RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 LCA10Q71F78 164 aa7.62□□□□□ -1.19
APOE-205ENST00000485628 S4R3F8 94 aa7.61□□□□□ -1.19
APOE-205ENST00000485628 M0R2T5 61 aa7.6□□□□□ -1.19
APOE-205ENST00000485628 KRTAP9-8Q9BYQ0 159 aa7.58□□□□□ -1.2
APOE-205ENST00000485628 ACYP2P14621 99 aa7.56□□□□□ -1.2
APOE-205ENST00000485628 CSAG1Q6PB30 78 aa7.51□□□□□ -1.21
APOE-205ENST00000485628 MT2AP02795 61 aa7.47□□□□□ -1.21
APOE-205ENST00000485628 MT1FP04733 61 aa7.42□□□□□ -1.22
APOE-205ENST00000485628 PCP4P48539 62 aa7.41□□□□□ -1.22
APOE-205ENST00000485628 TMEM258P61165 79 aa7.4□□□□□ -1.22
APOE-205ENST00000485628 H0YAA0 97 aa7.39□□□□□ -1.23
APOE-205ENST00000485628 ATP5EP56381 51 aaPredicted RBP7.39□□□□□ -1.23
APOE-205ENST00000485628 COA5Q86WW8 74 aa7.39□□□□□ -1.23
APOE-205ENST00000485628 CHKB-CPT1BH3BT56 60 aa7.32□□□□□ -1.24
APOE-205ENST00000485628 KRTAP9-3Q9BYQ3 159 aa7.32□□□□□ -1.24
APOE-205ENST00000485628 KRTAP10-10P60014 251 aa7.31□□□□□ -1.24
APOE-205ENST00000485628 LCE2DQ5TA82 110 aaPredicted RBP7.31□□□□□ -1.24
APOE-205ENST00000485628 SPTSSBQ8NFR3 76 aa7.31□□□□□ -1.24
APOE-205ENST00000485628 KRTAP3-2Q9BYR7 98 aa7.29□□□□□ -1.24
APOE-205ENST00000485628 ADM2Q7Z4H4 148 aa7.23□□□□□ -1.25
APOE-205ENST00000485628 P0C880 135 aa7.19□□□□□ -1.26
APOE-205ENST00000485628 KRTAP19-1Q8IUB9 90 aa7.19□□□□□ -1.26
APOE-205ENST00000485628 CRIPTQ9P021 101 aa7.17□□□□□ -1.26
APOE-205ENST00000485628 SERP1Q9Y6X1 66 aa7.17□□□□□ -1.26
APOE-205ENST00000485628 LCE2BO14633 110 aa7.16□□□□□ -1.26
APOE-205ENST00000485628 SPRR2GQ9BYE4 73 aa7.16□□□□□ -1.26
APOE-205ENST00000485628 KRTAP9-2Q9BYQ4 174 aa7.15□□□□□ -1.26
APOE-205ENST00000485628 KRTAP19-8Q3LI54 63 aa7.06□□□□□ -1.28
APOE-205ENST00000485628 RPS28P62857 69 aaKnown RBP7.05□□□□□ -1.28
APOE-205ENST00000485628 LINC01558Q9Y6Z2 57 aa7.04□□□□□ -1.28
APOE-205ENST00000485628 MT1BP07438 61 aa6.98□□□□□ -1.29
APOE-205ENST00000485628 SEC61GP60059 68 aa6.98□□□□□ -1.29
APOE-205ENST00000485628 R4GN34 69 aa6.98□□□□□ -1.29
APOE-205ENST00000485628 USH2AO75445 5202 aa6.98□□□□□ -1.29
APOE-205ENST00000485628 M0QZ58 72 aa6.97□□□□□ -1.29
APOE-205ENST00000485628 A0A1B0GU69 56 aa6.96□□□□□ -1.3
APOE-205ENST00000485628 KRTAP13-4Q3LI77 160 aa6.95□□□□□ -1.3
APOE-205ENST00000485628 Q1T7F1 81 aa6.93□□□□□ -1.3
APOE-205ENST00000485628 SMIM26A0A096LP01 95 aa6.92□□□□□ -1.3
APOE-205ENST00000485628 Q5VV11 94 aa6.91□□□□□ -1.3
APOE-205ENST00000485628 A0A1B0GU33 70 aa6.9□□□□□ -1.3
APOE-205ENST00000485628 V9GYY9 64 aa6.87□□□□□ -1.31
APOE-205ENST00000485628 PRR15LQ9BU68 103 aa6.86□□□□□ -1.31
APOE-205ENST00000485628 FSIP2Q5CZC0 6907 aa6.86□□□□□ -1.31
APOE-205ENST00000485628 SSPOA2VEC9 5147 aa6.84□□□□□ -1.31
APOE-205ENST00000485628 CRCT1Q9UGL9 99 aa6.84□□□□□ -1.31
APOE-205ENST00000485628 KRTAP19-6Q3LI70 58 aa6.83□□□□□ -1.32
APOE-205ENST00000485628 A6NN06 94 aa6.82□□□□□ -1.32
APOE-205ENST00000485628 SPATA8Q6RVD6 105 aa6.8□□□□□ -1.32
APOE-205ENST00000485628 LINC01554Q52M75 96 aa6.76□□□□□ -1.33
APOE-205ENST00000485628 PSPHP1O15172 72 aa6.73□□□□□ -1.33
APOE-205ENST00000485628 KRTAP9-6A0A140TA67 174 aa6.72□□□□□ -1.33
APOE-205ENST00000485628 UQCR11O14957 56 aa6.7□□□□□ -1.34
APOE-205ENST00000485628 PLAC4Q8WY50 150 aa6.7□□□□□ -1.34
APOE-205ENST00000485628 KRTAP10-5P60370 271 aa6.69□□□□□ -1.34
APOE-205ENST00000485628 KRTAP12-1P59990 96 aa6.66□□□□□ -1.34
APOE-205ENST00000485628 A0A0D9SG42 100 aa6.65□□□□□ -1.34
APOE-205ENST00000485628 A8MU10 97 aa6.65□□□□□ -1.34
APOE-205ENST00000485628 MT1XP80297 61 aa6.65□□□□□ -1.34
APOE-205ENST00000485628 FCGBPQ9Y6R7 5405 aaPredicted RBP6.62□□□□□ -1.35
APOE-205ENST00000485628 KRTAP12-2P59991 146 aa6.6□□□□□ -1.35
APOE-205ENST00000485628 MIR22HGQ0VDD5 57 aa6.59□□□□□ -1.35
APOE-205ENST00000485628 PRO2289Q9P1D8 64 aa6.52□□□□□ -1.37
APOE-205ENST00000485628 SPINT4Q6UDR6 99 aa6.51□□□□□ -1.37
APOE-205ENST00000485628 A6NED7 52 aa6.5□□□□□ -1.37
APOE-205ENST00000485628 CAMK2N1Q7Z7J9 78 aa6.44□□□□□ -1.38
APOE-205ENST00000485628 CDC42SE1Q9NRR8 79 aa6.41□□□□□ -1.38
APOE-205ENST00000485628 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.36□□□□□ -1.39
APOE-205ENST00000485628 KRTAP10-7P60409 375 aaPredicted RBP6.34□□□□□ -1.39
APOE-205ENST00000485628 KRTAP10-12P60413 245 aa6.34□□□□□ -1.39
APOE-205ENST00000485628 C10orf95Q9H7T3 257 aa6.33□□□□□ -1.4
APOE-205ENST00000485628 MACF1Q9UPN3 7388 aaKnown RBP6.3□□□□□ -1.4
APOE-205ENST00000485628 K7ERS5 55 aa6.28□□□□□ -1.4
APOE-205ENST00000485628 KRTAP4-8A0A0G2JLE6 195 aa6.18□□□□□ -1.42
APOE-205ENST00000485628 KRTAP4-8Q9BYQ9 185 aa6.18□□□□□ -1.42
APOE-205ENST00000485628 BRK1Q8WUW1 75 aa6.14□□□□□ -1.43
APOE-205ENST00000485628 KMT2DO14686 5537 aa6.14□□□□□ -1.43
APOE-205ENST00000485628 TNP1P09430 55 aa6.13□□□□□ -1.43
APOE-205ENST00000485628 KRTAP6-3Q3LI67 103 aa6.13□□□□□ -1.43
APOE-205ENST00000485628 KRTAP5-9P26371 169 aa6.11□□□□□ -1.43
APOE-205ENST00000485628 SYNE2Q8WXH0 6885 aaKnown RBP6.11□□□□□ -1.43
APOE-205ENST00000485628 KRTAP9-7A8MTY7 169 aa6.1□□□□□ -1.43
APOE-205ENST00000485628 KRTAP25-1Q3LHN0 102 aa6.06□□□□□ -1.44
APOE-205ENST00000485628 KRTAP8-1Q8IUC2 63 aa6.06□□□□□ -1.44
APOE-205ENST00000485628 ROMO1P60602 79 aa6.04□□□□□ -1.44
APOE-205ENST00000485628 LCE3AQ5TA76 89 aa5.98□□□□□ -1.45
APOE-205ENST00000485628 KRTAP19-7Q3SYF9 63 aa5.96□□□□□ -1.46
APOE-205ENST00000485628 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
APOE-205ENST00000485628 SPRR2FQ96RM1 72 aa5.92□□□□□ -1.46
APOE-205ENST00000485628 KRTAP19-5Q3LI72 72 aa5.88□□□□□ -1.47
APOE-205ENST00000485628 PRO0628Q9UI54 55 aa5.88□□□□□ -1.47
APOE-205ENST00000485628 MT1EP04732 61 aa5.85□□□□□ -1.47
APOE-205ENST00000485628 MUC12Q9UKN1 5478 aa5.83□□□□□ -1.48
APOE-205ENST00000485628 PMAIP1Q13794 54 aa5.82□□□□□ -1.48
APOE-205ENST00000485628 LCE1AQ5T7P2 110 aa5.8□□□□□ -1.48
APOE-205ENST00000485628 PP632Q6XCG6 107 aa5.76□□□□□ -1.49
APOE-205ENST00000485628 KRTAP12-3P60328 96 aa5.75□□□□□ -1.49
APOE-205ENST00000485628 MDN1Q9NU22 5596 aa5.72□□□□□ -1.49
APOE-205ENST00000485628 SPRR2EP22531 72 aa5.71□□□□□ -1.5
APOE-205ENST00000485628 SPRR2BP35325 72 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 214.3 ms