RNA–Protein interactions for RNA: ENST00000482050.1

DDR1-243, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-243ENST00000482050 KRTAP9-6A0A140TA67 174 aa8.11□□□□□ -1.11
DDR1-243ENST00000482050 SNURFQ9Y675 71 aa8.1□□□□□ -1.11
DDR1-243ENST00000482050 CRCT1Q9UGL9 99 aa8.09□□□□□ -1.11
DDR1-243ENST00000482050 NDUFC1O43677 76 aa8.08□□□□□ -1.12
DDR1-243ENST00000482050 SERP2Q8N6R1 65 aa8.08□□□□□ -1.12
DDR1-243ENST00000482050 LCE2BO14633 110 aa8.07□□□□□ -1.12
DDR1-243ENST00000482050 FSIP2Q5CZC0 6907 aa8.07□□□□□ -1.12
DDR1-243ENST00000482050 DMAC1Q96GE9 116 aa8.06□□□□□ -1.12
DDR1-243ENST00000482050 C20orf197Q8N268 126 aa8.05□□□□□ -1.12
DDR1-243ENST00000482050 USH2AO75445 5202 aa7.98□□□□□ -1.13
DDR1-243ENST00000482050 ACYP2P14621 99 aa7.92□□□□□ -1.14
DDR1-243ENST00000482050 COX7CP15954 63 aa7.92□□□□□ -1.14
DDR1-243ENST00000482050 KRTAP19-1Q8IUB9 90 aa7.89□□□□□ -1.15
DDR1-243ENST00000482050 H0YAA0 97 aa7.88□□□□□ -1.15
DDR1-243ENST00000482050 ADM2Q7Z4H4 148 aa7.88□□□□□ -1.15
DDR1-243ENST00000482050 SPANXA2-OT1Q8N9U9 137 aa7.86□□□□□ -1.15
DDR1-243ENST00000482050 ANAPC13Q9BS18 74 aa7.83□□□□□ -1.16
DDR1-243ENST00000482050 CHKB-CPT1BH3BT56 60 aa7.82□□□□□ -1.16
DDR1-243ENST00000482050 SSPOA2VEC9 5147 aa7.82□□□□□ -1.16
DDR1-243ENST00000482050 SPRR2GQ9BYE4 73 aa7.81□□□□□ -1.16
DDR1-243ENST00000482050 CYSTM1Q9H1C7 97 aa7.8□□□□□ -1.16
DDR1-243ENST00000482050 CRIPTQ9P021 101 aa7.78□□□□□ -1.16
DDR1-243ENST00000482050 SPTSSBQ8NFR3 76 aa7.76□□□□□ -1.17
DDR1-243ENST00000482050 H7BZZ5 65 aa7.74□□□□□ -1.17
DDR1-243ENST00000482050 P0C880 135 aa7.74□□□□□ -1.17
DDR1-243ENST00000482050 Q5VV11 94 aa7.72□□□□□ -1.17
DDR1-243ENST00000482050 MT1BP07438 61 aa7.71□□□□□ -1.18
DDR1-243ENST00000482050 KRTAP19-8Q3LI54 63 aa7.71□□□□□ -1.18
DDR1-243ENST00000482050 KRTAP19-6Q3LI70 58 aa7.7□□□□□ -1.18
DDR1-243ENST00000482050 KRTAP3-2Q9BYR7 98 aa7.7□□□□□ -1.18
DDR1-243ENST00000482050 CCDC179H3BU77 68 aa7.69□□□□□ -1.18
DDR1-243ENST00000482050 COA5Q86WW8 74 aa7.68□□□□□ -1.18
DDR1-243ENST00000482050 FCGBPQ9Y6R7 5405 aaPredicted RBP7.63□□□□□ -1.19
DDR1-243ENST00000482050 R4GN34 69 aa7.63□□□□□ -1.19
DDR1-243ENST00000482050 M0QZ58 72 aa7.61□□□□□ -1.19
DDR1-243ENST00000482050 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.52□□□□□ -1.21
DDR1-243ENST00000482050 LINC01554Q52M75 96 aa7.52□□□□□ -1.21
DDR1-243ENST00000482050 A6NN06 94 aa7.51□□□□□ -1.21
DDR1-243ENST00000482050 KRTAP10-5P60370 271 aa7.45□□□□□ -1.22
DDR1-243ENST00000482050 PLAC4Q8WY50 150 aa7.44□□□□□ -1.22
DDR1-243ENST00000482050 ATP5EP56381 51 aaPredicted RBP7.42□□□□□ -1.22
DDR1-243ENST00000482050 SEC61GP60059 68 aa7.41□□□□□ -1.22
DDR1-243ENST00000482050 SERP1Q9Y6X1 66 aa7.39□□□□□ -1.23
DDR1-243ENST00000482050 TMEM258P61165 79 aa7.36□□□□□ -1.23
DDR1-243ENST00000482050 KRTAP13-4Q3LI77 160 aa7.36□□□□□ -1.23
DDR1-243ENST00000482050 KRTAP9-7A8MTY7 169 aa7.34□□□□□ -1.23
DDR1-243ENST00000482050 MT1XP80297 61 aa7.3□□□□□ -1.24
DDR1-243ENST00000482050 MACF1Q9UPN3 7388 aaKnown RBP7.29□□□□□ -1.24
DDR1-243ENST00000482050 PRO2289Q9P1D8 64 aa7.28□□□□□ -1.24
DDR1-243ENST00000482050 A0A1B0GU69 56 aa7.27□□□□□ -1.25
DDR1-243ENST00000482050 A0A1B0GU33 70 aa7.26□□□□□ -1.25
DDR1-243ENST00000482050 SPATA8Q6RVD6 105 aa7.24□□□□□ -1.25
DDR1-243ENST00000482050 A0A0D9SG42 100 aa7.21□□□□□ -1.26
DDR1-243ENST00000482050 SYNE2Q8WXH0 6885 aaKnown RBP7.16□□□□□ -1.26
DDR1-243ENST00000482050 LINC01558Q9Y6Z2 57 aa7.13□□□□□ -1.27
DDR1-243ENST00000482050 PRR15LQ9BU68 103 aa7.12□□□□□ -1.27
DDR1-243ENST00000482050 KRTAP6-3Q3LI67 103 aa7.11□□□□□ -1.27
DDR1-243ENST00000482050 CAMK2N1Q7Z7J9 78 aa7.09□□□□□ -1.27
DDR1-243ENST00000482050 PCP4P48539 62 aa7.07□□□□□ -1.28
DDR1-243ENST00000482050 SPINT4Q6UDR6 99 aa7.06□□□□□ -1.28
DDR1-243ENST00000482050 A8MU10 97 aa7.04□□□□□ -1.28
DDR1-243ENST00000482050 SMIM26A0A096LP01 95 aa7.03□□□□□ -1.28
DDR1-243ENST00000482050 KRTAP12-1P59990 96 aa7.02□□□□□ -1.29
DDR1-243ENST00000482050 KRTAP12-2P59991 146 aa7.02□□□□□ -1.29
DDR1-243ENST00000482050 KRTAP10-7P60409 375 aaPredicted RBP7□□□□□ -1.29
DDR1-243ENST00000482050 KMT2DO14686 5537 aa6.94□□□□□ -1.3
DDR1-243ENST00000482050 KRTAP4-8A0A0G2JLE6 195 aa6.91□□□□□ -1.3
DDR1-243ENST00000482050 KRTAP10-12P60413 245 aa6.91□□□□□ -1.3
DDR1-243ENST00000482050 KRTAP4-8Q9BYQ9 185 aa6.91□□□□□ -1.3
DDR1-243ENST00000482050 KRTAP5-9P26371 169 aa6.9□□□□□ -1.3
DDR1-243ENST00000482050 KRTAP8-1Q8IUC2 63 aa6.9□□□□□ -1.3
DDR1-243ENST00000482050 UQCR11O14957 56 aa6.89□□□□□ -1.31
DDR1-243ENST00000482050 PSPHP1O15172 72 aa6.88□□□□□ -1.31
DDR1-243ENST00000482050 V9GYY9 64 aa6.88□□□□□ -1.31
DDR1-243ENST00000482050 Q1T7F1 81 aa6.86□□□□□ -1.31
DDR1-243ENST00000482050 SPRR2FQ96RM1 72 aa6.83□□□□□ -1.32
DDR1-243ENST00000482050 MIR22HGQ0VDD5 57 aa6.79□□□□□ -1.32
DDR1-243ENST00000482050 MUC12Q9UKN1 5478 aa6.77□□□□□ -1.32
DDR1-243ENST00000482050 RPS28P62857 69 aaKnown RBP6.77□□□□□ -1.33
DDR1-243ENST00000482050 NEBP20929 6669 aa6.69□□□□□ -1.34
DDR1-243ENST00000482050 C10orf95Q9H7T3 257 aa6.69□□□□□ -1.34
DDR1-243ENST00000482050 SPRR2EP22531 72 aa6.66□□□□□ -1.34
DDR1-243ENST00000482050 SPRR2BP35325 72 aa6.66□□□□□ -1.34
DDR1-243ENST00000482050 SPRR2AP35326 72 aa6.66□□□□□ -1.34
DDR1-243ENST00000482050 MDN1Q9NU22 5596 aa6.65□□□□□ -1.34
DDR1-243ENST00000482050 A6NED7 52 aa6.65□□□□□ -1.34
DDR1-243ENST00000482050 TNP1P09430 55 aa6.59□□□□□ -1.35
DDR1-243ENST00000482050 LCE1AQ5T7P2 110 aa6.59□□□□□ -1.35
DDR1-243ENST00000482050 K7ERS5 55 aa6.58□□□□□ -1.36
DDR1-243ENST00000482050 KRTAP19-7Q3SYF9 63 aa6.51□□□□□ -1.37
DDR1-243ENST00000482050 LCE3AQ5TA76 89 aa6.48□□□□□ -1.37
DDR1-243ENST00000482050 KRTAP20-1Q3LI63 56 aa6.46□□□□□ -1.38
DDR1-243ENST00000482050 KRTAP19-5Q3LI72 72 aa6.46□□□□□ -1.38
DDR1-243ENST00000482050 MT1EP04732 61 aa6.45□□□□□ -1.38
DDR1-243ENST00000482050 SPRR2DP22532 72 aa6.43□□□□□ -1.38
DDR1-243ENST00000482050 CDC42SE1Q9NRR8 79 aa6.37□□□□□ -1.39
DDR1-243ENST00000482050 KRTAP2-3P0C7H8 128 aa6.36□□□□□ -1.39
DDR1-243ENST00000482050 KRTAP25-1Q3LHN0 102 aa6.36□□□□□ -1.39
DDR1-243ENST00000482050 KRTAP2-4Q9BYR9 128 aa6.36□□□□□ -1.39
DDR1-243ENST00000482050 KRTAP19-3Q7Z4W3 81 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms