RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 UQCRQO14949 82 aa8.41□□□□□ -1.06
CLDN11-206ENST00000486429 SMIM20Q8N5G0 67 aa8.4□□□□□ -1.06
CLDN11-206ENST00000486429 MACF1Q9UPN3 7388 aaKnown RBP8.4□□□□□ -1.07
CLDN11-206ENST00000486429 OCR1Q9BZK8 76 aa8.39□□□□□ -1.07
CLDN11-206ENST00000486429 H0Y9P7 68 aa8.38□□□□□ -1.07
CLDN11-206ENST00000486429 TRAV7A0A075B6U4 112 aa8.35□□□□□ -1.07
CLDN11-206ENST00000486429 ANAPC13Q9BS18 74 aa8.34□□□□□ -1.07
CLDN11-206ENST00000486429 SERP2Q8N6R1 65 aa8.33□□□□□ -1.08
CLDN11-206ENST00000486429 SYNE2Q8WXH0 6885 aaKnown RBP8.32□□□□□ -1.08
CLDN11-206ENST00000486429 KRTAP3-3Q9BYR6 98 aa8.32□□□□□ -1.08
CLDN11-206ENST00000486429 KLKP1Q107X0 134 aa8.26□□□□□ -1.09
CLDN11-206ENST00000486429 COX7CP15954 63 aa8.25□□□□□ -1.09
CLDN11-206ENST00000486429 SPRR2GQ9BYE4 73 aa8.25□□□□□ -1.09
CLDN11-206ENST00000486429 MP68P56378 58 aa8.24□□□□□ -1.09
CLDN11-206ENST00000486429 LINC00208Q96KT6 92 aa8.24□□□□□ -1.09
CLDN11-206ENST00000486429 Q5VV11 94 aa8.22□□□□□ -1.09
CLDN11-206ENST00000486429 A8MUN3 132 aa8.21□□□□□ -1.1
CLDN11-206ENST00000486429 NDUFC1O43677 76 aa8.2□□□□□ -1.1
CLDN11-206ENST00000486429 MT1BP07438 61 aa8.2□□□□□ -1.1
CLDN11-206ENST00000486429 KRTAP19-8Q3LI54 63 aa8.2□□□□□ -1.1
CLDN11-206ENST00000486429 H3BPC8 53 aa8.19□□□□□ -1.1
CLDN11-206ENST00000486429 C20orf197Q8N268 126 aa8.17□□□□□ -1.1
CLDN11-206ENST00000486429 CRIPTQ9P021 101 aa8.16□□□□□ -1.1
CLDN11-206ENST00000486429 PCP4P48539 62 aa8.15□□□□□ -1.1
CLDN11-206ENST00000486429 CCDC179H3BU77 68 aa8.14□□□□□ -1.11
CLDN11-206ENST00000486429 A6NN06 94 aa8.12□□□□□ -1.11
CLDN11-206ENST00000486429 SNURFQ9Y675 71 aa8.12□□□□□ -1.11
CLDN11-206ENST00000486429 H0YAA0 97 aa8.11□□□□□ -1.11
CLDN11-206ENST00000486429 KRTAP6-3Q3LI67 103 aa8.02□□□□□ -1.13
CLDN11-206ENST00000486429 ADM2Q7Z4H4 148 aa8.02□□□□□ -1.13
CLDN11-206ENST00000486429 CYSTM1Q9H1C7 97 aa8.02□□□□□ -1.13
CLDN11-206ENST00000486429 KRTAP10-5P60370 271 aa8.01□□□□□ -1.13
CLDN11-206ENST00000486429 DMAC1Q96GE9 116 aa7.98□□□□□ -1.13
CLDN11-206ENST00000486429 H7BZZ5 65 aa7.97□□□□□ -1.13
CLDN11-206ENST00000486429 SPANXA2-OT1Q8N9U9 137 aa7.91□□□□□ -1.14
CLDN11-206ENST00000486429 TMEM258P61165 79 aa7.87□□□□□ -1.15
CLDN11-206ENST00000486429 NEBP20929 6669 aa7.87□□□□□ -1.15
CLDN11-206ENST00000486429 P0C880 135 aa7.84□□□□□ -1.15
CLDN11-206ENST00000486429 R4GN34 69 aa7.84□□□□□ -1.15
CLDN11-206ENST00000486429 ATP5EP56381 51 aaPredicted RBP7.82□□□□□ -1.16
CLDN11-206ENST00000486429 M0QZ58 72 aa7.78□□□□□ -1.16
CLDN11-206ENST00000486429 ACYP2P14621 99 aa7.77□□□□□ -1.17
CLDN11-206ENST00000486429 PLAC4Q8WY50 150 aa7.76□□□□□ -1.17
CLDN11-206ENST00000486429 PRO2289Q9P1D8 64 aa7.76□□□□□ -1.17
CLDN11-206ENST00000486429 KRTAP3-2Q9BYR7 98 aa7.75□□□□□ -1.17
CLDN11-206ENST00000486429 SPTSSBQ8NFR3 76 aa7.71□□□□□ -1.18
CLDN11-206ENST00000486429 MT1XP80297 61 aa7.7□□□□□ -1.18
CLDN11-206ENST00000486429 CHKB-CPT1BH3BT56 60 aa7.68□□□□□ -1.18
CLDN11-206ENST00000486429 KRTAP5-9P26371 169 aa7.68□□□□□ -1.18
CLDN11-206ENST00000486429 MUC12Q9UKN1 5478 aa7.68□□□□□ -1.18
CLDN11-206ENST00000486429 LINC01554Q52M75 96 aa7.67□□□□□ -1.18
CLDN11-206ENST00000486429 COA5Q86WW8 74 aa7.66□□□□□ -1.18
CLDN11-206ENST00000486429 SERP1Q9Y6X1 66 aa7.63□□□□□ -1.19
CLDN11-206ENST00000486429 KMT2DO14686 5537 aa7.6□□□□□ -1.19
CLDN11-206ENST00000486429 MDN1Q9NU22 5596 aa7.54□□□□□ -1.2
CLDN11-206ENST00000486429 KRTAP12-2P59991 146 aa7.52□□□□□ -1.21
CLDN11-206ENST00000486429 RPS28P62857 69 aaKnown RBP7.51□□□□□ -1.21
CLDN11-206ENST00000486429 SPRR2FQ96RM1 72 aa7.47□□□□□ -1.21
CLDN11-206ENST00000486429 KRTAP8-1Q8IUC2 63 aa7.46□□□□□ -1.22
CLDN11-206ENST00000486429 KRTAP20-1Q3LI63 56 aa7.43□□□□□ -1.22
CLDN11-206ENST00000486429 SMIM26A0A096LP01 95 aa7.4□□□□□ -1.22
CLDN11-206ENST00000486429 SPRR2EP22531 72 aa7.36□□□□□ -1.23
CLDN11-206ENST00000486429 SPRR2BP35325 72 aa7.36□□□□□ -1.23
CLDN11-206ENST00000486429 SPRR2AP35326 72 aa7.36□□□□□ -1.23
CLDN11-206ENST00000486429 KRTAP10-7P60409 375 aaPredicted RBP7.34□□□□□ -1.23
CLDN11-206ENST00000486429 KRTAP4-8A0A0G2JLE6 195 aa7.33□□□□□ -1.24
CLDN11-206ENST00000486429 KRTAP13-4Q3LI77 160 aa7.33□□□□□ -1.24
CLDN11-206ENST00000486429 KRTAP4-8Q9BYQ9 185 aa7.33□□□□□ -1.24
CLDN11-206ENST00000486429 KRTAP10-12P60413 245 aa7.31□□□□□ -1.24
CLDN11-206ENST00000486429 LINC01558Q9Y6Z2 57 aa7.3□□□□□ -1.24
CLDN11-206ENST00000486429 V9GYY9 64 aa7.3□□□□□ -1.24
CLDN11-206ENST00000486429 Q1T7F1 81 aa7.28□□□□□ -1.24
CLDN11-206ENST00000486429 SEC61GP60059 68 aa7.26□□□□□ -1.25
CLDN11-206ENST00000486429 A0A1B0GU69 56 aa7.25□□□□□ -1.25
CLDN11-206ENST00000486429 LCE1AQ5T7P2 110 aa7.24□□□□□ -1.25
CLDN11-206ENST00000486429 KRTAP2-3P0C7H8 128 aa7.23□□□□□ -1.25
CLDN11-206ENST00000486429 CAMK2N1Q7Z7J9 78 aa7.23□□□□□ -1.25
CLDN11-206ENST00000486429 PRR15LQ9BU68 103 aa7.23□□□□□ -1.25
CLDN11-206ENST00000486429 KRTAP2-4Q9BYR9 128 aa7.23□□□□□ -1.25
CLDN11-206ENST00000486429 PSPHP1O15172 72 aa7.16□□□□□ -1.26
CLDN11-206ENST00000486429 A0A0D9SG42 100 aa7.13□□□□□ -1.27
CLDN11-206ENST00000486429 SPRR2DP22532 72 aa7.12□□□□□ -1.27
CLDN11-206ENST00000486429 A0A1B0GU33 70 aa7.1□□□□□ -1.27
CLDN11-206ENST00000486429 SPATA8Q6RVD6 105 aa7.1□□□□□ -1.27
CLDN11-206ENST00000486429 SPINT4Q6UDR6 99 aa7.03□□□□□ -1.28
CLDN11-206ENST00000486429 UQCR11O14957 56 aa7□□□□□ -1.29
CLDN11-206ENST00000486429 KRTAP2-2Q9BYT5 123 aa6.99□□□□□ -1.29
CLDN11-206ENST00000486429 KRTAP2-1Q9BYU5 128 aa6.99□□□□□ -1.29
CLDN11-206ENST00000486429 KRTAP12-1P59990 96 aa6.97□□□□□ -1.29
CLDN11-206ENST00000486429 A6NED7 52 aa6.96□□□□□ -1.3
CLDN11-206ENST00000486429 MIR22HGQ0VDD5 57 aa6.91□□□□□ -1.3
CLDN11-206ENST00000486429 LCE3BQ5TA77 95 aa6.91□□□□□ -1.3
CLDN11-206ENST00000486429 KRTAP19-7Q3SYF9 63 aa6.88□□□□□ -1.31
CLDN11-206ENST00000486429 A8MU10 97 aa6.85□□□□□ -1.31
CLDN11-206ENST00000486429 MT1EP04732 61 aa6.83□□□□□ -1.32
CLDN11-206ENST00000486429 CDC42SE1Q9NRR8 79 aa6.81□□□□□ -1.32
CLDN11-206ENST00000486429 KRTAP19-3Q7Z4W3 81 aa6.77□□□□□ -1.33
CLDN11-206ENST00000486429 LCE5AQ5TCM9 118 aa6.76□□□□□ -1.33
CLDN11-206ENST00000486429 BRK1Q8WUW1 75 aa6.74□□□□□ -1.33
CLDN11-206ENST00000486429 KRTAP19-5Q3LI72 72 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms