RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 USH2AO75445 5202 aa7.61□□□□□ -1.19
CCDC78-212ENST00000482152 KRTAP3-3Q9BYR6 98 aa7.59□□□□□ -1.19
CCDC78-212ENST00000482152 NDUFC1O43677 76 aa7.57□□□□□ -1.2
CCDC78-212ENST00000482152 TRAV7A0A075B6U4 112 aa7.55□□□□□ -1.2
CCDC78-212ENST00000482152 FAM236AA0A1B0GUQ0 79 aa7.55□□□□□ -1.2
CCDC78-212ENST00000482152 FAM236BA0A1B0GV22 79 aa7.55□□□□□ -1.2
CCDC78-212ENST00000482152 SSPOA2VEC9 5147 aa7.46□□□□□ -1.21
CCDC78-212ENST00000482152 H0YAA0 97 aa7.46□□□□□ -1.22
CCDC78-212ENST00000482152 DMAC1Q96GE9 116 aa7.46□□□□□ -1.22
CCDC78-212ENST00000482152 CRIPTQ9P021 101 aa7.43□□□□□ -1.22
CCDC78-212ENST00000482152 KRTAP19-1Q8IUB9 90 aa7.42□□□□□ -1.22
CCDC78-212ENST00000482152 SPRR2GQ9BYE4 73 aa7.4□□□□□ -1.22
CCDC78-212ENST00000482152 ACYP2P14621 99 aa7.37□□□□□ -1.23
CCDC78-212ENST00000482152 KRTAP19-6Q3LI70 58 aa7.37□□□□□ -1.23
CCDC78-212ENST00000482152 SERP2Q8N6R1 65 aa7.37□□□□□ -1.23
CCDC78-212ENST00000482152 FCGBPQ9Y6R7 5405 aaPredicted RBP7.31□□□□□ -1.24
CCDC78-212ENST00000482152 KRTAP19-8Q3LI54 63 aa7.31□□□□□ -1.24
CCDC78-212ENST00000482152 Q5VV11 94 aa7.31□□□□□ -1.24
CCDC78-212ENST00000482152 ADM2Q7Z4H4 148 aa7.31□□□□□ -1.24
CCDC78-212ENST00000482152 SNURFQ9Y675 71 aa7.3□□□□□ -1.24
CCDC78-212ENST00000482152 C20orf197Q8N268 126 aa7.29□□□□□ -1.24
CCDC78-212ENST00000482152 SPANXA2-OT1Q8N9U9 137 aa7.28□□□□□ -1.24
CCDC78-212ENST00000482152 SPTSSBQ8NFR3 76 aa7.28□□□□□ -1.24
CCDC78-212ENST00000482152 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.27□□□□□ -1.25
CCDC78-212ENST00000482152 MT1BP07438 61 aa7.23□□□□□ -1.25
CCDC78-212ENST00000482152 CHKB-CPT1BH3BT56 60 aa7.2□□□□□ -1.26
CCDC78-212ENST00000482152 COX7CP15954 63 aa7.19□□□□□ -1.26
CCDC78-212ENST00000482152 KRTAP9-7A8MTY7 169 aa7.18□□□□□ -1.26
CCDC78-212ENST00000482152 R4GN34 69 aa7.15□□□□□ -1.26
CCDC78-212ENST00000482152 P0C880 135 aa7.14□□□□□ -1.27
CCDC78-212ENST00000482152 KRTAP3-2Q9BYR7 98 aa7.13□□□□□ -1.27
CCDC78-212ENST00000482152 A6NN06 94 aa7.12□□□□□ -1.27
CCDC78-212ENST00000482152 KRTAP10-5P60370 271 aa7.07□□□□□ -1.28
CCDC78-212ENST00000482152 M0QZ58 72 aa7.06□□□□□ -1.28
CCDC78-212ENST00000482152 ANAPC13Q9BS18 74 aa7.04□□□□□ -1.28
CCDC78-212ENST00000482152 MACF1Q9UPN3 7388 aaKnown RBP7.02□□□□□ -1.28
CCDC78-212ENST00000482152 H7BZZ5 65 aa7.02□□□□□ -1.29
CCDC78-212ENST00000482152 PLAC4Q8WY50 150 aa7.02□□□□□ -1.29
CCDC78-212ENST00000482152 COA5Q86WW8 74 aa7□□□□□ -1.29
CCDC78-212ENST00000482152 PRO2289Q9P1D8 64 aa6.96□□□□□ -1.3
CCDC78-212ENST00000482152 SYNE2Q8WXH0 6885 aaKnown RBP6.94□□□□□ -1.3
CCDC78-212ENST00000482152 CYSTM1Q9H1C7 97 aa6.94□□□□□ -1.3
CCDC78-212ENST00000482152 LINC01554Q52M75 96 aa6.92□□□□□ -1.3
CCDC78-212ENST00000482152 SEC61GP60059 68 aa6.9□□□□□ -1.3
CCDC78-212ENST00000482152 KRTAP6-3Q3LI67 103 aa6.88□□□□□ -1.31
CCDC78-212ENST00000482152 SERP1Q9Y6X1 66 aa6.86□□□□□ -1.31
CCDC78-212ENST00000482152 CCDC179H3BU77 68 aa6.83□□□□□ -1.32
CCDC78-212ENST00000482152 MT1XP80297 61 aa6.83□□□□□ -1.32
CCDC78-212ENST00000482152 ATP5EP56381 51 aaPredicted RBP6.81□□□□□ -1.32
CCDC78-212ENST00000482152 KRTAP13-4Q3LI77 160 aa6.73□□□□□ -1.33
CCDC78-212ENST00000482152 A0A1B0GU33 70 aa6.71□□□□□ -1.34
CCDC78-212ENST00000482152 KRTAP12-2P59991 146 aa6.7□□□□□ -1.34
CCDC78-212ENST00000482152 A0A1B0GU69 56 aa6.68□□□□□ -1.34
CCDC78-212ENST00000482152 TMEM258P61165 79 aa6.67□□□□□ -1.34
CCDC78-212ENST00000482152 KRTAP5-9P26371 169 aa6.65□□□□□ -1.34
CCDC78-212ENST00000482152 CAMK2N1Q7Z7J9 78 aa6.6□□□□□ -1.35
CCDC78-212ENST00000482152 SPATA8Q6RVD6 105 aa6.59□□□□□ -1.35
CCDC78-212ENST00000482152 PRR15LQ9BU68 103 aa6.59□□□□□ -1.35
CCDC78-212ENST00000482152 A0A0D9SG42 100 aa6.56□□□□□ -1.36
CCDC78-212ENST00000482152 SMIM26A0A096LP01 95 aa6.55□□□□□ -1.36
CCDC78-212ENST00000482152 NEBP20929 6669 aa6.55□□□□□ -1.36
CCDC78-212ENST00000482152 KRTAP10-12P60413 245 aa6.53□□□□□ -1.36
CCDC78-212ENST00000482152 KRTAP8-1Q8IUC2 63 aa6.53□□□□□ -1.36
CCDC78-212ENST00000482152 LINC01558Q9Y6Z2 57 aa6.53□□□□□ -1.36
CCDC78-212ENST00000482152 MUC12Q9UKN1 5478 aa6.51□□□□□ -1.37
CCDC78-212ENST00000482152 KRTAP10-7P60409 375 aaPredicted RBP6.51□□□□□ -1.37
CCDC78-212ENST00000482152 KMT2DO14686 5537 aa6.51□□□□□ -1.37
CCDC78-212ENST00000482152 SPINT4Q6UDR6 99 aa6.49□□□□□ -1.37
CCDC78-212ENST00000482152 KRTAP12-1P59990 96 aa6.47□□□□□ -1.37
CCDC78-212ENST00000482152 SPRR2FQ96RM1 72 aa6.46□□□□□ -1.38
CCDC78-212ENST00000482152 KRTAP4-8A0A0G2JLE6 195 aa6.44□□□□□ -1.38
CCDC78-212ENST00000482152 KRTAP4-8Q9BYQ9 185 aa6.44□□□□□ -1.38
CCDC78-212ENST00000482152 MDN1Q9NU22 5596 aa6.41□□□□□ -1.38
CCDC78-212ENST00000482152 A8MU10 97 aa6.37□□□□□ -1.39
CCDC78-212ENST00000482152 UQCR11O14957 56 aa6.36□□□□□ -1.39
CCDC78-212ENST00000482152 V9GYY9 64 aa6.34□□□□□ -1.39
CCDC78-212ENST00000482152 SPRR2EP22531 72 aa6.32□□□□□ -1.4
CCDC78-212ENST00000482152 SPRR2BP35325 72 aa6.32□□□□□ -1.4
CCDC78-212ENST00000482152 SPRR2AP35326 72 aa6.32□□□□□ -1.4
CCDC78-212ENST00000482152 KRTAP20-1Q3LI63 56 aa6.32□□□□□ -1.4
CCDC78-212ENST00000482152 LCE1AQ5T7P2 110 aa6.27□□□□□ -1.41
CCDC78-212ENST00000482152 Q1T7F1 81 aa6.26□□□□□ -1.41
CCDC78-212ENST00000482152 MIR22HGQ0VDD5 57 aa6.2□□□□□ -1.42
CCDC78-212ENST00000482152 KRTAP2-3P0C7H8 128 aa6.18□□□□□ -1.42
CCDC78-212ENST00000482152 PCP4P48539 62 aa6.18□□□□□ -1.42
CCDC78-212ENST00000482152 KRTAP2-4Q9BYR9 128 aa6.18□□□□□ -1.42
CCDC78-212ENST00000482152 TNP1P09430 55 aa6.16□□□□□ -1.42
CCDC78-212ENST00000482152 RPS28P62857 69 aaKnown RBP6.16□□□□□ -1.42
CCDC78-212ENST00000482152 PSPHP1O15172 72 aa6.15□□□□□ -1.42
CCDC78-212ENST00000482152 C10orf95Q9H7T3 257 aa6.15□□□□□ -1.42
CCDC78-212ENST00000482152 K7ERS5 55 aa6.11□□□□□ -1.43
CCDC78-212ENST00000482152 SPRR2DP22532 72 aa6.11□□□□□ -1.43
CCDC78-212ENST00000482152 KRTAP19-7Q3SYF9 63 aa6.11□□□□□ -1.43
CCDC78-212ENST00000482152 MT1EP04732 61 aa6.05□□□□□ -1.44
CCDC78-212ENST00000482152 KRTAP19-5Q3LI72 72 aa6.01□□□□□ -1.45
CCDC78-212ENST00000482152 KRTAP2-2Q9BYT5 123 aa6□□□□□ -1.45
CCDC78-212ENST00000482152 KRTAP2-1Q9BYU5 128 aa6□□□□□ -1.45
CCDC78-212ENST00000482152 A6NED7 52 aa5.99□□□□□ -1.45
CCDC78-212ENST00000482152 KRTAP19-3Q7Z4W3 81 aa5.99□□□□□ -1.45
CCDC78-212ENST00000482152 LCE3AQ5TA76 89 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms