RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 TRAV7A0A075B6U4 112 aa3.22□□□□□ -1.89
NCL-209ENST00000484328 H3BPC8 53 aa3.22□□□□□ -1.89
NCL-209ENST00000484328 MT1HP80294 61 aa3.22□□□□□ -1.89
NCL-209ENST00000484328 COX6B2Q6YFQ2 88 aa3.21□□□□□ -1.9
NCL-209ENST00000484328 MP68P56378 58 aa3.2□□□□□ -1.9
NCL-209ENST00000484328 C1orf64Q8NEQ6 169 aa3.2□□□□□ -1.9
NCL-209ENST00000484328 LINC00208Q96KT6 92 aa3.2□□□□□ -1.9
NCL-209ENST00000484328 C4orf26Q17RF5 130 aa3.19□□□□□ -1.9
NCL-209ENST00000484328 SERP2Q8N6R1 65 aa3.19□□□□□ -1.9
NCL-209ENST00000484328 FAM236DA0A1B0GTK5 79 aa3.18□□□□□ -1.9
NCL-209ENST00000484328 FAM236CP0DP71 79 aa3.18□□□□□ -1.9
NCL-209ENST00000484328 KRTAP3-1Q9BYR8 98 aa3.18□□□□□ -1.9
NCL-209ENST00000484328 FLGP20930 4061 aaPredicted RBP3.18□□□□□ -1.9
NCL-209ENST00000484328 KLKP1Q107X0 134 aa3.17□□□□□ -1.9
NCL-209ENST00000484328 H1FX-AS1Q4G0G2 97 aa3.16□□□□□ -1.9
NCL-209ENST00000484328 COX7CP15954 63 aa3.14□□□□□ -1.91
NCL-209ENST00000484328 A8MUN3 132 aa3.13□□□□□ -1.91
NCL-209ENST00000484328 C20orf197Q8N268 126 aa3.13□□□□□ -1.91
NCL-209ENST00000484328 KRTAP10-6P60371 365 aaPredicted RBP3.12□□□□□ -1.91
NCL-209ENST00000484328 SNURFQ9Y675 71 aa3.12□□□□□ -1.91
NCL-209ENST00000484328 M0R2T5 61 aa3.11□□□□□ -1.91
NCL-209ENST00000484328 DMAC1Q96GE9 116 aa3.11□□□□□ -1.91
NCL-209ENST00000484328 ANAPC13Q9BS18 74 aa3.11□□□□□ -1.91
NCL-209ENST00000484328 LCA10Q71F78 164 aa3.09□□□□□ -1.91
NCL-209ENST00000484328 SPANXA2-OT1Q8N9U9 137 aa3.09□□□□□ -1.91
NCL-209ENST00000484328 S4R3F8 94 aa3.09□□□□□ -1.91
NCL-209ENST00000484328 CYSTM1Q9H1C7 97 aa3.08□□□□□ -1.92
NCL-209ENST00000484328 NDUFC1O43677 76 aa3.07□□□□□ -1.92
NCL-209ENST00000484328 H7BZZ5 65 aa3.06□□□□□ -1.92
NCL-209ENST00000484328 CCDC179H3BU77 68 aa3.05□□□□□ -1.92
NCL-209ENST00000484328 MT2AP02795 61 aa3.05□□□□□ -1.92
NCL-209ENST00000484328 CSAG1Q6PB30 78 aa3.04□□□□□ -1.92
NCL-209ENST00000484328 MT1FP04733 61 aa3.03□□□□□ -1.92
NCL-209ENST00000484328 ACYP2P14621 99 aa3.03□□□□□ -1.92
NCL-209ENST00000484328 H0YAA0 97 aa3□□□□□ -1.93
NCL-209ENST00000484328 ATP5EP56381 51 aaPredicted RBP2.97□□□□□ -1.93
NCL-209ENST00000484328 KRTAP10-10P60014 251 aa2.97□□□□□ -1.93
NCL-209ENST00000484328 TMEM258P61165 79 aa2.97□□□□□ -1.93
NCL-209ENST00000484328 COA5Q86WW8 74 aa2.97□□□□□ -1.93
NCL-209ENST00000484328 H3BS24 57 aa2.96□□□□□ -1.94
NCL-209ENST00000484328 CHKB-CPT1BH3BT56 60 aa2.96□□□□□ -1.94
NCL-209ENST00000484328 SPTSSBQ8NFR3 76 aa2.95□□□□□ -1.94
NCL-209ENST00000484328 PCP4P48539 62 aa2.92□□□□□ -1.94
NCL-209ENST00000484328 ADM2Q7Z4H4 148 aa2.92□□□□□ -1.94
NCL-209ENST00000484328 SPRR2GQ9BYE4 73 aa2.92□□□□□ -1.94
NCL-209ENST00000484328 CRIPTQ9P021 101 aa2.92□□□□□ -1.94
NCL-209ENST00000484328 P0C880 135 aa2.9□□□□□ -1.95
NCL-209ENST00000484328 KRTAP19-8Q3LI54 63 aa2.87□□□□□ -1.95
NCL-209ENST00000484328 SERP1Q9Y6X1 66 aa2.86□□□□□ -1.95
NCL-209ENST00000484328 FSIP2Q5CZC0 6907 aa2.85□□□□□ -1.95
NCL-209ENST00000484328 MT1BP07438 61 aa2.84□□□□□ -1.95
NCL-209ENST00000484328 USH2AO75445 5202 aa2.83□□□□□ -1.96
NCL-209ENST00000484328 R4GN34 69 aa2.83□□□□□ -1.96
NCL-209ENST00000484328 M0QZ58 72 aa2.82□□□□□ -1.96
NCL-209ENST00000484328 CRCT1Q9UGL9 99 aa2.82□□□□□ -1.96
NCL-209ENST00000484328 SEC61GP60059 68 aa2.81□□□□□ -1.96
NCL-209ENST00000484328 Q5VV11 94 aa2.81□□□□□ -1.96
NCL-209ENST00000484328 SSPOA2VEC9 5147 aa2.8□□□□□ -1.96
NCL-209ENST00000484328 A0A1B0GU69 56 aa2.8□□□□□ -1.96
NCL-209ENST00000484328 KRTAP13-4Q3LI77 160 aa2.8□□□□□ -1.96
NCL-209ENST00000484328 LINC01558Q9Y6Z2 57 aa2.8□□□□□ -1.96
NCL-209ENST00000484328 KRTAP19-6Q3LI70 58 aa2.79□□□□□ -1.96
NCL-209ENST00000484328 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.79□□□□□ -1.96
NCL-209ENST00000484328 RPS28P62857 69 aaKnown RBP2.78□□□□□ -1.96
NCL-209ENST00000484328 A0A1B0GU33 70 aa2.77□□□□□ -1.97
NCL-209ENST00000484328 A6NN06 94 aa2.77□□□□□ -1.97
NCL-209ENST00000484328 Q1T7F1 81 aa2.76□□□□□ -1.97
NCL-209ENST00000484328 PRR15LQ9BU68 103 aa2.76□□□□□ -1.97
NCL-209ENST00000484328 SMIM26A0A096LP01 95 aa2.75□□□□□ -1.97
NCL-209ENST00000484328 LINC01554Q52M75 96 aa2.74□□□□□ -1.97
NCL-209ENST00000484328 V9GYY9 64 aa2.74□□□□□ -1.97
NCL-209ENST00000484328 KRTAP10-5P60370 271 aa2.73□□□□□ -1.97
NCL-209ENST00000484328 SPATA8Q6RVD6 105 aa2.73□□□□□ -1.97
NCL-209ENST00000484328 MT1XP80297 61 aa2.71□□□□□ -1.98
NCL-209ENST00000484328 PLAC4Q8WY50 150 aa2.71□□□□□ -1.98
NCL-209ENST00000484328 FCGBPQ9Y6R7 5405 aaPredicted RBP2.7□□□□□ -1.98
NCL-209ENST00000484328 MACF1Q9UPN3 7388 aaKnown RBP2.69□□□□□ -1.98
NCL-209ENST00000484328 A0A0D9SG42 100 aa2.68□□□□□ -1.98
NCL-209ENST00000484328 UQCR11O14957 56 aa2.68□□□□□ -1.98
NCL-209ENST00000484328 PSPHP1O15172 72 aa2.68□□□□□ -1.98
NCL-209ENST00000484328 KRTAP12-1P59990 96 aa2.68□□□□□ -1.98
NCL-209ENST00000484328 A8MU10 97 aa2.67□□□□□ -1.98
NCL-209ENST00000484328 PRO2289Q9P1D8 64 aa2.67□□□□□ -1.98
NCL-209ENST00000484328 KRTAP12-2P59991 146 aa2.66□□□□□ -1.98
NCL-209ENST00000484328 MIR22HGQ0VDD5 57 aa2.64□□□□□ -1.99
NCL-209ENST00000484328 SPINT4Q6UDR6 99 aa2.62□□□□□ -1.99
NCL-209ENST00000484328 CAMK2N1Q7Z7J9 78 aa2.62□□□□□ -1.99
NCL-209ENST00000484328 A6NED7 52 aa2.6□□□□□ -1.99
NCL-209ENST00000484328 SYNE2Q8WXH0 6885 aaKnown RBP2.59□□□□□ -2
NCL-209ENST00000484328 KRTAP10-12P60413 245 aa2.58□□□□□ -2
NCL-209ENST00000484328 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
NCL-209ENST00000484328 KRTAP10-7P60409 375 aaPredicted RBP2.57□□□□□ -2
NCL-209ENST00000484328 CDC42SE1Q9NRR8 79 aa2.56□□□□□ -2
NCL-209ENST00000484328 C10orf95Q9H7T3 257 aa2.54□□□□□ -2
NCL-209ENST00000484328 K7ERS5 55 aa2.53□□□□□ -2
NCL-209ENST00000484328 KRTAP6-3Q3LI67 103 aa2.53□□□□□ -2
NCL-209ENST00000484328 KRTAP5-9P26371 169 aa2.51□□□□□ -2.01
NCL-209ENST00000484328 KRTAP15-1Q3LI76 137 aa2.49□□□□□ -2.01
NCL-209ENST00000484328 TNP1P09430 55 aa2.48□□□□□ -2.01
NCL-209ENST00000484328 KRTAP8-1Q8IUC2 63 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms