RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 IGKV2D-30A0A075B6S6 120 aa5.59□□□□□ -1.51
LINC00173-203ENST00000480237 FAM236DA0A1B0GTK5 79 aa5.59□□□□□ -1.51
LINC00173-203ENST00000480237 IGKV2-30P06310 120 aa5.59□□□□□ -1.51
LINC00173-203ENST00000480237 FAM236CP0DP71 79 aa5.59□□□□□ -1.51
LINC00173-203ENST00000480237 PCOTHQ58A44 107 aa5.59□□□□□ -1.51
LINC00173-203ENST00000480237 PCLOQ9Y6V0 5065 aa5.59□□□□□ -1.51
LINC00173-203ENST00000480237 SMIM26A0A096LP01 95 aa5.59□□□□□ -1.52
LINC00173-203ENST00000480237 ATP11AUNQ6ZP68 121 aa5.59□□□□□ -1.52
LINC00173-203ENST00000480237 LPAP08519 4548 aa5.57□□□□□ -1.52
LINC00173-203ENST00000480237 C7orf65Q6ZTY9 151 aa5.57□□□□□ -1.52
LINC00173-203ENST00000480237 CYP4F30PQ9H0H9 118 aa5.57□□□□□ -1.52
LINC00173-203ENST00000480237 ATP5EP56381 51 aaPredicted RBP5.55□□□□□ -1.52
LINC00173-203ENST00000480237 LRP2P98164 4655 aa5.54□□□□□ -1.52
LINC00173-203ENST00000480237 SPANXA2-OT1Q8N9U9 137 aa5.5□□□□□ -1.53
LINC00173-203ENST00000480237 HRES1P13985 223 aa5.49□□□□□ -1.53
LINC00173-203ENST00000480237 SPINK7P58062 85 aa5.49□□□□□ -1.53
LINC00173-203ENST00000480237 HERC1Q15751 4861 aa5.47□□□□□ -1.53
LINC00173-203ENST00000480237 SEC61BP60468 96 aaKnown RBP5.47□□□□□ -1.53
LINC00173-203ENST00000480237 V9GYY9 64 aa5.43□□□□□ -1.54
LINC00173-203ENST00000480237 MPLKIPQ8TAP9 179 aa5.42□□□□□ -1.54
LINC00173-203ENST00000480237 DMAC1Q96GE9 116 aa5.41□□□□□ -1.54
LINC00173-203ENST00000480237 MUC17Q685J3 4493 aa5.39□□□□□ -1.55
LINC00173-203ENST00000480237 SEC61GP60059 68 aa5.39□□□□□ -1.55
LINC00173-203ENST00000480237 HMCN2Q8NDA2 5059 aa5.39□□□□□ -1.55
LINC00173-203ENST00000480237 BRK1Q8WUW1 75 aa5.38□□□□□ -1.55
LINC00173-203ENST00000480237 ACYP2P14621 99 aa5.38□□□□□ -1.55
LINC00173-203ENST00000480237 A8MUN3 132 aa5.37□□□□□ -1.55
LINC00173-203ENST00000480237 COA5Q86WW8 74 aa5.37□□□□□ -1.55
LINC00173-203ENST00000480237 COX6B2Q6YFQ2 88 aa5.35□□□□□ -1.55
LINC00173-203ENST00000480237 CHKB-CPT1BH3BT56 60 aa5.33□□□□□ -1.56
LINC00173-203ENST00000480237 Q1T7F1 81 aa5.33□□□□□ -1.56
LINC00173-203ENST00000480237 RBM12B-AS1Q9P1G2 102 aa5.33□□□□□ -1.56
LINC00173-203ENST00000480237 PMAIP1Q13794 54 aa5.3□□□□□ -1.56
LINC00173-203ENST00000480237 KRTAP5-3Q6L8H2 238 aa5.3□□□□□ -1.56
LINC00173-203ENST00000480237 KRTAP4-1Q9BYQ7 146 aa5.29□□□□□ -1.56
LINC00173-203ENST00000480237 A0A0A0MQY5 61 aa5.29□□□□□ -1.56
LINC00173-203ENST00000480237 H1FX-AS1Q4G0G2 97 aa5.24□□□□□ -1.57
LINC00173-203ENST00000480237 S4R3F8 94 aa5.23□□□□□ -1.57
LINC00173-203ENST00000480237 SPTSSBQ8NFR3 76 aa5.22□□□□□ -1.57
LINC00173-203ENST00000480237 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
LINC00173-203ENST00000480237 LCA10Q71F78 164 aa5.18□□□□□ -1.58
LINC00173-203ENST00000480237 PSPHP1O15172 72 aa5.14□□□□□ -1.59
LINC00173-203ENST00000480237 KRTAP19-2Q3LHN2 52 aa5.12□□□□□ -1.59
LINC00173-203ENST00000480237 LINC01558Q9Y6Z2 57 aa5.12□□□□□ -1.59
LINC00173-203ENST00000480237 FLGP20930 4061 aaPredicted RBP5.12□□□□□ -1.59
LINC00173-203ENST00000480237 Q5VV11 94 aa5.12□□□□□ -1.59
LINC00173-203ENST00000480237 RNF213Q63HN8 5207 aa5.11□□□□□ -1.59
LINC00173-203ENST00000480237 PRR15LQ9BU68 103 aa5.11□□□□□ -1.59
LINC00173-203ENST00000480237 KTN1-AS1Q86SY8 53 aa5.1□□□□□ -1.59
LINC00173-203ENST00000480237 UBR4Q5T4S7 5183 aa5.1□□□□□ -1.59
LINC00173-203ENST00000480237 MUC2Q02817 5179 aa5.09□□□□□ -1.59
LINC00173-203ENST00000480237 KRTAP9-8Q9BYQ0 159 aa5.09□□□□□ -1.59
LINC00173-203ENST00000480237 A0A1B0GU69 56 aa5.08□□□□□ -1.6
LINC00173-203ENST00000480237 CSAG1Q6PB30 78 aa5.08□□□□□ -1.6
LINC00173-203ENST00000480237 A6NN06 94 aa5.02□□□□□ -1.61
LINC00173-203ENST00000480237 CDC42SE1Q9NRR8 79 aa5.02□□□□□ -1.61
LINC00173-203ENST00000480237 A6NED7 52 aa4.99□□□□□ -1.61
LINC00173-203ENST00000480237 A8MU10 97 aa4.98□□□□□ -1.61
LINC00173-203ENST00000480237 M0R2T5 61 aa4.97□□□□□ -1.61
LINC00173-203ENST00000480237 ADM2Q7Z4H4 148 aa4.97□□□□□ -1.61
LINC00173-203ENST00000480237 FAT4Q6V0I7 4981 aa4.96□□□□□ -1.62
LINC00173-203ENST00000480237 MT1HP80294 61 aa4.95□□□□□ -1.62
LINC00173-203ENST00000480237 H0YAA0 97 aa4.94□□□□□ -1.62
LINC00173-203ENST00000480237 P0C880 135 aa4.92□□□□□ -1.62
LINC00173-203ENST00000480237 KRTAP10-6P60371 365 aaPredicted RBP4.92□□□□□ -1.62
LINC00173-203ENST00000480237 A0A1B0GU33 70 aa4.91□□□□□ -1.62
LINC00173-203ENST00000480237 UQCR11O14957 56 aa4.91□□□□□ -1.62
LINC00173-203ENST00000480237 MIR22HGQ0VDD5 57 aa4.86□□□□□ -1.63
LINC00173-203ENST00000480237 SPATA8Q6RVD6 105 aa4.83□□□□□ -1.64
LINC00173-203ENST00000480237 M0QZ58 72 aa4.81□□□□□ -1.64
LINC00173-203ENST00000480237 KRTAP13-4Q3LI77 160 aa4.81□□□□□ -1.64
LINC00173-203ENST00000480237 KRTAP2-2Q9BYT5 123 aa4.81□□□□□ -1.64
LINC00173-203ENST00000480237 R4GN34 69 aa4.81□□□□□ -1.64
LINC00173-203ENST00000480237 A0A0D9SG42 100 aa4.76□□□□□ -1.65
LINC00173-203ENST00000480237 MT2AP02795 61 aa4.76□□□□□ -1.65
LINC00173-203ENST00000480237 LINC01554Q52M75 96 aa4.76□□□□□ -1.65
LINC00173-203ENST00000480237 CRIPTQ9P021 101 aa4.76□□□□□ -1.65
LINC00173-203ENST00000480237 KRTAP10-10P60014 251 aa4.74□□□□□ -1.65
LINC00173-203ENST00000480237 MT1FP04733 61 aa4.73□□□□□ -1.65
LINC00173-203ENST00000480237 PRAC1Q96KF2 57 aa4.7□□□□□ -1.66
LINC00173-203ENST00000480237 MT3P25713 68 aa4.7□□□□□ -1.66
LINC00173-203ENST00000480237 K7ERS5 55 aa4.68□□□□□ -1.66
LINC00173-203ENST00000480237 SPINT4Q6UDR6 99 aa4.65□□□□□ -1.67
LINC00173-203ENST00000480237 SPRR2GQ9BYE4 73 aa4.64□□□□□ -1.67
LINC00173-203ENST00000480237 KRTAP12-1P59990 96 aa4.63□□□□□ -1.67
LINC00173-203ENST00000480237 KRTAP12-2P59991 146 aa4.61□□□□□ -1.67
LINC00173-203ENST00000480237 PLAC4Q8WY50 150 aa4.53□□□□□ -1.68
LINC00173-203ENST00000480237 KRTAP19-8Q3LI54 63 aa4.53□□□□□ -1.69
LINC00173-203ENST00000480237 CAMK2N1Q7Z7J9 78 aa4.52□□□□□ -1.69
LINC00173-203ENST00000480237 KRTAP25-1Q3LHN0 102 aa4.49□□□□□ -1.69
LINC00173-203ENST00000480237 MT1BP07438 61 aa4.46□□□□□ -1.7
LINC00173-203ENST00000480237 ROMO1P60602 79 aa4.45□□□□□ -1.7
LINC00173-203ENST00000480237 KRTAP10-7P60409 375 aaPredicted RBP4.44□□□□□ -1.7
LINC00173-203ENST00000480237 C10orf95Q9H7T3 257 aa4.37□□□□□ -1.71
LINC00173-203ENST00000480237 MT1XP80297 61 aa4.32□□□□□ -1.72
LINC00173-203ENST00000480237 PRO2289Q9P1D8 64 aa4.31□□□□□ -1.72
LINC00173-203ENST00000480237 USH2AO75445 5202 aa4.31□□□□□ -1.72
LINC00173-203ENST00000480237 KRTAP10-5P60370 271 aa4.3□□□□□ -1.72
LINC00173-203ENST00000480237 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
LINC00173-203ENST00000480237 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms