RNA–Protein interactions for RNA: ENST00000480609.1

COL4A2-206, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-206ENST00000480609 LCE2AQ5TA79 106 aaPredicted RBP6.42□□□□□ -1.38
COL4A2-206ENST00000480609 S4R3F8 94 aa6.42□□□□□ -1.38
COL4A2-206ENST00000480609 KRTAP3-3Q9BYR6 98 aa6.41□□□□□ -1.38
COL4A2-206ENST00000480609 LCA10Q71F78 164 aa6.4□□□□□ -1.38
COL4A2-206ENST00000480609 COA5Q86WW8 74 aa6.37□□□□□ -1.39
COL4A2-206ENST00000480609 CSAG1Q6PB30 78 aa6.35□□□□□ -1.39
COL4A2-206ENST00000480609 SPTSSBQ8NFR3 76 aa6.33□□□□□ -1.4
COL4A2-206ENST00000480609 SERP1Q9Y6X1 66 aa6.32□□□□□ -1.4
COL4A2-206ENST00000480609 CHKB-CPT1BH3BT56 60 aa6.31□□□□□ -1.4
COL4A2-206ENST00000480609 H0YAA0 97 aa6.29□□□□□ -1.4
COL4A2-206ENST00000480609 RPS28P62857 69 aaKnown RBP6.27□□□□□ -1.41
COL4A2-206ENST00000480609 M0R2T5 61 aa6.25□□□□□ -1.41
COL4A2-206ENST00000480609 LORP23490 312 aaPredicted RBP6.25□□□□□ -1.41
COL4A2-206ENST00000480609 KRTAP10-6P60371 365 aaPredicted RBP6.25□□□□□ -1.41
COL4A2-206ENST00000480609 KRTAP9-8Q9BYQ0 159 aa6.2□□□□□ -1.42
COL4A2-206ENST00000480609 MT2AP02795 61 aa6.13□□□□□ -1.43
COL4A2-206ENST00000480609 KRTAP3-2Q9BYR7 98 aa6.13□□□□□ -1.43
COL4A2-206ENST00000480609 SMIM26A0A096LP01 95 aa6.12□□□□□ -1.43
COL4A2-206ENST00000480609 LINC01558Q9Y6Z2 57 aa6.12□□□□□ -1.43
COL4A2-206ENST00000480609 V9GYY9 64 aa6.09□□□□□ -1.43
COL4A2-206ENST00000480609 MT1FP04733 61 aa6.08□□□□□ -1.44
COL4A2-206ENST00000480609 Q1T7F1 81 aa6.08□□□□□ -1.44
COL4A2-206ENST00000480609 ADM2Q7Z4H4 148 aa6.08□□□□□ -1.44
COL4A2-206ENST00000480609 CRIPTQ9P021 101 aa6.08□□□□□ -1.44
COL4A2-206ENST00000480609 SEC61GP60059 68 aa6.05□□□□□ -1.44
COL4A2-206ENST00000480609 P0C880 135 aa6.03□□□□□ -1.44
COL4A2-206ENST00000480609 KRTAP10-10P60014 251 aa6.03□□□□□ -1.44
COL4A2-206ENST00000480609 A0A1B0GU69 56 aa6.02□□□□□ -1.45
COL4A2-206ENST00000480609 PRR15LQ9BU68 103 aa6.01□□□□□ -1.45
COL4A2-206ENST00000480609 KRTAP9-3Q9BYQ3 159 aa6□□□□□ -1.45
COL4A2-206ENST00000480609 SPRR2GQ9BYE4 73 aa5.99□□□□□ -1.45
COL4A2-206ENST00000480609 M0QZ58 72 aa5.97□□□□□ -1.45
COL4A2-206ENST00000480609 KRTAP19-1Q8IUB9 90 aa5.94□□□□□ -1.46
COL4A2-206ENST00000480609 LCE2DQ5TA82 110 aaPredicted RBP5.93□□□□□ -1.46
COL4A2-206ENST00000480609 A0A1B0GU33 70 aa5.92□□□□□ -1.46
COL4A2-206ENST00000480609 Q5VV11 94 aa5.92□□□□□ -1.46
COL4A2-206ENST00000480609 R4GN34 69 aa5.91□□□□□ -1.46
COL4A2-206ENST00000480609 KRTAP19-8Q3LI54 63 aa5.87□□□□□ -1.47
COL4A2-206ENST00000480609 UQCR11O14957 56 aa5.85□□□□□ -1.47
COL4A2-206ENST00000480609 KRTAP13-4Q3LI77 160 aa5.85□□□□□ -1.47
COL4A2-206ENST00000480609 PSPHP1O15172 72 aa5.84□□□□□ -1.47
COL4A2-206ENST00000480609 A6NN06 94 aa5.83□□□□□ -1.48
COL4A2-206ENST00000480609 LCE2BO14633 110 aa5.82□□□□□ -1.48
COL4A2-206ENST00000480609 SPATA8Q6RVD6 105 aa5.76□□□□□ -1.49
COL4A2-206ENST00000480609 MT1BP07438 61 aa5.75□□□□□ -1.49
COL4A2-206ENST00000480609 USH2AO75445 5202 aa5.72□□□□□ -1.49
COL4A2-206ENST00000480609 MIR22HGQ0VDD5 57 aa5.72□□□□□ -1.49
COL4A2-206ENST00000480609 A6NED7 52 aa5.7□□□□□ -1.5
COL4A2-206ENST00000480609 KRTAP9-2Q9BYQ4 174 aa5.7□□□□□ -1.5
COL4A2-206ENST00000480609 LINC01554Q52M75 96 aa5.68□□□□□ -1.5
COL4A2-206ENST00000480609 A8MU10 97 aa5.65□□□□□ -1.5
COL4A2-206ENST00000480609 KRTAP12-1P59990 96 aa5.65□□□□□ -1.5
COL4A2-206ENST00000480609 CDC42SE1Q9NRR8 79 aa5.65□□□□□ -1.5
COL4A2-206ENST00000480609 PLAC4Q8WY50 150 aa5.64□□□□□ -1.51
COL4A2-206ENST00000480609 A0A0D9SG42 100 aa5.63□□□□□ -1.51
COL4A2-206ENST00000480609 SSPOA2VEC9 5147 aa5.61□□□□□ -1.51
COL4A2-206ENST00000480609 KRTAP19-6Q3LI70 58 aa5.59□□□□□ -1.51
COL4A2-206ENST00000480609 KRTAP12-2P59991 146 aa5.58□□□□□ -1.52
COL4A2-206ENST00000480609 SPINT4Q6UDR6 99 aa5.54□□□□□ -1.52
COL4A2-206ENST00000480609 K7ERS5 55 aa5.52□□□□□ -1.53
COL4A2-206ENST00000480609 KRTAP10-5P60370 271 aa5.52□□□□□ -1.53
COL4A2-206ENST00000480609 MT1XP80297 61 aa5.51□□□□□ -1.53
COL4A2-206ENST00000480609 PRO2289Q9P1D8 64 aa5.49□□□□□ -1.53
COL4A2-206ENST00000480609 CRCT1Q9UGL9 99 aa5.49□□□□□ -1.53
COL4A2-206ENST00000480609 CAMK2N1Q7Z7J9 78 aa5.47□□□□□ -1.53
COL4A2-206ENST00000480609 FSIP2Q5CZC0 6907 aa5.45□□□□□ -1.54
COL4A2-206ENST00000480609 BRK1Q8WUW1 75 aa5.45□□□□□ -1.54
COL4A2-206ENST00000480609 FCGBPQ9Y6R7 5405 aaPredicted RBP5.38□□□□□ -1.55
COL4A2-206ENST00000480609 C10orf95Q9H7T3 257 aa5.35□□□□□ -1.55
COL4A2-206ENST00000480609 KRTAP9-6A0A140TA67 174 aa5.34□□□□□ -1.55
COL4A2-206ENST00000480609 PRO0628Q9UI54 55 aa5.32□□□□□ -1.56
COL4A2-206ENST00000480609 KRTAP10-12P60413 245 aa5.28□□□□□ -1.56
COL4A2-206ENST00000480609 ROMO1P60602 79 aa5.26□□□□□ -1.57
COL4A2-206ENST00000480609 TNP1P09430 55 aa5.24□□□□□ -1.57
COL4A2-206ENST00000480609 KRTAP25-1Q3LHN0 102 aa5.24□□□□□ -1.57
COL4A2-206ENST00000480609 KRTAP10-7P60409 375 aaPredicted RBP5.22□□□□□ -1.57
COL4A2-206ENST00000480609 PMAIP1Q13794 54 aa5.18□□□□□ -1.58
COL4A2-206ENST00000480609 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
COL4A2-206ENST00000480609 MACF1Q9UPN3 7388 aaKnown RBP5.08□□□□□ -1.6
COL4A2-206ENST00000480609 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.08□□□□□ -1.6
COL4A2-206ENST00000480609 KMT2DO14686 5537 aa5.05□□□□□ -1.6
COL4A2-206ENST00000480609 KRTAP4-8A0A0G2JLE6 195 aa5.04□□□□□ -1.6
COL4A2-206ENST00000480609 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
COL4A2-206ENST00000480609 KRTAP4-8Q9BYQ9 185 aa5.04□□□□□ -1.6
COL4A2-206ENST00000480609 LCE3AQ5TA76 89 aa5.01□□□□□ -1.61
COL4A2-206ENST00000480609 KRTAP8-1Q8IUC2 63 aa5.01□□□□□ -1.61
COL4A2-206ENST00000480609 KRTAP5-9P26371 169 aa5□□□□□ -1.61
COL4A2-206ENST00000480609 KRTAP6-3Q3LI67 103 aa4.98□□□□□ -1.61
COL4A2-206ENST00000480609 KTN1-AS1Q86SY8 53 aa4.95□□□□□ -1.62
COL4A2-206ENST00000480609 KRTAP19-7Q3SYF9 63 aa4.93□□□□□ -1.62
COL4A2-206ENST00000480609 SVIPQ8NHG7 77 aa4.93□□□□□ -1.62
COL4A2-206ENST00000480609 SYNE2Q8WXH0 6885 aaKnown RBP4.88□□□□□ -1.63
COL4A2-206ENST00000480609 KRTAP19-5Q3LI72 72 aa4.88□□□□□ -1.63
COL4A2-206ENST00000480609 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
COL4A2-206ENST00000480609 MT1EP04732 61 aa4.85□□□□□ -1.63
COL4A2-206ENST00000480609 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
COL4A2-206ENST00000480609 SPRR2FQ96RM1 72 aa4.83□□□□□ -1.64
COL4A2-206ENST00000480609 PRAC1Q96KF2 57 aa4.81□□□□□ -1.64
COL4A2-206ENST00000480609 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
COL4A2-206ENST00000480609 MUC12Q9UKN1 5478 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms