RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 CHKB-CPT1BH3BT56 60 aa6.58□□□□□ -1.36
VTI1BP1-201ENST00000486325 COA5Q86WW8 74 aa6.57□□□□□ -1.36
VTI1BP1-201ENST00000486325 SERP1Q9Y6X1 66 aa6.56□□□□□ -1.36
VTI1BP1-201ENST00000486325 S4R3F8 94 aa6.56□□□□□ -1.36
VTI1BP1-201ENST00000486325 SPTSSBQ8NFR3 76 aa6.55□□□□□ -1.36
VTI1BP1-201ENST00000486325 MUC2Q02817 5179 aa6.55□□□□□ -1.36
VTI1BP1-201ENST00000486325 LORP23490 312 aaPredicted RBP6.53□□□□□ -1.36
VTI1BP1-201ENST00000486325 RPS28P62857 69 aaKnown RBP6.51□□□□□ -1.37
VTI1BP1-201ENST00000486325 LCA10Q71F78 164 aa6.5□□□□□ -1.37
VTI1BP1-201ENST00000486325 CSAG1Q6PB30 78 aa6.49□□□□□ -1.37
VTI1BP1-201ENST00000486325 FLGP20930 4061 aaPredicted RBP6.44□□□□□ -1.38
VTI1BP1-201ENST00000486325 H3BS24 57 aa6.43□□□□□ -1.38
VTI1BP1-201ENST00000486325 FAT4Q6V0I7 4981 aa6.42□□□□□ -1.38
VTI1BP1-201ENST00000486325 MT1HP80294 61 aa6.41□□□□□ -1.38
VTI1BP1-201ENST00000486325 M0R2T5 61 aa6.4□□□□□ -1.38
VTI1BP1-201ENST00000486325 SMIM26A0A096LP01 95 aa6.38□□□□□ -1.39
VTI1BP1-201ENST00000486325 V9GYY9 64 aa6.34□□□□□ -1.39
VTI1BP1-201ENST00000486325 SEC61GP60059 68 aa6.32□□□□□ -1.4
VTI1BP1-201ENST00000486325 H0YAA0 97 aa6.31□□□□□ -1.4
VTI1BP1-201ENST00000486325 LINC01558Q9Y6Z2 57 aa6.3□□□□□ -1.4
VTI1BP1-201ENST00000486325 Q1T7F1 81 aa6.28□□□□□ -1.4
VTI1BP1-201ENST00000486325 PRR15LQ9BU68 103 aa6.27□□□□□ -1.41
VTI1BP1-201ENST00000486325 A0A1B0GU69 56 aa6.25□□□□□ -1.41
VTI1BP1-201ENST00000486325 ADM2Q7Z4H4 148 aa6.24□□□□□ -1.41
VTI1BP1-201ENST00000486325 KRTAP10-6P60371 365 aaPredicted RBP6.22□□□□□ -1.41
VTI1BP1-201ENST00000486325 KRTAP9-8Q9BYQ0 159 aa6.16□□□□□ -1.42
VTI1BP1-201ENST00000486325 P0C880 135 aa6.15□□□□□ -1.42
VTI1BP1-201ENST00000486325 CRIPTQ9P021 101 aa6.14□□□□□ -1.43
VTI1BP1-201ENST00000486325 PSPHP1O15172 72 aa6.13□□□□□ -1.43
VTI1BP1-201ENST00000486325 A0A1B0GU33 70 aa6.12□□□□□ -1.43
VTI1BP1-201ENST00000486325 MT2AP02795 61 aa6.12□□□□□ -1.43
VTI1BP1-201ENST00000486325 KRTAP10-10P60014 251 aa6.12□□□□□ -1.43
VTI1BP1-201ENST00000486325 M0QZ58 72 aa6.09□□□□□ -1.43
VTI1BP1-201ENST00000486325 Q5VV11 94 aa6.07□□□□□ -1.44
VTI1BP1-201ENST00000486325 UQCR11O14957 56 aa6.06□□□□□ -1.44
VTI1BP1-201ENST00000486325 MT1FP04733 61 aa6.06□□□□□ -1.44
VTI1BP1-201ENST00000486325 R4GN34 69 aa6.06□□□□□ -1.44
VTI1BP1-201ENST00000486325 SVIPQ8NHG7 77 aa5.99□□□□□ -1.45
VTI1BP1-201ENST00000486325 A6NED7 52 aa5.98□□□□□ -1.45
VTI1BP1-201ENST00000486325 SPRR2GQ9BYE4 73 aa5.97□□□□□ -1.45
VTI1BP1-201ENST00000486325 KRTAP9-3Q9BYQ3 159 aa5.96□□□□□ -1.46
VTI1BP1-201ENST00000486325 MIR22HGQ0VDD5 57 aa5.95□□□□□ -1.46
VTI1BP1-201ENST00000486325 SPATA8Q6RVD6 105 aa5.95□□□□□ -1.46
VTI1BP1-201ENST00000486325 KRTAP13-4Q3LI77 160 aa5.94□□□□□ -1.46
VTI1BP1-201ENST00000486325 KRTAP19-1Q8IUB9 90 aa5.92□□□□□ -1.46
VTI1BP1-201ENST00000486325 LINC01554Q52M75 96 aa5.89□□□□□ -1.47
VTI1BP1-201ENST00000486325 A0A0D9SG42 100 aa5.86□□□□□ -1.47
VTI1BP1-201ENST00000486325 A6NN06 94 aa5.86□□□□□ -1.47
VTI1BP1-201ENST00000486325 CDC42SE1Q9NRR8 79 aa5.86□□□□□ -1.47
VTI1BP1-201ENST00000486325 A8MU10 97 aa5.83□□□□□ -1.48
VTI1BP1-201ENST00000486325 KRTAP19-8Q3LI54 63 aa5.83□□□□□ -1.48
VTI1BP1-201ENST00000486325 PLAC4Q8WY50 150 aa5.8□□□□□ -1.48
VTI1BP1-201ENST00000486325 K7ERS5 55 aa5.79□□□□□ -1.48
VTI1BP1-201ENST00000486325 SPINT4Q6UDR6 99 aa5.77□□□□□ -1.49
VTI1BP1-201ENST00000486325 BRK1Q8WUW1 75 aa5.77□□□□□ -1.49
VTI1BP1-201ENST00000486325 KRTAP12-1P59990 96 aa5.75□□□□□ -1.49
VTI1BP1-201ENST00000486325 MT1BP07438 61 aa5.72□□□□□ -1.49
VTI1BP1-201ENST00000486325 KRTAP12-2P59991 146 aa5.7□□□□□ -1.5
VTI1BP1-201ENST00000486325 CAMK2N1Q7Z7J9 78 aa5.67□□□□□ -1.5
VTI1BP1-201ENST00000486325 KRTAP9-2Q9BYQ4 174 aa5.61□□□□□ -1.51
VTI1BP1-201ENST00000486325 PRO0628Q9UI54 55 aa5.6□□□□□ -1.51
VTI1BP1-201ENST00000486325 USH2AO75445 5202 aa5.58□□□□□ -1.52
VTI1BP1-201ENST00000486325 PRO2289Q9P1D8 64 aa5.57□□□□□ -1.52
VTI1BP1-201ENST00000486325 KRTAP19-6Q3LI70 58 aa5.52□□□□□ -1.53
VTI1BP1-201ENST00000486325 KRTAP10-5P60370 271 aa5.5□□□□□ -1.53
VTI1BP1-201ENST00000486325 MT1XP80297 61 aa5.5□□□□□ -1.53
VTI1BP1-201ENST00000486325 PMAIP1Q13794 54 aa5.5□□□□□ -1.53
VTI1BP1-201ENST00000486325 ROMO1P60602 79 aa5.46□□□□□ -1.54
VTI1BP1-201ENST00000486325 C10orf95Q9H7T3 257 aa5.45□□□□□ -1.54
VTI1BP1-201ENST00000486325 SSPOA2VEC9 5147 aa5.44□□□□□ -1.54
VTI1BP1-201ENST00000486325 CRCT1Q9UGL9 99 aa5.43□□□□□ -1.54
VTI1BP1-201ENST00000486325 KRTAP23-1A1A580 65 aa5.4□□□□□ -1.54
VTI1BP1-201ENST00000486325 LOC100996750A0A140TA64 210 aa5.39□□□□□ -1.55
VTI1BP1-201ENST00000486325 KRTAP4-6Q9BYQ5 205 aa5.39□□□□□ -1.55
VTI1BP1-201ENST00000486325 TNP1P09430 55 aa5.38□□□□□ -1.55
VTI1BP1-201ENST00000486325 FSIP2Q5CZC0 6907 aa5.36□□□□□ -1.55
VTI1BP1-201ENST00000486325 KRTAP25-1Q3LHN0 102 aa5.36□□□□□ -1.55
VTI1BP1-201ENST00000486325 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
VTI1BP1-201ENST00000486325 KRTAP10-7P60409 375 aaPredicted RBP5.26□□□□□ -1.57
VTI1BP1-201ENST00000486325 KRTAP9-6A0A140TA67 174 aa5.25□□□□□ -1.57
VTI1BP1-201ENST00000486325 KRTAP10-12P60413 245 aa5.25□□□□□ -1.57
VTI1BP1-201ENST00000486325 FCGBPQ9Y6R7 5405 aaPredicted RBP5.23□□□□□ -1.57
VTI1BP1-201ENST00000486325 KTN1-AS1Q86SY8 53 aa5.19□□□□□ -1.58
VTI1BP1-201ENST00000486325 PP632Q6XCG6 107 aa5.17□□□□□ -1.58
VTI1BP1-201ENST00000486325 LCE3AQ5TA76 89 aa5.1□□□□□ -1.59
VTI1BP1-201ENST00000486325 KRTAP4-8A0A0G2JLE6 195 aa5.08□□□□□ -1.6
VTI1BP1-201ENST00000486325 KRTAP4-8Q9BYQ9 185 aa5.08□□□□□ -1.6
VTI1BP1-201ENST00000486325 PRAC1Q96KF2 57 aa5.07□□□□□ -1.6
VTI1BP1-201ENST00000486325 KRTAP8-1Q8IUC2 63 aa5.05□□□□□ -1.6
VTI1BP1-201ENST00000486325 KRTAP9-1A8MXZ3 250 aaPredicted RBP5□□□□□ -1.61
VTI1BP1-201ENST00000486325 A0A0A0MQY5 61 aa4.95□□□□□ -1.62
VTI1BP1-201ENST00000486325 KRTAP12-3P60328 96 aa4.94□□□□□ -1.62
VTI1BP1-201ENST00000486325 KRTAP19-5Q3LI72 72 aa4.94□□□□□ -1.62
VTI1BP1-201ENST00000486325 KRTAP4-12Q9BQ66 201 aa4.94□□□□□ -1.62
VTI1BP1-201ENST00000486325 MACF1Q9UPN3 7388 aaKnown RBP4.93□□□□□ -1.62
VTI1BP1-201ENST00000486325 KMT2DO14686 5537 aa4.92□□□□□ -1.62
VTI1BP1-201ENST00000486325 KRTAP6-3Q3LI67 103 aa4.9□□□□□ -1.63
VTI1BP1-201ENST00000486325 KRTAP19-7Q3SYF9 63 aa4.9□□□□□ -1.63
VTI1BP1-201ENST00000486325 KRTAP5-9P26371 169 aa4.88□□□□□ -1.63
VTI1BP1-201ENST00000486325 SPRR2FQ96RM1 72 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms