RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 MT-ATP8P03928 68 aa6.23□□□□□ -1.41
SSR1-208ENST00000483409 FAM236AA0A1B0GUQ0 79 aa6.2□□□□□ -1.42
SSR1-208ENST00000483409 FAM236BA0A1B0GV22 79 aa6.2□□□□□ -1.42
SSR1-208ENST00000483409 IMUPQ9GZP8 106 aa6.2□□□□□ -1.42
SSR1-208ENST00000483409 SSPOA2VEC9 5147 aa6.19□□□□□ -1.42
SSR1-208ENST00000483409 H3BPC8 53 aa6.17□□□□□ -1.42
SSR1-208ENST00000483409 A8MUN3 132 aa6.15□□□□□ -1.42
SSR1-208ENST00000483409 KRTAP19-1Q8IUB9 90 aa6.14□□□□□ -1.43
SSR1-208ENST00000483409 NDUFC1O43677 76 aa6.12□□□□□ -1.43
SSR1-208ENST00000483409 TRAV7A0A075B6U4 112 aa6.08□□□□□ -1.44
SSR1-208ENST00000483409 SMIM20Q8N5G0 67 aa6.08□□□□□ -1.44
SSR1-208ENST00000483409 DMAC1Q96GE9 116 aa6.05□□□□□ -1.44
SSR1-208ENST00000483409 KRTAP4-8Q9BYQ9 185 aa6.05□□□□□ -1.44
SSR1-208ENST00000483409 FCGBPQ9Y6R7 5405 aaPredicted RBP6.05□□□□□ -1.44
SSR1-208ENST00000483409 KRTAP19-6Q3LI70 58 aa6.04□□□□□ -1.44
SSR1-208ENST00000483409 SPRR2GQ9BYE4 73 aa6.02□□□□□ -1.45
SSR1-208ENST00000483409 H0YAA0 97 aa6□□□□□ -1.45
SSR1-208ENST00000483409 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.99□□□□□ -1.45
SSR1-208ENST00000483409 ADM2Q7Z4H4 148 aa5.98□□□□□ -1.45
SSR1-208ENST00000483409 SNURFQ9Y675 71 aa5.98□□□□□ -1.45
SSR1-208ENST00000483409 Q5VV11 94 aa5.97□□□□□ -1.45
SSR1-208ENST00000483409 CRIPTQ9P021 101 aa5.97□□□□□ -1.45
SSR1-208ENST00000483409 MT1BP07438 61 aa5.96□□□□□ -1.46
SSR1-208ENST00000483409 KRTAP19-8Q3LI54 63 aa5.96□□□□□ -1.46
SSR1-208ENST00000483409 ACYP2P14621 99 aa5.93□□□□□ -1.46
SSR1-208ENST00000483409 SERP2Q8N6R1 65 aa5.93□□□□□ -1.46
SSR1-208ENST00000483409 C20orf197Q8N268 126 aa5.92□□□□□ -1.46
SSR1-208ENST00000483409 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
SSR1-208ENST00000483409 P0C880 135 aa5.87□□□□□ -1.47
SSR1-208ENST00000483409 A6NN06 94 aa5.84□□□□□ -1.47
SSR1-208ENST00000483409 CHKB-CPT1BH3BT56 60 aa5.84□□□□□ -1.47
SSR1-208ENST00000483409 SPANXA2-OT1Q8N9U9 137 aa5.84□□□□□ -1.47
SSR1-208ENST00000483409 SPTSSBQ8NFR3 76 aa5.81□□□□□ -1.48
SSR1-208ENST00000483409 R4GN34 69 aa5.81□□□□□ -1.48
SSR1-208ENST00000483409 MACF1Q9UPN3 7388 aaKnown RBP5.8□□□□□ -1.48
SSR1-208ENST00000483409 COX7CP15954 63 aa5.79□□□□□ -1.48
SSR1-208ENST00000483409 M0QZ58 72 aa5.78□□□□□ -1.48
SSR1-208ENST00000483409 KRTAP10-5P60370 271 aa5.78□□□□□ -1.48
SSR1-208ENST00000483409 LCE3BQ5TA77 95 aa5.75□□□□□ -1.49
SSR1-208ENST00000483409 CYSTM1Q9H1C7 97 aa5.71□□□□□ -1.5
SSR1-208ENST00000483409 LINC01554Q52M75 96 aa5.7□□□□□ -1.5
SSR1-208ENST00000483409 PLAC4Q8WY50 150 aa5.7□□□□□ -1.5
SSR1-208ENST00000483409 COA5Q86WW8 74 aa5.69□□□□□ -1.5
SSR1-208ENST00000483409 H7BZZ5 65 aa5.68□□□□□ -1.5
SSR1-208ENST00000483409 KRTAP4-12Q9BQ66 201 aa5.68□□□□□ -1.5
SSR1-208ENST00000483409 ANAPC13Q9BS18 74 aa5.68□□□□□ -1.5
SSR1-208ENST00000483409 KRTAP9-9Q9BYP9 154 aa5.66□□□□□ -1.5
SSR1-208ENST00000483409 KRTAP9-4Q9BYQ2 154 aa5.66□□□□□ -1.5
SSR1-208ENST00000483409 SYNE2Q8WXH0 6885 aaKnown RBP5.64□□□□□ -1.51
SSR1-208ENST00000483409 MT1XP80297 61 aa5.63□□□□□ -1.51
SSR1-208ENST00000483409 KRTAP6-3Q3LI67 103 aa5.63□□□□□ -1.51
SSR1-208ENST00000483409 PRO2289Q9P1D8 64 aa5.62□□□□□ -1.51
SSR1-208ENST00000483409 KRTAP4-8A0A0G2JLE6 195 aa5.61□□□□□ -1.51
SSR1-208ENST00000483409 CCDC179H3BU77 68 aa5.57□□□□□ -1.52
SSR1-208ENST00000483409 KRTAP13-4Q3LI77 160 aa5.55□□□□□ -1.52
SSR1-208ENST00000483409 SEC61GP60059 68 aa5.52□□□□□ -1.53
SSR1-208ENST00000483409 SERP1Q9Y6X1 66 aa5.51□□□□□ -1.53
SSR1-208ENST00000483409 H3BS24 57 aa5.5□□□□□ -1.53
SSR1-208ENST00000483409 KMT2DO14686 5537 aa5.46□□□□□ -1.54
SSR1-208ENST00000483409 KRTAP5-9P26371 169 aa5.44□□□□□ -1.54
SSR1-208ENST00000483409 KRTAP12-2P59991 146 aa5.44□□□□□ -1.54
SSR1-208ENST00000483409 ATP5EP56381 51 aaPredicted RBP5.43□□□□□ -1.54
SSR1-208ENST00000483409 KRTAP4-7Q9BYR0 210 aa5.43□□□□□ -1.54
SSR1-208ENST00000483409 MUC12Q9UKN1 5478 aa5.42□□□□□ -1.54
SSR1-208ENST00000483409 A0A0D9SG42 100 aa5.41□□□□□ -1.54
SSR1-208ENST00000483409 A0A1B0GU33 70 aa5.41□□□□□ -1.54
SSR1-208ENST00000483409 SPATA8Q6RVD6 105 aa5.41□□□□□ -1.54
SSR1-208ENST00000483409 A0A1B0GU69 56 aa5.4□□□□□ -1.54
SSR1-208ENST00000483409 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
SSR1-208ENST00000483409 LCE1DQ5T752 114 aa5.37□□□□□ -1.55
SSR1-208ENST00000483409 CAMK2N1Q7Z7J9 78 aa5.37□□□□□ -1.55
SSR1-208ENST00000483409 KRTAP8-1Q8IUC2 63 aa5.37□□□□□ -1.55
SSR1-208ENST00000483409 TMEM258P61165 79 aa5.35□□□□□ -1.55
SSR1-208ENST00000483409 SPRR2FQ96RM1 72 aa5.34□□□□□ -1.55
SSR1-208ENST00000483409 KRTAP10-12P60413 245 aa5.33□□□□□ -1.56
SSR1-208ENST00000483409 SPINT4Q6UDR6 99 aa5.31□□□□□ -1.56
SSR1-208ENST00000483409 NEBP20929 6669 aa5.31□□□□□ -1.56
SSR1-208ENST00000483409 MDN1Q9NU22 5596 aa5.28□□□□□ -1.56
SSR1-208ENST00000483409 KRTAP12-1P59990 96 aa5.28□□□□□ -1.56
SSR1-208ENST00000483409 PRR15LQ9BU68 103 aa5.27□□□□□ -1.57
SSR1-208ENST00000483409 SMIM26A0A096LP01 95 aa5.26□□□□□ -1.57
SSR1-208ENST00000483409 A8MU10 97 aa5.25□□□□□ -1.57
SSR1-208ENST00000483409 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
SSR1-208ENST00000483409 LINC01558Q9Y6Z2 57 aa5.25□□□□□ -1.57
SSR1-208ENST00000483409 SPRR2EP22531 72 aa5.23□□□□□ -1.57
SSR1-208ENST00000483409 SPRR2BP35325 72 aa5.23□□□□□ -1.57
SSR1-208ENST00000483409 SPRR2AP35326 72 aa5.23□□□□□ -1.57
SSR1-208ENST00000483409 KRTAP4-2Q9BYR5 136 aa5.21□□□□□ -1.58
SSR1-208ENST00000483409 LCE1AQ5T7P2 110 aa5.17□□□□□ -1.58
SSR1-208ENST00000483409 KRTAP20-1Q3LI63 56 aa5.16□□□□□ -1.58
SSR1-208ENST00000483409 UQCR11O14957 56 aa5.09□□□□□ -1.59
SSR1-208ENST00000483409 KRTAP2-3P0C7H8 128 aa5.05□□□□□ -1.6
SSR1-208ENST00000483409 SPRR2DP22532 72 aa5.05□□□□□ -1.6
SSR1-208ENST00000483409 KRTAP2-4Q9BYR9 128 aa5.05□□□□□ -1.6
SSR1-208ENST00000483409 C10orf95Q9H7T3 257 aa5.03□□□□□ -1.6
SSR1-208ENST00000483409 PSPHP1O15172 72 aa5.02□□□□□ -1.61
SSR1-208ENST00000483409 KRTAP19-7Q3SYF9 63 aa5.02□□□□□ -1.61
SSR1-208ENST00000483409 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
SSR1-208ENST00000483409 V9GYY9 64 aa5.02□□□□□ -1.61
SSR1-208ENST00000483409 MIR22HGQ0VDD5 57 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms