RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 TMEM254Q8TBM7 123 aa6.58□□□□□ -1.36
COL21A1-209ENST00000482933 TP53AIP1Q9HCN2 124 aa6.58□□□□□ -1.36
COL21A1-209ENST00000482933 RPS28P62857 69 aaKnown RBP6.54□□□□□ -1.36
COL21A1-209ENST00000482933 A0A1B0GVX0 72 aa6.53□□□□□ -1.36
COL21A1-209ENST00000482933 hDV103S1A0JD37 113 aa6.53□□□□□ -1.36
COL21A1-209ENST00000482933 C8orf87E5RJ46 101 aa6.53□□□□□ -1.36
COL21A1-209ENST00000482933 KRTAP16-1A8MUX0 517 aa6.52□□□□□ -1.37
COL21A1-209ENST00000482933 WFDC13Q8IUB5 93 aa6.52□□□□□ -1.37
COL21A1-209ENST00000482933 IGHV6-1A0A0B4J1U7 121 aa6.5□□□□□ -1.37
COL21A1-209ENST00000482933 FAM236DA0A1B0GTK5 79 aa6.5□□□□□ -1.37
COL21A1-209ENST00000482933 FAM236CP0DP71 79 aa6.5□□□□□ -1.37
COL21A1-209ENST00000482933 NOTCH2NLQ7Z3S9 236 aa6.5□□□□□ -1.37
COL21A1-209ENST00000482933 C8orf17Q9NRJ1 99 aa6.5□□□□□ -1.37
COL21A1-209ENST00000482933 MMP24-AS1A0A0U1RRL7 71 aa6.49□□□□□ -1.37
COL21A1-209ENST00000482933 H7BZZ5 65 aa6.49□□□□□ -1.37
COL21A1-209ENST00000482933 SNURFQ9Y675 71 aa6.49□□□□□ -1.37
COL21A1-209ENST00000482933 MRPL34Q9BQ48 92 aaKnown RBP6.46□□□□□ -1.38
COL21A1-209ENST00000482933 RBM12B-AS1Q9P1G2 102 aa6.46□□□□□ -1.38
COL21A1-209ENST00000482933 TRAV22A0A0B4J277 110 aa6.44□□□□□ -1.38
COL21A1-209ENST00000482933 H0Y9P7 68 aa6.43□□□□□ -1.38
COL21A1-209ENST00000482933 SERP1Q9Y6X1 66 aa6.43□□□□□ -1.38
COL21A1-209ENST00000482933 NDUFS5O43920 106 aa6.42□□□□□ -1.38
COL21A1-209ENST00000482933 HRES1P13985 223 aa6.42□□□□□ -1.38
COL21A1-209ENST00000482933 MPLKIPQ8TAP9 179 aa6.42□□□□□ -1.38
COL21A1-209ENST00000482933 ZCCHC13Q8WW36 166 aaKnown RBP6.4□□□□□ -1.39
COL21A1-209ENST00000482933 LINC00208Q96KT6 92 aa6.4□□□□□ -1.39
COL21A1-209ENST00000482933 CYSTM1Q9H1C7 97 aa6.4□□□□□ -1.39
COL21A1-209ENST00000482933 SPANXA2-OT1Q8N9U9 137 aa6.39□□□□□ -1.39
COL21A1-209ENST00000482933 C1orf64Q8NEQ6 169 aa6.39□□□□□ -1.39
COL21A1-209ENST00000482933 LOC101927531A0A1B0GV80 90 aa6.36□□□□□ -1.39
COL21A1-209ENST00000482933 SPINK7P58062 85 aa6.33□□□□□ -1.4
COL21A1-209ENST00000482933 KRTAP2-2Q9BYT5 123 aa6.33□□□□□ -1.4
COL21A1-209ENST00000482933 CYP4F30PQ9H0H9 118 aa6.33□□□□□ -1.4
COL21A1-209ENST00000482933 SMIM26A0A096LP01 95 aa6.32□□□□□ -1.4
COL21A1-209ENST00000482933 MT2AP02795 61 aa6.32□□□□□ -1.4
COL21A1-209ENST00000482933 IGKV2D-30A0A075B6S6 120 aa6.31□□□□□ -1.4
COL21A1-209ENST00000482933 KRTAP10-7P60409 375 aaPredicted RBP6.28□□□□□ -1.4
COL21A1-209ENST00000482933 USH2AO75445 5202 aa6.26□□□□□ -1.41
COL21A1-209ENST00000482933 MT1FP04733 61 aa6.26□□□□□ -1.41
COL21A1-209ENST00000482933 KRTAP10-10P60014 251 aa6.26□□□□□ -1.41
COL21A1-209ENST00000482933 V9GYY9 64 aa6.24□□□□□ -1.41
COL21A1-209ENST00000482933 SSPOA2VEC9 5147 aa6.23□□□□□ -1.41
COL21A1-209ENST00000482933 Q5W150 140 aa6.21□□□□□ -1.42
COL21A1-209ENST00000482933 ACYP2P14621 99 aa6.16□□□□□ -1.42
COL21A1-209ENST00000482933 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.15□□□□□ -1.43
COL21A1-209ENST00000482933 H1FX-AS1Q4G0G2 97 aa6.13□□□□□ -1.43
COL21A1-209ENST00000482933 C7orf65Q6ZTY9 151 aa6.13□□□□□ -1.43
COL21A1-209ENST00000482933 KRTAP5-11Q6L8G4 156 aa6.12□□□□□ -1.43
COL21A1-209ENST00000482933 Q1T7F1 81 aa6.11□□□□□ -1.43
COL21A1-209ENST00000482933 COA5Q86WW8 74 aa6.1□□□□□ -1.43
COL21A1-209ENST00000482933 A8MUN3 132 aa6.09□□□□□ -1.43
COL21A1-209ENST00000482933 CHKB-CPT1BH3BT56 60 aa6.08□□□□□ -1.44
COL21A1-209ENST00000482933 FCGBPQ9Y6R7 5405 aaPredicted RBP6.07□□□□□ -1.44
COL21A1-209ENST00000482933 DMAC1Q96GE9 116 aa6.07□□□□□ -1.44
COL21A1-209ENST00000482933 LCE1EQ5T753 118 aa6.04□□□□□ -1.44
COL21A1-209ENST00000482933 MT3P25713 68 aa6.03□□□□□ -1.44
COL21A1-209ENST00000482933 C4orf26Q17RF5 130 aa6.02□□□□□ -1.45
COL21A1-209ENST00000482933 SPTSSBQ8NFR3 76 aa6.02□□□□□ -1.45
COL21A1-209ENST00000482933 KRTAP19-6Q3LI70 58 aa6.01□□□□□ -1.45
COL21A1-209ENST00000482933 PRR15LQ9BU68 103 aa5.99□□□□□ -1.45
COL21A1-209ENST00000482933 MACF1Q9UPN3 7388 aaKnown RBP5.96□□□□□ -1.46
COL21A1-209ENST00000482933 LINC01558Q9Y6Z2 57 aa5.95□□□□□ -1.46
COL21A1-209ENST00000482933 PSPHP1O15172 72 aa5.9□□□□□ -1.47
COL21A1-209ENST00000482933 SVIPQ8NHG7 77 aa5.9□□□□□ -1.47
COL21A1-209ENST00000482933 S4R3F8 94 aa5.9□□□□□ -1.47
COL21A1-209ENST00000482933 SEC61GP60059 68 aa5.89□□□□□ -1.47
COL21A1-209ENST00000482933 PRO0628Q9UI54 55 aa5.89□□□□□ -1.47
COL21A1-209ENST00000482933 SYNE2Q8WXH0 6885 aaKnown RBP5.89□□□□□ -1.47
COL21A1-209ENST00000482933 CSAG1Q6PB30 78 aa5.87□□□□□ -1.47
COL21A1-209ENST00000482933 BRK1Q8WUW1 75 aa5.86□□□□□ -1.47
COL21A1-209ENST00000482933 A0A1B0GU69 56 aa5.85□□□□□ -1.47
COL21A1-209ENST00000482933 Q5VV11 94 aa5.84□□□□□ -1.47
COL21A1-209ENST00000482933 LCA10Q71F78 164 aa5.83□□□□□ -1.48
COL21A1-209ENST00000482933 A6NED7 52 aa5.82□□□□□ -1.48
COL21A1-209ENST00000482933 KRTAP6-3Q3LI67 103 aa5.76□□□□□ -1.49
COL21A1-209ENST00000482933 SPRR2GQ9BYE4 73 aa5.76□□□□□ -1.49
COL21A1-209ENST00000482933 CDC42SE1Q9NRR8 79 aa5.75□□□□□ -1.49
COL21A1-209ENST00000482933 UQCR11O14957 56 aa5.74□□□□□ -1.49
COL21A1-209ENST00000482933 A6NN06 94 aa5.74□□□□□ -1.49
COL21A1-209ENST00000482933 MT1BP07438 61 aa5.73□□□□□ -1.49
COL21A1-209ENST00000482933 KRTAP19-8Q3LI54 63 aa5.73□□□□□ -1.49
COL21A1-209ENST00000482933 CRIPTQ9P021 101 aa5.68□□□□□ -1.5
COL21A1-209ENST00000482933 MIR22HGQ0VDD5 57 aa5.65□□□□□ -1.51
COL21A1-209ENST00000482933 SPATA8Q6RVD6 105 aa5.64□□□□□ -1.51
COL21A1-209ENST00000482933 KRTAP10-5P60370 271 aa5.63□□□□□ -1.51
COL21A1-209ENST00000482933 H0YAA0 97 aa5.61□□□□□ -1.51
COL21A1-209ENST00000482933 A0A1B0GU33 70 aa5.6□□□□□ -1.51
COL21A1-209ENST00000482933 PMAIP1Q13794 54 aa5.59□□□□□ -1.51
COL21A1-209ENST00000482933 K7ERS5 55 aa5.54□□□□□ -1.52
COL21A1-209ENST00000482933 ADM2Q7Z4H4 148 aa5.53□□□□□ -1.52
COL21A1-209ENST00000482933 MUC12Q9UKN1 5478 aa5.53□□□□□ -1.52
COL21A1-209ENST00000482933 NEBP20929 6669 aa5.5□□□□□ -1.53
COL21A1-209ENST00000482933 KRTAP5-9P26371 169 aa5.47□□□□□ -1.53
COL21A1-209ENST00000482933 PRO2289Q9P1D8 64 aa5.44□□□□□ -1.54
COL21A1-209ENST00000482933 A8MU10 97 aa5.42□□□□□ -1.54
COL21A1-209ENST00000482933 M0QZ58 72 aa5.42□□□□□ -1.54
COL21A1-209ENST00000482933 KTN1-AS1Q86SY8 53 aa5.42□□□□□ -1.54
COL21A1-209ENST00000482933 PLAC4Q8WY50 150 aa5.42□□□□□ -1.54
COL21A1-209ENST00000482933 R4GN34 69 aa5.41□□□□□ -1.54
COL21A1-209ENST00000482933 KRTAP20-1Q3LI63 56 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms