RNA–Protein interactions for RNA: ENST00000484266.5

CHKB-210, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 1,401 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-210ENST00000484266 KRTAP9-6A0A140TA67 174 aa15.36■□□□□ 0.05
CHKB-210ENST00000484266 FSIP2Q5CZC0 6907 aa15.33■□□□□ 0.04
CHKB-210ENST00000484266 CRCT1Q9UGL9 99 aa15.32■□□□□ 0.04
CHKB-210ENST00000484266 LCE2BO14633 110 aa15.27■□□□□ 0.04
CHKB-210ENST00000484266 DMAC1Q96GE9 116 aa15.23■□□□□ 0.03
CHKB-210ENST00000484266 NDUFC1O43677 76 aa15.22■□□□□ 0.03
CHKB-210ENST00000484266 SERP2Q8N6R1 65 aa15.21■□□□□ 0.03
CHKB-210ENST00000484266 SNURFQ9Y675 71 aa15.17■□□□□ 0.02
CHKB-210ENST00000484266 USH2AO75445 5202 aa15.14■□□□□ 0.01
CHKB-210ENST00000484266 C20orf197Q8N268 126 aa15.09■□□□□ 0.01
CHKB-210ENST00000484266 H0YAA0 97 aa14.95□□□□□ -0.02
CHKB-210ENST00000484266 KRTAP19-1Q8IUB9 90 aa14.94□□□□□ -0.02
CHKB-210ENST00000484266 ACYP2P14621 99 aa14.93□□□□□ -0.02
CHKB-210ENST00000484266 COX7CP15954 63 aa14.91□□□□□ -0.02
CHKB-210ENST00000484266 SSPOA2VEC9 5147 aa14.87□□□□□ -0.03
CHKB-210ENST00000484266 SPANXA2-OT1Q8N9U9 137 aa14.87□□□□□ -0.03
CHKB-210ENST00000484266 SPRR2GQ9BYE4 73 aa14.83□□□□□ -0.04
CHKB-210ENST00000484266 ADM2Q7Z4H4 148 aa14.81□□□□□ -0.04
CHKB-210ENST00000484266 CRIPTQ9P021 101 aa14.76□□□□□ -0.05
CHKB-210ENST00000484266 ANAPC13Q9BS18 74 aa14.67□□□□□ -0.06
CHKB-210ENST00000484266 CHKB-CPT1BH3BT56 60 aa14.66□□□□□ -0.06
CHKB-210ENST00000484266 KRTAP19-8Q3LI54 63 aa14.65□□□□□ -0.06
CHKB-210ENST00000484266 KRTAP19-6Q3LI70 58 aa14.64□□□□□ -0.07
CHKB-210ENST00000484266 CYSTM1Q9H1C7 97 aa14.64□□□□□ -0.07
CHKB-210ENST00000484266 SPTSSBQ8NFR3 76 aa14.62□□□□□ -0.07
CHKB-210ENST00000484266 PCP4P48539 62 aa14.61□□□□□ -0.07
CHKB-210ENST00000484266 MT1BP07438 61 aa14.58□□□□□ -0.07
CHKB-210ENST00000484266 H7BZZ5 65 aa14.58□□□□□ -0.08
CHKB-210ENST00000484266 P0C880 135 aa14.58□□□□□ -0.08
CHKB-210ENST00000484266 Q5VV11 94 aa14.57□□□□□ -0.08
CHKB-210ENST00000484266 KRTAP3-2Q9BYR7 98 aa14.55□□□□□ -0.08
CHKB-210ENST00000484266 FCGBPQ9Y6R7 5405 aaPredicted RBP14.49□□□□□ -0.09
CHKB-210ENST00000484266 COA5Q86WW8 74 aa14.43□□□□□ -0.1
CHKB-210ENST00000484266 CCDC179H3BU77 68 aa14.4□□□□□ -0.1
CHKB-210ENST00000484266 R4GN34 69 aa14.37□□□□□ -0.11
CHKB-210ENST00000484266 M0QZ58 72 aa14.29□□□□□ -0.12
CHKB-210ENST00000484266 KRTAP9-1A8MXZ3 250 aaPredicted RBP14.25□□□□□ -0.13
CHKB-210ENST00000484266 A6NN06 94 aa14.15□□□□□ -0.14
CHKB-210ENST00000484266 KRTAP10-5P60370 271 aa14.11□□□□□ -0.15
CHKB-210ENST00000484266 LINC01554Q52M75 96 aa14.05□□□□□ -0.16
CHKB-210ENST00000484266 ATP5EP56381 51 aaPredicted RBP14.01□□□□□ -0.17
CHKB-210ENST00000484266 PLAC4Q8WY50 150 aa14.01□□□□□ -0.17
CHKB-210ENST00000484266 SEC61GP60059 68 aa13.91□□□□□ -0.18
CHKB-210ENST00000484266 MACF1Q9UPN3 7388 aaKnown RBP13.91□□□□□ -0.18
CHKB-210ENST00000484266 KRTAP9-7A8MTY7 169 aa13.89□□□□□ -0.19
CHKB-210ENST00000484266 SERP1Q9Y6X1 66 aa13.88□□□□□ -0.19
CHKB-210ENST00000484266 TMEM258P61165 79 aa13.86□□□□□ -0.19
CHKB-210ENST00000484266 KRTAP13-4Q3LI77 160 aa13.86□□□□□ -0.19
CHKB-210ENST00000484266 MT1XP80297 61 aa13.81□□□□□ -0.2
CHKB-210ENST00000484266 PRO2289Q9P1D8 64 aa13.77□□□□□ -0.21
CHKB-210ENST00000484266 A0A1B0GU69 56 aa13.66□□□□□ -0.22
CHKB-210ENST00000484266 A0A1B0GU33 70 aa13.65□□□□□ -0.22
CHKB-210ENST00000484266 SYNE2Q8WXH0 6885 aaKnown RBP13.62□□□□□ -0.23
CHKB-210ENST00000484266 SPATA8Q6RVD6 105 aa13.56□□□□□ -0.24
CHKB-210ENST00000484266 KRTAP6-3Q3LI67 103 aa13.5□□□□□ -0.25
CHKB-210ENST00000484266 A0A0D9SG42 100 aa13.46□□□□□ -0.26
CHKB-210ENST00000484266 LINC01558Q9Y6Z2 57 aa13.45□□□□□ -0.26
CHKB-210ENST00000484266 PRR15LQ9BU68 103 aa13.39□□□□□ -0.27
CHKB-210ENST00000484266 KRTAP12-2P59991 146 aa13.35□□□□□ -0.27
CHKB-210ENST00000484266 CAMK2N1Q7Z7J9 78 aa13.29□□□□□ -0.28
CHKB-210ENST00000484266 SMIM26A0A096LP01 95 aa13.24□□□□□ -0.29
CHKB-210ENST00000484266 KRTAP12-1P59990 96 aa13.23□□□□□ -0.29
CHKB-210ENST00000484266 SPINT4Q6UDR6 99 aa13.22□□□□□ -0.29
CHKB-210ENST00000484266 KRTAP10-7P60409 375 aaPredicted RBP13.2□□□□□ -0.3
CHKB-210ENST00000484266 A8MU10 97 aa13.19□□□□□ -0.3
CHKB-210ENST00000484266 KRTAP5-9P26371 169 aa13.15□□□□□ -0.3
CHKB-210ENST00000484266 KMT2DO14686 5537 aa13.14□□□□□ -0.31
CHKB-210ENST00000484266 KRTAP10-12P60413 245 aa13.12□□□□□ -0.31
CHKB-210ENST00000484266 KRTAP4-8A0A0G2JLE6 195 aa13.04□□□□□ -0.32
CHKB-210ENST00000484266 KRTAP4-8Q9BYQ9 185 aa13.04□□□□□ -0.32
CHKB-210ENST00000484266 KRTAP8-1Q8IUC2 63 aa13.02□□□□□ -0.33
CHKB-210ENST00000484266 UQCR11O14957 56 aa12.98□□□□□ -0.33
CHKB-210ENST00000484266 V9GYY9 64 aa12.97□□□□□ -0.33
CHKB-210ENST00000484266 RPS28P62857 69 aaKnown RBP12.96□□□□□ -0.34
CHKB-210ENST00000484266 Q1T7F1 81 aa12.95□□□□□ -0.34
CHKB-210ENST00000484266 MUC12Q9UKN1 5478 aa12.89□□□□□ -0.35
CHKB-210ENST00000484266 SPRR2FQ96RM1 72 aa12.88□□□□□ -0.35
CHKB-210ENST00000484266 PSPHP1O15172 72 aa12.85□□□□□ -0.35
CHKB-210ENST00000484266 MIR22HGQ0VDD5 57 aa12.75□□□□□ -0.37
CHKB-210ENST00000484266 NEBP20929 6669 aa12.73□□□□□ -0.37
CHKB-210ENST00000484266 MDN1Q9NU22 5596 aa12.63□□□□□ -0.39
CHKB-210ENST00000484266 C10orf95Q9H7T3 257 aa12.61□□□□□ -0.39
CHKB-210ENST00000484266 SPRR2EP22531 72 aa12.55□□□□□ -0.4
CHKB-210ENST00000484266 SPRR2BP35325 72 aa12.55□□□□□ -0.4
CHKB-210ENST00000484266 SPRR2AP35326 72 aa12.55□□□□□ -0.4
CHKB-210ENST00000484266 LCE1AQ5T7P2 110 aa12.49□□□□□ -0.41
CHKB-210ENST00000484266 SVIPQ8NHG7 77 aa12.45□□□□□ -0.42
CHKB-210ENST00000484266 A6NED7 52 aa12.43□□□□□ -0.42
CHKB-210ENST00000484266 TNP1P09430 55 aa12.42□□□□□ -0.42
CHKB-210ENST00000484266 K7ERS5 55 aa12.36□□□□□ -0.43
CHKB-210ENST00000484266 KRTAP19-7Q3SYF9 63 aa12.35□□□□□ -0.43
CHKB-210ENST00000484266 KRTAP20-1Q3LI63 56 aa12.22□□□□□ -0.45
CHKB-210ENST00000484266 MT1EP04732 61 aa12.2□□□□□ -0.46
CHKB-210ENST00000484266 LCE3AQ5TA76 89 aa12.19□□□□□ -0.46
CHKB-210ENST00000484266 KRTAP19-5Q3LI72 72 aa12.18□□□□□ -0.46
CHKB-210ENST00000484266 SPRR2DP22532 72 aa12.12□□□□□ -0.47
CHKB-210ENST00000484266 KRTAP2-3P0C7H8 128 aa12.05□□□□□ -0.48
CHKB-210ENST00000484266 KRTAP2-4Q9BYR9 128 aa12.05□□□□□ -0.48
CHKB-210ENST00000484266 KRTAP25-1Q3LHN0 102 aa12.01□□□□□ -0.49
CHKB-210ENST00000484266 CDC42SE1Q9NRR8 79 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms