-206ENST00000486530 KRTAP19-5Q3LI72 72 aa7.62□□□□□ -1.19
HPS3-206ENST00000486530 FCGBPQ9Y6R7 5405 aaPredicted RBP7.6□□□□□ -1.19
HPS3-206ENST00000486530 H3BS24 57 aa7.6□□□□□ -1.19
HPS3-206ENST00000486530 KRTAP4-8A0A0G2JLE6 195 aa7.59□□□□□ -1.19
HPS3-206ENST00000486530 KRTAP4-8Q9BYQ9 185 aa7.59□□□□□ -1.19
HPS3-206ENST00000486530 KMT2DO14686 5537 aa7.51□□□□□ -1.21
HPS3-206ENST00000486530 KRTAP19-7Q3SYF9 63 aa7.42□□□□□ -1.22
HPS3-206ENST00000486530 KRTAP9-6A0A140TA67 174 aa7.4□□□□□ -1.23
HPS3-206ENST00000486530 LCE3CQ5T5A8 94 aa7.33□□□□□ -1.24
HPS3-206ENST00000486530 MACF1Q9UPN3 7388 aaKnown RBP7.3□□□□□ -1.24
HPS3-206ENST00000486530 MT1EP04732 61 aa7.26□□□□□ -1.25
HPS3-206ENST00000486530 KRTAP19-4Q3LI73 84 aa7.25□□□□□ -1.25
HPS3-206ENST00000486530 MT1LQ93083 61 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms