RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 TRAV7A0A075B6U4 112 aa2.32□□□□□ -2.04
HDAC9-224ENST00000483142 H0Y9P7 68 aa2.32□□□□□ -2.04
HDAC9-224ENST00000483142 SCGB1A1P11684 91 aa2.32□□□□□ -2.04
HDAC9-224ENST00000483142 C5orf47Q569G3 176 aa2.32□□□□□ -2.04
HDAC9-224ENST00000483142 MUC2Q02817 5179 aa2.31□□□□□ -2.04
HDAC9-224ENST00000483142 IGKV2D-30A0A075B6S6 120 aa2.3□□□□□ -2.04
HDAC9-224ENST00000483142 MP68P56378 58 aa2.3□□□□□ -2.04
HDAC9-224ENST00000483142 SERP2Q8N6R1 65 aa2.3□□□□□ -2.04
HDAC9-224ENST00000483142 CYP4F30PQ9H0H9 118 aa2.3□□□□□ -2.04
HDAC9-224ENST00000483142 MT1HP80294 61 aa2.29□□□□□ -2.04
HDAC9-224ENST00000483142 COX6B2Q6YFQ2 88 aa2.29□□□□□ -2.04
HDAC9-224ENST00000483142 RBM12B-AS1Q9P1G2 102 aa2.29□□□□□ -2.04
HDAC9-224ENST00000483142 FLGP20930 4061 aaPredicted RBP2.28□□□□□ -2.04
HDAC9-224ENST00000483142 KLKP1Q107X0 134 aa2.28□□□□□ -2.04
HDAC9-224ENST00000483142 C1orf64Q8NEQ6 169 aa2.28□□□□□ -2.04
HDAC9-224ENST00000483142 LINC00208Q96KT6 92 aa2.28□□□□□ -2.04
HDAC9-224ENST00000483142 COX7CP15954 63 aa2.27□□□□□ -2.05
HDAC9-224ENST00000483142 PRAC1Q96KF2 57 aa2.27□□□□□ -2.05
HDAC9-224ENST00000483142 A8MUN3 132 aa2.26□□□□□ -2.05
HDAC9-224ENST00000483142 C4orf26Q17RF5 130 aa2.25□□□□□ -2.05
HDAC9-224ENST00000483142 SPANXA2-OT1Q8N9U9 137 aa2.25□□□□□ -2.05
HDAC9-224ENST00000483142 DMAC1Q96GE9 116 aa2.25□□□□□ -2.05
HDAC9-224ENST00000483142 FAM236DA0A1B0GTK5 79 aa2.24□□□□□ -2.05
HDAC9-224ENST00000483142 FAM236CP0DP71 79 aa2.24□□□□□ -2.05
HDAC9-224ENST00000483142 H1FX-AS1Q4G0G2 97 aa2.24□□□□□ -2.05
HDAC9-224ENST00000483142 C20orf197Q8N268 126 aa2.24□□□□□ -2.05
HDAC9-224ENST00000483142 ANAPC13Q9BS18 74 aa2.24□□□□□ -2.05
HDAC9-224ENST00000483142 H7BZZ5 65 aa2.22□□□□□ -2.05
HDAC9-224ENST00000483142 NDUFC1O43677 76 aa2.22□□□□□ -2.05
HDAC9-224ENST00000483142 KRTAP10-6P60371 365 aaPredicted RBP2.22□□□□□ -2.05
HDAC9-224ENST00000483142 CYSTM1Q9H1C7 97 aa2.22□□□□□ -2.05
HDAC9-224ENST00000483142 SNURFQ9Y675 71 aa2.22□□□□□ -2.05
HDAC9-224ENST00000483142 KRTAP5-3Q6L8H2 238 aa2.2□□□□□ -2.06
HDAC9-224ENST00000483142 S4R3F8 94 aa2.2□□□□□ -2.06
HDAC9-224ENST00000483142 CCDC179H3BU77 68 aa2.19□□□□□ -2.06
HDAC9-224ENST00000483142 LCA10Q71F78 164 aa2.19□□□□□ -2.06
HDAC9-224ENST00000483142 H0YAA0 97 aa2.18□□□□□ -2.06
HDAC9-224ENST00000483142 MT2AP02795 61 aa2.18□□□□□ -2.06
HDAC9-224ENST00000483142 ATP5EP56381 51 aaPredicted RBP2.18□□□□□ -2.06
HDAC9-224ENST00000483142 KRTAP9-8Q9BYQ0 159 aa2.18□□□□□ -2.06
HDAC9-224ENST00000483142 MT1FP04733 61 aa2.16□□□□□ -2.06
HDAC9-224ENST00000483142 ACYP2P14621 99 aa2.16□□□□□ -2.06
HDAC9-224ENST00000483142 TMEM258P61165 79 aa2.16□□□□□ -2.06
HDAC9-224ENST00000483142 M0R2T5 61 aa2.15□□□□□ -2.07
HDAC9-224ENST00000483142 CSAG1Q6PB30 78 aa2.15□□□□□ -2.07
HDAC9-224ENST00000483142 COA5Q86WW8 74 aa2.14□□□□□ -2.07
HDAC9-224ENST00000483142 SPTSSBQ8NFR3 76 aa2.12□□□□□ -2.07
HDAC9-224ENST00000483142 KRTAP2-2Q9BYT5 123 aa2.12□□□□□ -2.07
HDAC9-224ENST00000483142 CHKB-CPT1BH3BT56 60 aa2.1□□□□□ -2.07
HDAC9-224ENST00000483142 CRIPTQ9P021 101 aa2.1□□□□□ -2.07
HDAC9-224ENST00000483142 SPRR2GQ9BYE4 73 aa2.09□□□□□ -2.07
HDAC9-224ENST00000483142 KRTAP10-10P60014 251 aa2.08□□□□□ -2.08
HDAC9-224ENST00000483142 KRTAP19-8Q3LI54 63 aa2.07□□□□□ -2.08
HDAC9-224ENST00000483142 SERP1Q9Y6X1 66 aa2.07□□□□□ -2.08
HDAC9-224ENST00000483142 P0C880 135 aa2.06□□□□□ -2.08
HDAC9-224ENST00000483142 ADM2Q7Z4H4 148 aa2.06□□□□□ -2.08
HDAC9-224ENST00000483142 USH2AO75445 5202 aa2.06□□□□□ -2.08
HDAC9-224ENST00000483142 MT1BP07438 61 aa2.04□□□□□ -2.08
HDAC9-224ENST00000483142 MT3P25713 68 aa2.04□□□□□ -2.08
HDAC9-224ENST00000483142 LCE1FQ5T754 118 aa2.04□□□□□ -2.08
HDAC9-224ENST00000483142 LINC01558Q9Y6Z2 57 aa2.04□□□□□ -2.08
HDAC9-224ENST00000483142 SSPOA2VEC9 5147 aa2.03□□□□□ -2.08
HDAC9-224ENST00000483142 NDUFAF8A1L188 74 aa2.03□□□□□ -2.08
HDAC9-224ENST00000483142 Q5VV11 94 aa2.03□□□□□ -2.08
HDAC9-224ENST00000483142 M0QZ58 72 aa2.02□□□□□ -2.09
HDAC9-224ENST00000483142 RPS28P62857 69 aaKnown RBP2.02□□□□□ -2.09
HDAC9-224ENST00000483142 CRCT1Q9UGL9 99 aa2.02□□□□□ -2.09
HDAC9-224ENST00000483142 A6NN06 94 aa2.01□□□□□ -2.09
HDAC9-224ENST00000483142 R4GN34 69 aa2.01□□□□□ -2.09
HDAC9-224ENST00000483142 A0A1B0GU69 56 aa2□□□□□ -2.09
HDAC9-224ENST00000483142 Q1T7F1 81 aa2□□□□□ -2.09
HDAC9-224ENST00000483142 KRTAP19-6Q3LI70 58 aa2□□□□□ -2.09
HDAC9-224ENST00000483142 KRTAP13-4Q3LI77 160 aa2□□□□□ -2.09
HDAC9-224ENST00000483142 SMIM26A0A096LP01 95 aa1.99□□□□□ -2.09
HDAC9-224ENST00000483142 SEC61GP60059 68 aa1.99□□□□□ -2.09
HDAC9-224ENST00000483142 PRR15LQ9BU68 103 aa1.99□□□□□ -2.09
HDAC9-224ENST00000483142 V9GYY9 64 aa1.99□□□□□ -2.09
HDAC9-224ENST00000483142 FSIP2Q5CZC0 6907 aa1.98□□□□□ -2.09
HDAC9-224ENST00000483142 A0A1B0GU33 70 aa1.96□□□□□ -2.1
HDAC9-224ENST00000483142 KRTAP10-5P60370 271 aa1.95□□□□□ -2.1
HDAC9-224ENST00000483142 UQCR11O14957 56 aa1.93□□□□□ -2.1
HDAC9-224ENST00000483142 MT1XP80297 61 aa1.93□□□□□ -2.1
HDAC9-224ENST00000483142 SPATA8Q6RVD6 105 aa1.93□□□□□ -2.1
HDAC9-224ENST00000483142 FCGBPQ9Y6R7 5405 aaPredicted RBP1.93□□□□□ -2.1
HDAC9-224ENST00000483142 KRTAP12-1P59990 96 aa1.92□□□□□ -2.1
HDAC9-224ENST00000483142 PSPHP1O15172 72 aa1.91□□□□□ -2.1
HDAC9-224ENST00000483142 LINC01554Q52M75 96 aa1.91□□□□□ -2.1
HDAC9-224ENST00000483142 PLAC4Q8WY50 150 aa1.91□□□□□ -2.1
HDAC9-224ENST00000483142 KRTAP10-12P60413 245 aa1.9□□□□□ -2.11
HDAC9-224ENST00000483142 PRO2289Q9P1D8 64 aa1.9□□□□□ -2.11
HDAC9-224ENST00000483142 A8MU10 97 aa1.89□□□□□ -2.11
HDAC9-224ENST00000483142 KRTAP12-2P59991 146 aa1.89□□□□□ -2.11
HDAC9-224ENST00000483142 MIR22HGQ0VDD5 57 aa1.89□□□□□ -2.11
HDAC9-224ENST00000483142 MACF1Q9UPN3 7388 aaKnown RBP1.88□□□□□ -2.11
HDAC9-224ENST00000483142 A0A0D9SG42 100 aa1.87□□□□□ -2.11
HDAC9-224ENST00000483142 A6NED7 52 aa1.86□□□□□ -2.11
HDAC9-224ENST00000483142 CDC42SE1Q9NRR8 79 aa1.86□□□□□ -2.11
HDAC9-224ENST00000483142 LCE3CQ5T5A8 94 aa1.85□□□□□ -2.11
HDAC9-224ENST00000483142 SPINT4Q6UDR6 99 aa1.85□□□□□ -2.11
HDAC9-224ENST00000483142 CAMK2N1Q7Z7J9 78 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms