RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 CRCT1Q9UGL9 99 aa5.18□□□□□ -1.58
UFD1-208ENST00000484101 LINC01558Q9Y6Z2 57 aa5.18□□□□□ -1.58
UFD1-208ENST00000484101 RPL37P61927 97 aaKnown RBP5.17□□□□□ -1.58
UFD1-208ENST00000484101 SPTSSBQ8NFR3 76 aa5.16□□□□□ -1.58
UFD1-208ENST00000484101 LCE2AQ5TA79 106 aaPredicted RBP5.15□□□□□ -1.59
UFD1-208ENST00000484101 SPINK7P58062 85 aa5.14□□□□□ -1.59
UFD1-208ENST00000484101 TPRXLQ17RH7 258 aa5.14□□□□□ -1.59
UFD1-208ENST00000484101 XP32Q5T750 250 aa5.13□□□□□ -1.59
UFD1-208ENST00000484101 PRR15LQ9BU68 103 aa5.13□□□□□ -1.59
UFD1-208ENST00000484101 FSIP2Q5CZC0 6907 aa5.11□□□□□ -1.59
UFD1-208ENST00000484101 PSPHP1O15172 72 aa5.11□□□□□ -1.59
UFD1-208ENST00000484101 Q5VV11 94 aa5.1□□□□□ -1.59
UFD1-208ENST00000484101 PRO0628Q9UI54 55 aa5.1□□□□□ -1.59
UFD1-208ENST00000484101 COX6B2Q6YFQ2 88 aa5.08□□□□□ -1.6
UFD1-208ENST00000484101 BRK1Q8WUW1 75 aa5.06□□□□□ -1.6
UFD1-208ENST00000484101 LORP23490 312 aaPredicted RBP5.05□□□□□ -1.6
UFD1-208ENST00000484101 LPAP08519 4548 aa5.05□□□□□ -1.6
UFD1-208ENST00000484101 A0A1B0GU69 56 aa5.04□□□□□ -1.6
UFD1-208ENST00000484101 A6NED7 52 aa5.02□□□□□ -1.61
UFD1-208ENST00000484101 SEC61GP60059 68 aa5.02□□□□□ -1.61
UFD1-208ENST00000484101 KRTAP3-1Q9BYR8 98 aa4.99□□□□□ -1.61
UFD1-208ENST00000484101 CDC42SE1Q9NRR8 79 aa4.99□□□□□ -1.61
UFD1-208ENST00000484101 KRTAP9-7A8MTY7 169 aa4.98□□□□□ -1.61
UFD1-208ENST00000484101 SEC61BP60468 96 aaKnown RBP4.97□□□□□ -1.61
UFD1-208ENST00000484101 RBM12B-AS1Q9P1G2 102 aa4.95□□□□□ -1.62
UFD1-208ENST00000484101 UQCR11O14957 56 aa4.94□□□□□ -1.62
UFD1-208ENST00000484101 H1FX-AS1Q4G0G2 97 aa4.92□□□□□ -1.62
UFD1-208ENST00000484101 S4R3F8 94 aa4.91□□□□□ -1.62
UFD1-208ENST00000484101 SPATA8Q6RVD6 105 aa4.89□□□□□ -1.63
UFD1-208ENST00000484101 LCA10Q71F78 164 aa4.89□□□□□ -1.63
UFD1-208ENST00000484101 MIR22HGQ0VDD5 57 aa4.87□□□□□ -1.63
UFD1-208ENST00000484101 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.86□□□□□ -1.63
UFD1-208ENST00000484101 A0A0A0MQY5 61 aa4.84□□□□□ -1.63
UFD1-208ENST00000484101 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
UFD1-208ENST00000484101 A0A1B0GU33 70 aa4.82□□□□□ -1.64
UFD1-208ENST00000484101 PMAIP1Q13794 54 aa4.8□□□□□ -1.64
UFD1-208ENST00000484101 CSAG1Q6PB30 78 aa4.8□□□□□ -1.64
UFD1-208ENST00000484101 A8MU10 97 aa4.78□□□□□ -1.64
UFD1-208ENST00000484101 H0YAA0 97 aa4.77□□□□□ -1.65
UFD1-208ENST00000484101 A6NN06 94 aa4.76□□□□□ -1.65
UFD1-208ENST00000484101 K7ERS5 55 aa4.72□□□□□ -1.65
UFD1-208ENST00000484101 KRTAP10-6P60371 365 aaPredicted RBP4.71□□□□□ -1.66
UFD1-208ENST00000484101 KTN1-AS1Q86SY8 53 aa4.71□□□□□ -1.66
UFD1-208ENST00000484101 MUC17Q685J3 4493 aa4.7□□□□□ -1.66
UFD1-208ENST00000484101 ADM2Q7Z4H4 148 aa4.67□□□□□ -1.66
UFD1-208ENST00000484101 M0QZ58 72 aa4.66□□□□□ -1.66
UFD1-208ENST00000484101 KRTAP4-1Q9BYQ7 146 aa4.66□□□□□ -1.66
UFD1-208ENST00000484101 P0C880 135 aa4.62□□□□□ -1.67
UFD1-208ENST00000484101 KRTAP19-2Q3LHN2 52 aa4.61□□□□□ -1.67
UFD1-208ENST00000484101 KRTAP13-4Q3LI77 160 aa4.57□□□□□ -1.68
UFD1-208ENST00000484101 SSPOA2VEC9 5147 aa4.56□□□□□ -1.68
UFD1-208ENST00000484101 R4GN34 69 aa4.54□□□□□ -1.68
UFD1-208ENST00000484101 A0A0D9SG42 100 aa4.52□□□□□ -1.69
UFD1-208ENST00000484101 CRIPTQ9P021 101 aa4.52□□□□□ -1.69
UFD1-208ENST00000484101 FCGBPQ9Y6R7 5405 aaPredicted RBP4.5□□□□□ -1.69
UFD1-208ENST00000484101 USH2AO75445 5202 aa4.49□□□□□ -1.69
UFD1-208ENST00000484101 SYNE2Q8WXH0 6885 aaKnown RBP4.49□□□□□ -1.69
UFD1-208ENST00000484101 ROMO1P60602 79 aa4.47□□□□□ -1.69
UFD1-208ENST00000484101 KRTAP12-1P59990 96 aa4.46□□□□□ -1.7
UFD1-208ENST00000484101 FLGP20930 4061 aaPredicted RBP4.46□□□□□ -1.7
UFD1-208ENST00000484101 MT1HP80294 61 aa4.45□□□□□ -1.7
UFD1-208ENST00000484101 SPINT4Q6UDR6 99 aa4.43□□□□□ -1.7
UFD1-208ENST00000484101 KRTAP12-2P59991 146 aa4.42□□□□□ -1.7
UFD1-208ENST00000484101 MACF1Q9UPN3 7388 aaKnown RBP4.42□□□□□ -1.7
UFD1-208ENST00000484101 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
UFD1-208ENST00000484101 LINC01554Q52M75 96 aa4.38□□□□□ -1.71
UFD1-208ENST00000484101 M0R2T5 61 aa4.37□□□□□ -1.71
UFD1-208ENST00000484101 KRTAP25-1Q3LHN0 102 aa4.35□□□□□ -1.71
UFD1-208ENST00000484101 KRTAP19-1Q8IUB9 90 aa4.34□□□□□ -1.71
UFD1-208ENST00000484101 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
UFD1-208ENST00000484101 KRTAP6-3Q3LI67 103 aa4.32□□□□□ -1.72
UFD1-208ENST00000484101 KRTAP20-1Q3LI63 56 aa4.3□□□□□ -1.72
UFD1-208ENST00000484101 SPRR2GQ9BYE4 73 aa4.29□□□□□ -1.72
UFD1-208ENST00000484101 NEBP20929 6669 aa4.27□□□□□ -1.73
UFD1-208ENST00000484101 CAMK2N1Q7Z7J9 78 aa4.27□□□□□ -1.73
UFD1-208ENST00000484101 MT2AP02795 61 aa4.23□□□□□ -1.73
UFD1-208ENST00000484101 KRTAP10-10P60014 251 aa4.22□□□□□ -1.73
UFD1-208ENST00000484101 PLAC4Q8WY50 150 aa4.21□□□□□ -1.74
UFD1-208ENST00000484101 KRTAP9-8Q9BYQ0 159 aa4.21□□□□□ -1.74
UFD1-208ENST00000484101 MT1FP04733 61 aa4.19□□□□□ -1.74
UFD1-208ENST00000484101 C10orf95Q9H7T3 257 aa4.18□□□□□ -1.74
UFD1-208ENST00000484101 PP632Q6XCG6 107 aa4.17□□□□□ -1.74
UFD1-208ENST00000484101 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
UFD1-208ENST00000484101 MUC12Q9UKN1 5478 aa4.15□□□□□ -1.74
UFD1-208ENST00000484101 TNP1P09430 55 aa4.12□□□□□ -1.75
UFD1-208ENST00000484101 KRTAP19-6Q3LI70 58 aa4.09□□□□□ -1.75
UFD1-208ENST00000484101 KRTAP9-3Q9BYQ3 159 aa4.06□□□□□ -1.76
UFD1-208ENST00000484101 MT1BP07438 61 aa4.02□□□□□ -1.77
UFD1-208ENST00000484101 KRTAP2-3P0C7H8 128 aa4.01□□□□□ -1.77
UFD1-208ENST00000484101 KRTAP2-4Q9BYR9 128 aa4.01□□□□□ -1.77
UFD1-208ENST00000484101 PRO2289Q9P1D8 64 aa4.01□□□□□ -1.77
UFD1-208ENST00000484101 KMT2DO14686 5537 aa4□□□□□ -1.77
UFD1-208ENST00000484101 KRTAP15-1Q3LI76 137 aa3.94□□□□□ -1.78
UFD1-208ENST00000484101 MDN1Q9NU22 5596 aa3.93□□□□□ -1.78
UFD1-208ENST00000484101 KRTAP10-5P60370 271 aa3.93□□□□□ -1.78
UFD1-208ENST00000484101 MT1XP80297 61 aa3.93□□□□□ -1.78
UFD1-208ENST00000484101 GPR98Q8WXG9 6306 aa3.92□□□□□ -1.78
UFD1-208ENST00000484101 KRTAP5-9P26371 169 aa3.86□□□□□ -1.79
UFD1-208ENST00000484101 KRTAP10-12P60413 245 aa3.85□□□□□ -1.79
UFD1-208ENST00000484101 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms