RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 WFDC13Q8IUB5 93 aa2.99□□□□□ -1.93
VPS50-215ENST00000480943 PRR15Q8IV56 129 aa2.99□□□□□ -1.93
VPS50-215ENST00000480943 SSPOA2VEC9 5147 aa2.99□□□□□ -1.93
VPS50-215ENST00000480943 A0A1W2PPM0 123 aa2.98□□□□□ -1.93
VPS50-215ENST00000480943 H3BT86 120 aa2.98□□□□□ -1.93
VPS50-215ENST00000480943 MT1FP04733 61 aa2.98□□□□□ -1.93
VPS50-215ENST00000480943 USH2AO75445 5202 aa2.97□□□□□ -1.93
VPS50-215ENST00000480943 LOC105371267A0A1B0GV96 52 aa2.97□□□□□ -1.93
VPS50-215ENST00000480943 K7EQZ3 153 aa2.97□□□□□ -1.93
VPS50-215ENST00000480943 TMEM254Q8TBM7 123 aa2.97□□□□□ -1.93
VPS50-215ENST00000480943 MRPL34Q9BQ48 92 aaKnown RBP2.97□□□□□ -1.93
VPS50-215ENST00000480943 hDV103S1A0JD37 113 aa2.96□□□□□ -1.94
VPS50-215ENST00000480943 NDUFS5O43920 106 aa2.96□□□□□ -1.94
VPS50-215ENST00000480943 KRTAP10-10P60014 251 aa2.96□□□□□ -1.94
VPS50-215ENST00000480943 BPY2O14599 106 aa2.95□□□□□ -1.94
VPS50-215ENST00000480943 SPCS1Q9Y6A9 102 aa2.94□□□□□ -1.94
VPS50-215ENST00000480943 Q8N9L7 120 aa2.93□□□□□ -1.94
VPS50-215ENST00000480943 C7orf65Q6ZTY9 151 aa2.92□□□□□ -1.94
VPS50-215ENST00000480943 HCG22E2RYF7 251 aa2.91□□□□□ -1.94
VPS50-215ENST00000480943 C5orf47Q569G3 176 aa2.91□□□□□ -1.94
VPS50-215ENST00000480943 Q5W150 140 aa2.91□□□□□ -1.94
VPS50-215ENST00000480943 CASC2Q6XLA1 102 aa2.91□□□□□ -1.94
VPS50-215ENST00000480943 H1FX-AS1Q4G0G2 97 aa2.9□□□□□ -1.95
VPS50-215ENST00000480943 COL5A1-AS1Q5SY13 56 aa2.9□□□□□ -1.95
VPS50-215ENST00000480943 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.95
VPS50-215ENST00000480943 V9GYY9 64 aa2.9□□□□□ -1.95
VPS50-215ENST00000480943 K7EP34 96 aa2.89□□□□□ -1.95
VPS50-215ENST00000480943 UBL5Q9BZL1 73 aa2.89□□□□□ -1.95
VPS50-215ENST00000480943 LINC00846Q9NV44 126 aa2.88□□□□□ -1.95
VPS50-215ENST00000480943 FCGBPQ9Y6R7 5405 aaPredicted RBP2.87□□□□□ -1.95
VPS50-215ENST00000480943 CXCL6P80162 114 aa2.87□□□□□ -1.95
VPS50-215ENST00000480943 C4orf26Q17RF5 130 aa2.87□□□□□ -1.95
VPS50-215ENST00000480943 GTF2H5Q6ZYL4 71 aa2.84□□□□□ -1.95
VPS50-215ENST00000480943 KRTAP19-6Q3LI70 58 aa2.83□□□□□ -1.96
VPS50-215ENST00000480943 ETDBQ3ZM63 59 aa2.83□□□□□ -1.96
VPS50-215ENST00000480943 F8W1H4 67 aa2.81□□□□□ -1.96
VPS50-215ENST00000480943 C1orf64Q8NEQ6 169 aa2.81□□□□□ -1.96
VPS50-215ENST00000480943 S4R3F8 94 aa2.81□□□□□ -1.96
VPS50-215ENST00000480943 MACF1Q9UPN3 7388 aaKnown RBP2.81□□□□□ -1.96
VPS50-215ENST00000480943 FAM236AA0A1B0GUQ0 79 aa2.8□□□□□ -1.96
VPS50-215ENST00000480943 FAM236BA0A1B0GV22 79 aa2.8□□□□□ -1.96
VPS50-215ENST00000480943 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
VPS50-215ENST00000480943 TP53AIP1Q9HCN2 124 aa2.8□□□□□ -1.96
VPS50-215ENST00000480943 LCA10Q71F78 164 aa2.79□□□□□ -1.96
VPS50-215ENST00000480943 CSAG1Q6PB30 78 aa2.77□□□□□ -1.97
VPS50-215ENST00000480943 PP632Q6XCG6 107 aa2.77□□□□□ -1.97
VPS50-215ENST00000480943 TRAV22A0A0B4J277 110 aa2.76□□□□□ -1.97
VPS50-215ENST00000480943 LOC101927531A0A1B0GV80 90 aa2.75□□□□□ -1.97
VPS50-215ENST00000480943 ACYP1P07311 99 aa2.75□□□□□ -1.97
VPS50-215ENST00000480943 CYP4F30PQ9H0H9 118 aa2.75□□□□□ -1.97
VPS50-215ENST00000480943 SYNE2Q8WXH0 6885 aaKnown RBP2.74□□□□□ -1.97
VPS50-215ENST00000480943 HIST1H4AP62805 103 aaKnown RBP2.74□□□□□ -1.97
VPS50-215ENST00000480943 A0A087WVE0 104 aa2.73□□□□□ -1.97
VPS50-215ENST00000480943 FAM240AA0A1B0GVK7 77 aa2.73□□□□□ -1.97
VPS50-215ENST00000480943 MT1BP07438 61 aa2.73□□□□□ -1.97
VPS50-215ENST00000480943 KLKP1Q107X0 134 aa2.73□□□□□ -1.97
VPS50-215ENST00000480943 ATP5EP2Q5VTU8 51 aa2.73□□□□□ -1.97
VPS50-215ENST00000480943 Q5VV11 94 aa2.73□□□□□ -1.97
VPS50-215ENST00000480943 H0Y9P7 68 aa2.72□□□□□ -1.97
VPS50-215ENST00000480943 SPRR2GQ9BYE4 73 aa2.72□□□□□ -1.97
VPS50-215ENST00000480943 A6NN06 94 aa2.71□□□□□ -1.98
VPS50-215ENST00000480943 UQCRQO14949 82 aa2.71□□□□□ -1.98
VPS50-215ENST00000480943 KRTAP19-8Q3LI54 63 aa2.71□□□□□ -1.98
VPS50-215ENST00000480943 ATOX1O00244 68 aa2.7□□□□□ -1.98
VPS50-215ENST00000480943 KRTAP6-3Q3LI67 103 aa2.7□□□□□ -1.98
VPS50-215ENST00000480943 LINC00643Q86TS7 51 aa2.69□□□□□ -1.98
VPS50-215ENST00000480943 A0A1B0GV90 55 aa2.67□□□□□ -1.98
VPS50-215ENST00000480943 NDUFC1O43677 76 aa2.67□□□□□ -1.98
VPS50-215ENST00000480943 LINC00208Q96KT6 92 aa2.67□□□□□ -1.98
VPS50-215ENST00000480943 IMUPQ9GZP8 106 aa2.67□□□□□ -1.98
VPS50-215ENST00000480943 CRIPTQ9P021 101 aa2.66□□□□□ -1.98
VPS50-215ENST00000480943 A8MUN3 132 aa2.65□□□□□ -1.99
VPS50-215ENST00000480943 MP68P56378 58 aa2.65□□□□□ -1.99
VPS50-215ENST00000480943 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
VPS50-215ENST00000480943 H0YAA0 97 aa2.63□□□□□ -1.99
VPS50-215ENST00000480943 ADM2Q7Z4H4 148 aa2.63□□□□□ -1.99
VPS50-215ENST00000480943 PSPHP1O15172 72 aa2.62□□□□□ -1.99
VPS50-215ENST00000480943 J3QR89 54 aa2.6□□□□□ -1.99
VPS50-215ENST00000480943 PRO0628Q9UI54 55 aa2.6□□□□□ -1.99
VPS50-215ENST00000480943 H3BPC8 53 aa2.59□□□□□ -1.99
VPS50-215ENST00000480943 SCGB1A1P11684 91 aa2.59□□□□□ -1.99
VPS50-215ENST00000480943 MUC12Q9UKN1 5478 aa2.58□□□□□ -2
VPS50-215ENST00000480943 DMAC1Q96GE9 116 aa2.58□□□□□ -2
VPS50-215ENST00000480943 R4GN34 69 aa2.58□□□□□ -2
VPS50-215ENST00000480943 SMIM26A0A096LP01 95 aa2.57□□□□□ -2
VPS50-215ENST00000480943 M0QZ58 72 aa2.57□□□□□ -2
VPS50-215ENST00000480943 P0C880 135 aa2.57□□□□□ -2
VPS50-215ENST00000480943 CAMK2N1Q7Z7J9 78 aa2.57□□□□□ -2
VPS50-215ENST00000480943 NEBP20929 6669 aa2.57□□□□□ -2
VPS50-215ENST00000480943 C20orf197Q8N268 126 aa2.56□□□□□ -2
VPS50-215ENST00000480943 PLAC4Q8WY50 150 aa2.56□□□□□ -2
VPS50-215ENST00000480943 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
VPS50-215ENST00000480943 MT1XP80297 61 aa2.55□□□□□ -2
VPS50-215ENST00000480943 PRO2289Q9P1D8 64 aa2.55□□□□□ -2
VPS50-215ENST00000480943 MT-ATP8P03928 68 aa2.53□□□□□ -2
VPS50-215ENST00000480943 KRTAP20-1Q3LI63 56 aa2.53□□□□□ -2
VPS50-215ENST00000480943 LINC01554Q52M75 96 aa2.53□□□□□ -2
VPS50-215ENST00000480943 KMT2DO14686 5537 aa2.52□□□□□ -2.01
VPS50-215ENST00000480943 TRAV7A0A075B6U4 112 aa2.52□□□□□ -2.01
VPS50-215ENST00000480943 ACYP2P14621 99 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms