RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 ATOX1O00244 68 aa4.78□□□□□ -1.64
SHROOM4-204ENST00000483955 TRAV22A0A0B4J277 110 aa4.77□□□□□ -1.65
SHROOM4-204ENST00000483955 LRP2P98164 4655 aa4.76□□□□□ -1.65
SHROOM4-204ENST00000483955 KRTAP3-1Q9BYR8 98 aa4.75□□□□□ -1.65
SHROOM4-204ENST00000483955 TRAV7A0A075B6U4 112 aa4.74□□□□□ -1.65
SHROOM4-204ENST00000483955 H0Y9P7 68 aa4.73□□□□□ -1.65
SHROOM4-204ENST00000483955 Q5W150 140 aa4.73□□□□□ -1.65
SHROOM4-204ENST00000483955 C7orf65Q6ZTY9 151 aa4.73□□□□□ -1.65
SHROOM4-204ENST00000483955 LOC101927531A0A1B0GV80 90 aa4.71□□□□□ -1.66
SHROOM4-204ENST00000483955 H3BPC8 53 aa4.71□□□□□ -1.66
SHROOM4-204ENST00000483955 IGKV2D-30A0A075B6S6 120 aa4.7□□□□□ -1.66
SHROOM4-204ENST00000483955 IGKV2-30P06310 120 aa4.7□□□□□ -1.66
SHROOM4-204ENST00000483955 SPINK7P58062 85 aa4.7□□□□□ -1.66
SHROOM4-204ENST00000483955 SERP2Q8N6R1 65 aa4.69□□□□□ -1.66
SHROOM4-204ENST00000483955 C1orf64Q8NEQ6 169 aa4.67□□□□□ -1.66
SHROOM4-204ENST00000483955 LINC00208Q96KT6 92 aa4.67□□□□□ -1.66
SHROOM4-204ENST00000483955 KRTAP4-1Q9BYQ7 146 aa4.67□□□□□ -1.66
SHROOM4-204ENST00000483955 COX7CP15954 63 aa4.65□□□□□ -1.67
SHROOM4-204ENST00000483955 CYP4F30PQ9H0H9 118 aa4.65□□□□□ -1.67
SHROOM4-204ENST00000483955 A8MUN3 132 aa4.64□□□□□ -1.67
SHROOM4-204ENST00000483955 HRES1P13985 223 aa4.64□□□□□ -1.67
SHROOM4-204ENST00000483955 CAMK2N1Q7Z7J9 78 aa4.64□□□□□ -1.67
SHROOM4-204ENST00000483955 C20orf197Q8N268 126 aa4.61□□□□□ -1.67
SHROOM4-204ENST00000483955 KTN1-AS1Q86SY8 53 aa4.6□□□□□ -1.67
SHROOM4-204ENST00000483955 KLKP1Q107X0 134 aa4.59□□□□□ -1.67
SHROOM4-204ENST00000483955 SNURFQ9Y675 71 aa4.59□□□□□ -1.67
SHROOM4-204ENST00000483955 UBR4Q5T4S7 5183 aa4.59□□□□□ -1.68
SHROOM4-204ENST00000483955 COX6B2Q6YFQ2 88 aa4.58□□□□□ -1.68
SHROOM4-204ENST00000483955 NDUFC1O43677 76 aa4.56□□□□□ -1.68
SHROOM4-204ENST00000483955 LCA10Q71F78 164 aa4.56□□□□□ -1.68
SHROOM4-204ENST00000483955 RNF213Q63HN8 5207 aa4.54□□□□□ -1.68
SHROOM4-204ENST00000483955 KRTAP19-2Q3LHN2 52 aa4.54□□□□□ -1.68
SHROOM4-204ENST00000483955 MUC2Q02817 5179 aa4.52□□□□□ -1.69
SHROOM4-204ENST00000483955 CCDC179H3BU77 68 aa4.51□□□□□ -1.69
SHROOM4-204ENST00000483955 H1FX-AS1Q4G0G2 97 aa4.51□□□□□ -1.69
SHROOM4-204ENST00000483955 SPANXA2-OT1Q8N9U9 137 aa4.51□□□□□ -1.69
SHROOM4-204ENST00000483955 H7BZZ5 65 aa4.49□□□□□ -1.69
SHROOM4-204ENST00000483955 DMAC1Q96GE9 116 aa4.49□□□□□ -1.69
SHROOM4-204ENST00000483955 K7ERS5 55 aa4.47□□□□□ -1.69
SHROOM4-204ENST00000483955 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
SHROOM4-204ENST00000483955 CYSTM1Q9H1C7 97 aa4.47□□□□□ -1.69
SHROOM4-204ENST00000483955 BRK1Q8WUW1 75 aa4.46□□□□□ -1.7
SHROOM4-204ENST00000483955 ACYP2P14621 99 aa4.45□□□□□ -1.7
SHROOM4-204ENST00000483955 S4R3F8 94 aa4.45□□□□□ -1.7
SHROOM4-204ENST00000483955 ATP5EP56381 51 aaPredicted RBP4.44□□□□□ -1.7
SHROOM4-204ENST00000483955 MT1HP80294 61 aa4.44□□□□□ -1.7
SHROOM4-204ENST00000483955 LINC01554Q52M75 96 aa4.43□□□□□ -1.7
SHROOM4-204ENST00000483955 M0R2T5 61 aa4.42□□□□□ -1.7
SHROOM4-204ENST00000483955 TMEM258P61165 79 aa4.42□□□□□ -1.7
SHROOM4-204ENST00000483955 FLGP20930 4061 aaPredicted RBP4.41□□□□□ -1.7
SHROOM4-204ENST00000483955 FAT4Q6V0I7 4981 aa4.39□□□□□ -1.71
SHROOM4-204ENST00000483955 CHKB-CPT1BH3BT56 60 aa4.38□□□□□ -1.71
SHROOM4-204ENST00000483955 CSAG1Q6PB30 78 aa4.37□□□□□ -1.71
SHROOM4-204ENST00000483955 SPTSSBQ8NFR3 76 aa4.36□□□□□ -1.71
SHROOM4-204ENST00000483955 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
SHROOM4-204ENST00000483955 COA5Q86WW8 74 aa4.35□□□□□ -1.71
SHROOM4-204ENST00000483955 A6NED7 52 aa4.34□□□□□ -1.71
SHROOM4-204ENST00000483955 KRTAP10-6P60371 365 aaPredicted RBP4.31□□□□□ -1.72
SHROOM4-204ENST00000483955 ADM2Q7Z4H4 148 aa4.29□□□□□ -1.72
SHROOM4-204ENST00000483955 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
SHROOM4-204ENST00000483955 H0YAA0 97 aa4.27□□□□□ -1.73
SHROOM4-204ENST00000483955 SERP1Q9Y6X1 66 aa4.26□□□□□ -1.73
SHROOM4-204ENST00000483955 MT2AP02795 61 aa4.21□□□□□ -1.74
SHROOM4-204ENST00000483955 KRTAP10-10P60014 251 aa4.2□□□□□ -1.74
SHROOM4-204ENST00000483955 MT1FP04733 61 aa4.18□□□□□ -1.74
SHROOM4-204ENST00000483955 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
SHROOM4-204ENST00000483955 CRIPTQ9P021 101 aa4.16□□□□□ -1.74
SHROOM4-204ENST00000483955 A0A1B0GU69 56 aa4.14□□□□□ -1.75
SHROOM4-204ENST00000483955 P0C880 135 aa4.13□□□□□ -1.75
SHROOM4-204ENST00000483955 PRR15LQ9BU68 103 aa4.13□□□□□ -1.75
SHROOM4-204ENST00000483955 LINC01558Q9Y6Z2 57 aa4.13□□□□□ -1.75
SHROOM4-204ENST00000483955 R4GN34 69 aa4.1□□□□□ -1.75
SHROOM4-204ENST00000483955 A6NN06 94 aa4.08□□□□□ -1.76
SHROOM4-204ENST00000483955 Q1T7F1 81 aa4.08□□□□□ -1.76
SHROOM4-204ENST00000483955 M0QZ58 72 aa4.07□□□□□ -1.76
SHROOM4-204ENST00000483955 SPRR2GQ9BYE4 73 aa4.07□□□□□ -1.76
SHROOM4-204ENST00000483955 A0A1B0GU33 70 aa4.05□□□□□ -1.76
SHROOM4-204ENST00000483955 ROMO1P60602 79 aa4.03□□□□□ -1.76
SHROOM4-204ENST00000483955 Q5VV11 94 aa4.02□□□□□ -1.77
SHROOM4-204ENST00000483955 UQCR11O14957 56 aa3.99□□□□□ -1.77
SHROOM4-204ENST00000483955 KRTAP19-8Q3LI54 63 aa3.98□□□□□ -1.77
SHROOM4-204ENST00000483955 KRTAP13-4Q3LI77 160 aa3.98□□□□□ -1.77
SHROOM4-204ENST00000483955 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
SHROOM4-204ENST00000483955 SPATA8Q6RVD6 105 aa3.96□□□□□ -1.78
SHROOM4-204ENST00000483955 KRTAP25-1Q3LHN0 102 aa3.94□□□□□ -1.78
SHROOM4-204ENST00000483955 MT1BP07438 61 aa3.92□□□□□ -1.78
SHROOM4-204ENST00000483955 PLAC4Q8WY50 150 aa3.92□□□□□ -1.78
SHROOM4-204ENST00000483955 A0A0D9SG42 100 aa3.91□□□□□ -1.78
SHROOM4-204ENST00000483955 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
SHROOM4-204ENST00000483955 MIR22HGQ0VDD5 57 aa3.91□□□□□ -1.78
SHROOM4-204ENST00000483955 SPINT4Q6UDR6 99 aa3.91□□□□□ -1.78
SHROOM4-204ENST00000483955 A8MU10 97 aa3.87□□□□□ -1.79
SHROOM4-204ENST00000483955 KRTAP12-1P59990 96 aa3.84□□□□□ -1.79
SHROOM4-204ENST00000483955 KRTAP19-6Q3LI70 58 aa3.83□□□□□ -1.8
SHROOM4-204ENST00000483955 CRCT1Q9UGL9 99 aa3.83□□□□□ -1.8
SHROOM4-204ENST00000483955 USH2AO75445 5202 aa3.83□□□□□ -1.8
SHROOM4-204ENST00000483955 CDC42SE1Q9NRR8 79 aa3.82□□□□□ -1.8
SHROOM4-204ENST00000483955 PRO2289Q9P1D8 64 aa3.82□□□□□ -1.8
SHROOM4-204ENST00000483955 KRTAP12-2P59991 146 aa3.81□□□□□ -1.8
SHROOM4-204ENST00000483955 KRTAP10-5P60370 271 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms