RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 ATOX1O00244 68 aa4.63□□□□□ -1.67
HMG20B-210ENST00000483417 MP68P56378 58 aa4.63□□□□□ -1.67
HMG20B-210ENST00000483417 TRAV7A0A075B6U4 112 aa4.62□□□□□ -1.67
HMG20B-210ENST00000483417 SMIM20Q8N5G0 67 aa4.61□□□□□ -1.67
HMG20B-210ENST00000483417 KRTAP10-10P60014 251 aa4.6□□□□□ -1.67
HMG20B-210ENST00000483417 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.59□□□□□ -1.67
HMG20B-210ENST00000483417 FCGBPQ9Y6R7 5405 aaPredicted RBP4.58□□□□□ -1.68
HMG20B-210ENST00000483417 H3BPC8 53 aa4.57□□□□□ -1.68
HMG20B-210ENST00000483417 LCA10Q71F78 164 aa4.56□□□□□ -1.68
HMG20B-210ENST00000483417 KRTAP19-1Q8IUB9 90 aa4.56□□□□□ -1.68
HMG20B-210ENST00000483417 SNURFQ9Y675 71 aa4.56□□□□□ -1.68
HMG20B-210ENST00000483417 CCDC179H3BU77 68 aa4.55□□□□□ -1.68
HMG20B-210ENST00000483417 SERP2Q8N6R1 65 aa4.55□□□□□ -1.68
HMG20B-210ENST00000483417 KRTAP9-7A8MTY7 169 aa4.53□□□□□ -1.68
HMG20B-210ENST00000483417 RPS28P62857 69 aaKnown RBP4.53□□□□□ -1.68
HMG20B-210ENST00000483417 S4R3F8 94 aa4.53□□□□□ -1.68
HMG20B-210ENST00000483417 C20orf197Q8N268 126 aa4.52□□□□□ -1.69
HMG20B-210ENST00000483417 KRTAP19-6Q3LI70 58 aa4.49□□□□□ -1.69
HMG20B-210ENST00000483417 COX7CP15954 63 aa4.48□□□□□ -1.69
HMG20B-210ENST00000483417 CYSTM1Q9H1C7 97 aa4.48□□□□□ -1.69
HMG20B-210ENST00000483417 CSAG1Q6PB30 78 aa4.47□□□□□ -1.69
HMG20B-210ENST00000483417 A8MUN3 132 aa4.46□□□□□ -1.7
HMG20B-210ENST00000483417 DMAC1Q96GE9 116 aa4.46□□□□□ -1.7
HMG20B-210ENST00000483417 MACF1Q9UPN3 7388 aaKnown RBP4.45□□□□□ -1.7
HMG20B-210ENST00000483417 NDUFC1O43677 76 aa4.42□□□□□ -1.7
HMG20B-210ENST00000483417 ACYP2P14621 99 aa4.4□□□□□ -1.71
HMG20B-210ENST00000483417 TMEM258P61165 79 aa4.4□□□□□ -1.71
HMG20B-210ENST00000483417 SYNE2Q8WXH0 6885 aaKnown RBP4.4□□□□□ -1.71
HMG20B-210ENST00000483417 H7BZZ5 65 aa4.38□□□□□ -1.71
HMG20B-210ENST00000483417 SPANXA2-OT1Q8N9U9 137 aa4.38□□□□□ -1.71
HMG20B-210ENST00000483417 ADM2Q7Z4H4 148 aa4.34□□□□□ -1.71
HMG20B-210ENST00000483417 PRO0628Q9UI54 55 aa4.34□□□□□ -1.71
HMG20B-210ENST00000483417 P0C880 135 aa4.31□□□□□ -1.72
HMG20B-210ENST00000483417 H0YAA0 97 aa4.3□□□□□ -1.72
HMG20B-210ENST00000483417 MT1BP07438 61 aa4.29□□□□□ -1.72
HMG20B-210ENST00000483417 KRTAP6-3Q3LI67 103 aa4.29□□□□□ -1.72
HMG20B-210ENST00000483417 V9GYY9 64 aa4.29□□□□□ -1.72
HMG20B-210ENST00000483417 CHKB-CPT1BH3BT56 60 aa4.28□□□□□ -1.72
HMG20B-210ENST00000483417 SEC61GP60059 68 aa4.28□□□□□ -1.72
HMG20B-210ENST00000483417 COA5Q86WW8 74 aa4.28□□□□□ -1.72
HMG20B-210ENST00000483417 SPRR2GQ9BYE4 73 aa4.28□□□□□ -1.72
HMG20B-210ENST00000483417 SERP1Q9Y6X1 66 aa4.28□□□□□ -1.72
HMG20B-210ENST00000483417 KRTAP19-8Q3LI54 63 aa4.27□□□□□ -1.73
HMG20B-210ENST00000483417 SMIM26A0A096LP01 95 aa4.25□□□□□ -1.73
HMG20B-210ENST00000483417 ATP5EP56381 51 aaPredicted RBP4.22□□□□□ -1.73
HMG20B-210ENST00000483417 SPTSSBQ8NFR3 76 aa4.22□□□□□ -1.73
HMG20B-210ENST00000483417 Q5VV11 94 aa4.21□□□□□ -1.74
HMG20B-210ENST00000483417 CRIPTQ9P021 101 aa4.21□□□□□ -1.74
HMG20B-210ENST00000483417 A6NN06 94 aa4.2□□□□□ -1.74
HMG20B-210ENST00000483417 KRTAP10-5P60370 271 aa4.19□□□□□ -1.74
HMG20B-210ENST00000483417 NEBP20929 6669 aa4.16□□□□□ -1.74
HMG20B-210ENST00000483417 M0QZ58 72 aa4.15□□□□□ -1.75
HMG20B-210ENST00000483417 R4GN34 69 aa4.15□□□□□ -1.75
HMG20B-210ENST00000483417 MUC12Q9UKN1 5478 aa4.15□□□□□ -1.75
HMG20B-210ENST00000483417 KRTAP13-4Q3LI77 160 aa4.13□□□□□ -1.75
HMG20B-210ENST00000483417 BRK1Q8WUW1 75 aa4.13□□□□□ -1.75
HMG20B-210ENST00000483417 PMAIP1Q13794 54 aa4.11□□□□□ -1.75
HMG20B-210ENST00000483417 LINC01554Q52M75 96 aa4.11□□□□□ -1.75
HMG20B-210ENST00000483417 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
HMG20B-210ENST00000483417 SPATA8Q6RVD6 105 aa4.05□□□□□ -1.76
HMG20B-210ENST00000483417 A0A1B0GU33 70 aa4.04□□□□□ -1.76
HMG20B-210ENST00000483417 A0A1B0GU69 56 aa4.03□□□□□ -1.76
HMG20B-210ENST00000483417 Q1T7F1 81 aa4.03□□□□□ -1.76
HMG20B-210ENST00000483417 PLAC4Q8WY50 150 aa4.03□□□□□ -1.76
HMG20B-210ENST00000483417 LINC01558Q9Y6Z2 57 aa4.03□□□□□ -1.76
HMG20B-210ENST00000483417 MT1XP80297 61 aa4.02□□□□□ -1.77
HMG20B-210ENST00000483417 KMT2DO14686 5537 aa4.02□□□□□ -1.77
HMG20B-210ENST00000483417 MDN1Q9NU22 5596 aa4□□□□□ -1.77
HMG20B-210ENST00000483417 A0A0D9SG42 100 aa3.99□□□□□ -1.77
HMG20B-210ENST00000483417 A8MU10 97 aa3.96□□□□□ -1.78
HMG20B-210ENST00000483417 KRTAP20-1Q3LI63 56 aa3.95□□□□□ -1.78
HMG20B-210ENST00000483417 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
HMG20B-210ENST00000483417 PRO2289Q9P1D8 64 aa3.94□□□□□ -1.78
HMG20B-210ENST00000483417 KRTAP12-1P59990 96 aa3.92□□□□□ -1.78
HMG20B-210ENST00000483417 KRTAP12-2P59991 146 aa3.92□□□□□ -1.78
HMG20B-210ENST00000483417 PRR15LQ9BU68 103 aa3.92□□□□□ -1.78
HMG20B-210ENST00000483417 PSPHP1O15172 72 aa3.9□□□□□ -1.79
HMG20B-210ENST00000483417 SPINT4Q6UDR6 99 aa3.9□□□□□ -1.79
HMG20B-210ENST00000483417 SPRR2FQ96RM1 72 aa3.89□□□□□ -1.79
HMG20B-210ENST00000483417 KRTAP2-3P0C7H8 128 aa3.87□□□□□ -1.79
HMG20B-210ENST00000483417 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
HMG20B-210ENST00000483417 KRTAP2-4Q9BYR9 128 aa3.87□□□□□ -1.79
HMG20B-210ENST00000483417 KRTAP4-8A0A0G2JLE6 195 aa3.86□□□□□ -1.79
HMG20B-210ENST00000483417 KRTAP8-1Q8IUC2 63 aa3.86□□□□□ -1.79
HMG20B-210ENST00000483417 KRTAP4-8Q9BYQ9 185 aa3.86□□□□□ -1.79
HMG20B-210ENST00000483417 SPRR2EP22531 72 aa3.84□□□□□ -1.79
HMG20B-210ENST00000483417 SPRR2BP35325 72 aa3.84□□□□□ -1.79
HMG20B-210ENST00000483417 SPRR2AP35326 72 aa3.84□□□□□ -1.79
HMG20B-210ENST00000483417 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.79
HMG20B-210ENST00000483417 CAMK2N1Q7Z7J9 78 aa3.84□□□□□ -1.79
HMG20B-210ENST00000483417 UQCR11O14957 56 aa3.83□□□□□ -1.8
HMG20B-210ENST00000483417 CDC42SE1Q9NRR8 79 aa3.81□□□□□ -1.8
HMG20B-210ENST00000483417 KRTAP10-12P60413 245 aa3.8□□□□□ -1.8
HMG20B-210ENST00000483417 MIR22HGQ0VDD5 57 aa3.8□□□□□ -1.8
HMG20B-210ENST00000483417 LOC100996750A0A140TA64 210 aa3.79□□□□□ -1.8
HMG20B-210ENST00000483417 KRTAP4-6Q9BYQ5 205 aa3.79□□□□□ -1.8
HMG20B-210ENST00000483417 A6NED7 52 aa3.78□□□□□ -1.8
HMG20B-210ENST00000483417 H3BS24 57 aa3.78□□□□□ -1.8
HMG20B-210ENST00000483417 C10orf95Q9H7T3 257 aa3.77□□□□□ -1.81
HMG20B-210ENST00000483417 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms