RNA–Protein interactions for RNA: ENST00000484213.1

ABCD3-205, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best)

Gene ABCD3, Length 4,367 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-205ENST00000484213 VPS13BQ7Z7G8 4022 aa2.4□□□□□ -2.03
ABCD3-205ENST00000484213 KRTAP9-2Q9BYQ4 174 aa2.4□□□□□ -2.03
ABCD3-205ENST00000484213 KRTAP13-1Q8IUC0 172 aa2.4□□□□□ -2.03
ABCD3-205ENST00000484213 LRP1BQ9NZR2 4599 aa2.39□□□□□ -2.03
ABCD3-205ENST00000484213 PKHD1P08F94 4074 aa2.39□□□□□ -2.03
ABCD3-205ENST00000484213 IGLV5-48A0A075B6I7 105 aa2.39□□□□□ -2.03
ABCD3-205ENST00000484213 TRBV7-4A0A0J9YYF1 115 aa2.39□□□□□ -2.03
ABCD3-205ENST00000484213 SPINK7P58062 85 aa2.39□□□□□ -2.03
ABCD3-205ENST00000484213 KIAA1109Q2LD37 5005 aa2.39□□□□□ -2.03
ABCD3-205ENST00000484213 DNAH11Q96DT5 4516 aa2.39□□□□□ -2.03
ABCD3-205ENST00000484213 KRTAP1-4P0C5Y4 121 aa2.38□□□□□ -2.03
ABCD3-205ENST00000484213 KRTAP10-4P60372 401 aaPredicted RBP2.38□□□□□ -2.03
ABCD3-205ENST00000484213 LINC01558Q9Y6Z2 57 aa2.38□□□□□ -2.03
ABCD3-205ENST00000484213 UBR4Q5T4S7 5183 aa2.38□□□□□ -2.03
ABCD3-205ENST00000484213 HYDINQ4G0P3 5121 aa2.38□□□□□ -2.03
ABCD3-205ENST00000484213 A0A0G2JQZ4 141 aa2.38□□□□□ -2.03
ABCD3-205ENST00000484213 Q96NJ1 140 aa2.37□□□□□ -2.03
ABCD3-205ENST00000484213 A0A1W2PNM2 257 aa2.37□□□□□ -2.03
ABCD3-205ENST00000484213 A8MUU9 505 aa2.36□□□□□ -2.03
ABCD3-205ENST00000484213 KRTAP13-3Q3SY46 172 aa2.36□□□□□ -2.03
ABCD3-205ENST00000484213 KRTAP4-5Q9BYR2 181 aa2.36□□□□□ -2.03
ABCD3-205ENST00000484213 TP53AIP1Q9HCN2 124 aa2.36□□□□□ -2.03
ABCD3-205ENST00000484213 A6NN06 94 aa2.36□□□□□ -2.03
ABCD3-205ENST00000484213 DYNC1H1Q14204 4646 aaKnown RBP2.36□□□□□ -2.03
ABCD3-205ENST00000484213 A0A087WSZ3 146 aa2.34□□□□□ -2.03
ABCD3-205ENST00000484213 FAT3Q8TDW7 4589 aa2.34□□□□□ -2.04
ABCD3-205ENST00000484213 MYCBP2O75592 4640 aa2.33□□□□□ -2.04
ABCD3-205ENST00000484213 KRTAP9-7A8MTY7 169 aa2.33□□□□□ -2.04
ABCD3-205ENST00000484213 KRTAP13-2Q52LG2 175 aa2.33□□□□□ -2.04
ABCD3-205ENST00000484213 C9orf92A6NGG3 77 aa2.31□□□□□ -2.04
ABCD3-205ENST00000484213 KRTAP4-16G5E9R7 235 aaPredicted RBP2.31□□□□□ -2.04
ABCD3-205ENST00000484213 SPANXA2-OT1Q8N9U9 137 aa2.31□□□□□ -2.04
ABCD3-205ENST00000484213 A0A0D9SG42 100 aa2.3□□□□□ -2.04
ABCD3-205ENST00000484213 ZCCHC13Q8WW36 166 aaKnown RBP2.29□□□□□ -2.04
ABCD3-205ENST00000484213 DNAH5Q8TE73 4624 aa2.28□□□□□ -2.04
ABCD3-205ENST00000484213 LOC110117498A0A087WWA1 95 aa2.28□□□□□ -2.04
ABCD3-205ENST00000484213 PP632Q6XCG6 107 aa2.28□□□□□ -2.04
ABCD3-205ENST00000484213 TNXBP22105 4242 aa2.28□□□□□ -2.04
ABCD3-205ENST00000484213 KRTAP19-1Q8IUB9 90 aa2.28□□□□□ -2.05
ABCD3-205ENST00000484213 MRPL34Q9BQ48 92 aaKnown RBP2.27□□□□□ -2.05
ABCD3-205ENST00000484213 LCE1DQ5T752 114 aa2.26□□□□□ -2.05
ABCD3-205ENST00000484213 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
ABCD3-205ENST00000484213 APOBP04114 4563 aaKnown RBP2.25□□□□□ -2.05
ABCD3-205ENST00000484213 PLAC4Q8WY50 150 aa2.25□□□□□ -2.05
ABCD3-205ENST00000484213 H1FX-AS1Q4G0G2 97 aa2.24□□□□□ -2.05
ABCD3-205ENST00000484213 HSPG2P98160 4391 aa2.24□□□□□ -2.05
ABCD3-205ENST00000484213 A0A1B0GU33 70 aa2.24□□□□□ -2.05
ABCD3-205ENST00000484213 KRTAP4-8Q9BYQ9 185 aa2.24□□□□□ -2.05
ABCD3-205ENST00000484213 CRCT1Q9UGL9 99 aa2.24□□□□□ -2.05
ABCD3-205ENST00000484213 PRO2289Q9P1D8 64 aa2.23□□□□□ -2.05
ABCD3-205ENST00000484213 ABCA13Q86UQ4 5058 aa2.23□□□□□ -2.05
ABCD3-205ENST00000484213 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
ABCD3-205ENST00000484213 KRTAP12-2P59991 146 aa2.22□□□□□ -2.05
ABCD3-205ENST00000484213 P0C880 135 aa2.21□□□□□ -2.06
ABCD3-205ENST00000484213 LCE5AQ5TCM9 118 aa2.21□□□□□ -2.06
ABCD3-205ENST00000484213 KRTAP9-4Q9BYQ2 154 aa2.21□□□□□ -2.06
ABCD3-205ENST00000484213 SRRM2Q9UQ35 2752 aaKnown RBP2.21□□□□□ -2.06
ABCD3-205ENST00000484213 FAT1Q14517 4588 aa2.2□□□□□ -2.06
ABCD3-205ENST00000484213 SPATA8Q6RVD6 105 aa2.19□□□□□ -2.06
ABCD3-205ENST00000484213 S4R3F8 94 aa2.19□□□□□ -2.06
ABCD3-205ENST00000484213 Q8NDZ9 215 aa2.19□□□□□ -2.06
ABCD3-205ENST00000484213 KRTAP10-10P60014 251 aa2.18□□□□□ -2.06
ABCD3-205ENST00000484213 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.18□□□□□ -2.06
ABCD3-205ENST00000484213 LINC00472Q9H8W2 130 aa2.17□□□□□ -2.06
ABCD3-205ENST00000484213 HERC1Q15751 4861 aa2.16□□□□□ -2.06
ABCD3-205ENST00000484213 KRTAP4-12Q9BQ66 201 aa2.14□□□□□ -2.07
ABCD3-205ENST00000484213 KRTAP9-3Q9BYQ3 159 aa2.11□□□□□ -2.07
ABCD3-205ENST00000484213 KRTAP10-6P60371 365 aaPredicted RBP2.11□□□□□ -2.07
ABCD3-205ENST00000484213 KRTAP9-8Q9BYQ0 159 aa2.11□□□□□ -2.07
ABCD3-205ENST00000484213 KRTAP5-3Q6L8H2 238 aa2.1□□□□□ -2.07
ABCD3-205ENST00000484213 C10orf95Q9H7T3 257 aa2.09□□□□□ -2.07
ABCD3-205ENST00000484213 FLGP20930 4061 aaPredicted RBP2.09□□□□□ -2.08
ABCD3-205ENST00000484213 H0YAA0 97 aa2.08□□□□□ -2.08
ABCD3-205ENST00000484213 KRTAP10-7P60409 375 aaPredicted RBP2.08□□□□□ -2.08
ABCD3-205ENST00000484213 KRTAP4-8A0A0G2JLE6 195 aa2.08□□□□□ -2.08
ABCD3-205ENST00000484213 MMP24-AS1A0A0U1RRL7 71 aa2.08□□□□□ -2.08
ABCD3-205ENST00000484213 KRTAP9-9Q9BYP9 154 aa2.08□□□□□ -2.08
ABCD3-205ENST00000484213 MT1HP80294 61 aa2.07□□□□□ -2.08
ABCD3-205ENST00000484213 LCE3CQ5T5A8 94 aa2.06□□□□□ -2.08
ABCD3-205ENST00000484213 M0QZ58 72 aa2.05□□□□□ -2.08
ABCD3-205ENST00000484213 MUC17Q685J3 4493 aa2.05□□□□□ -2.08
ABCD3-205ENST00000484213 MUC2Q02817 5179 aa2.03□□□□□ -2.08
ABCD3-205ENST00000484213 RNF213Q63HN8 5207 aa2.03□□□□□ -2.08
ABCD3-205ENST00000484213 LRP1Q07954 4544 aaKnown RBP2.02□□□□□ -2.09
ABCD3-205ENST00000484213 FAT4Q6V0I7 4981 aa2.01□□□□□ -2.09
ABCD3-205ENST00000484213 HMCN2Q8NDA2 5059 aa2.01□□□□□ -2.09
ABCD3-205ENST00000484213 KRTAP12-1P59990 96 aa2□□□□□ -2.09
ABCD3-205ENST00000484213 KRTAP6-3Q3LI67 103 aa1.98□□□□□ -2.09
ABCD3-205ENST00000484213 KRTAP4-11Q9BYQ6 195 aa1.98□□□□□ -2.09
ABCD3-205ENST00000484213 KRTAP4-9Q9BYQ8 210 aa1.96□□□□□ -2.1
ABCD3-205ENST00000484213 KRTAP4-7Q9BYR0 210 aa1.96□□□□□ -2.1
ABCD3-205ENST00000484213 KRTAP20-1Q3LI63 56 aa1.96□□□□□ -2.1
ABCD3-205ENST00000484213 KRTAP19-6Q3LI70 58 aa1.95□□□□□ -2.1
ABCD3-205ENST00000484213 INE1O15225 51 aa1.94□□□□□ -2.1
ABCD3-205ENST00000484213 MT2AP02795 61 aa1.94□□□□□ -2.1
ABCD3-205ENST00000484213 KRTAP12-3P60328 96 aa1.93□□□□□ -2.1
ABCD3-205ENST00000484213 KRTAP13-4Q3LI77 160 aa1.92□□□□□ -2.1
ABCD3-205ENST00000484213 KRTAP4-2Q9BYR5 136 aa1.92□□□□□ -2.1
ABCD3-205ENST00000484213 HMCN1Q96RW7 5635 aa1.91□□□□□ -2.1
ABCD3-205ENST00000484213 KRTAP4-1Q9BYQ7 146 aa1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms