RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 MT1FP04733 61 aa7.22□□□□□ -1.25
COL16A1-211ENST00000479100 CSAG1Q6PB30 78 aa7.22□□□□□ -1.25
COL16A1-211ENST00000479100 A8MUN3 132 aa7.21□□□□□ -1.26
COL16A1-211ENST00000479100 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.2□□□□□ -1.26
COL16A1-211ENST00000479100 SERP2Q8N6R1 65 aa7.2□□□□□ -1.26
COL16A1-211ENST00000479100 SNURFQ9Y675 71 aa7.18□□□□□ -1.26
COL16A1-211ENST00000479100 FCGBPQ9Y6R7 5405 aaPredicted RBP7.18□□□□□ -1.26
COL16A1-211ENST00000479100 LCE2BO14633 110 aa7.16□□□□□ -1.26
COL16A1-211ENST00000479100 KRTAP9-3Q9BYQ3 159 aa7.16□□□□□ -1.26
COL16A1-211ENST00000479100 C20orf197Q8N268 126 aa7.15□□□□□ -1.26
COL16A1-211ENST00000479100 KRTAP3-3Q9BYR6 98 aa7.15□□□□□ -1.26
COL16A1-211ENST00000479100 KRTAP9-7A8MTY7 169 aa7.14□□□□□ -1.27
COL16A1-211ENST00000479100 NDUFC1O43677 76 aa7.14□□□□□ -1.27
COL16A1-211ENST00000479100 DMAC1Q96GE9 116 aa7.11□□□□□ -1.27
COL16A1-211ENST00000479100 KRTAP19-1Q8IUB9 90 aa7.08□□□□□ -1.28
COL16A1-211ENST00000479100 COX7CP15954 63 aa7.06□□□□□ -1.28
COL16A1-211ENST00000479100 ACYP2P14621 99 aa7.04□□□□□ -1.28
COL16A1-211ENST00000479100 MACF1Q9UPN3 7388 aaKnown RBP7.03□□□□□ -1.28
COL16A1-211ENST00000479100 ANAPC13Q9BS18 74 aa7.01□□□□□ -1.29
COL16A1-211ENST00000479100 SYNE2Q8WXH0 6885 aaKnown RBP6.99□□□□□ -1.29
COL16A1-211ENST00000479100 SPANXA2-OT1Q8N9U9 137 aa6.98□□□□□ -1.29
COL16A1-211ENST00000479100 CHKB-CPT1BH3BT56 60 aa6.95□□□□□ -1.3
COL16A1-211ENST00000479100 KRTAP19-6Q3LI70 58 aa6.93□□□□□ -1.3
COL16A1-211ENST00000479100 ADM2Q7Z4H4 148 aa6.93□□□□□ -1.3
COL16A1-211ENST00000479100 H0YAA0 97 aa6.92□□□□□ -1.3
COL16A1-211ENST00000479100 SPTSSBQ8NFR3 76 aa6.9□□□□□ -1.3
COL16A1-211ENST00000479100 CYSTM1Q9H1C7 97 aa6.9□□□□□ -1.3
COL16A1-211ENST00000479100 H7BZZ5 65 aa6.87□□□□□ -1.31
COL16A1-211ENST00000479100 CCDC179H3BU77 68 aa6.85□□□□□ -1.31
COL16A1-211ENST00000479100 CRIPTQ9P021 101 aa6.85□□□□□ -1.31
COL16A1-211ENST00000479100 COA5Q86WW8 74 aa6.82□□□□□ -1.32
COL16A1-211ENST00000479100 SPRR2GQ9BYE4 73 aa6.82□□□□□ -1.32
COL16A1-211ENST00000479100 P0C880 135 aa6.8□□□□□ -1.32
COL16A1-211ENST00000479100 Q5VV11 94 aa6.76□□□□□ -1.33
COL16A1-211ENST00000479100 KRTAP3-2Q9BYR7 98 aa6.76□□□□□ -1.33
COL16A1-211ENST00000479100 KRTAP19-8Q3LI54 63 aa6.73□□□□□ -1.33
COL16A1-211ENST00000479100 R4GN34 69 aa6.73□□□□□ -1.33
COL16A1-211ENST00000479100 MT1BP07438 61 aa6.7□□□□□ -1.34
COL16A1-211ENST00000479100 M0QZ58 72 aa6.69□□□□□ -1.34
COL16A1-211ENST00000479100 KRTAP6-3Q3LI67 103 aa6.68□□□□□ -1.34
COL16A1-211ENST00000479100 ATP5EP56381 51 aaPredicted RBP6.65□□□□□ -1.34
COL16A1-211ENST00000479100 LINC01554Q52M75 96 aa6.61□□□□□ -1.35
COL16A1-211ENST00000479100 SEC61GP60059 68 aa6.6□□□□□ -1.35
COL16A1-211ENST00000479100 TMEM258P61165 79 aa6.59□□□□□ -1.35
COL16A1-211ENST00000479100 NEBP20929 6669 aa6.59□□□□□ -1.35
COL16A1-211ENST00000479100 SERP1Q9Y6X1 66 aa6.58□□□□□ -1.36
COL16A1-211ENST00000479100 MUC12Q9UKN1 5478 aa6.57□□□□□ -1.36
COL16A1-211ENST00000479100 PCP4P48539 62 aa6.56□□□□□ -1.36
COL16A1-211ENST00000479100 A6NN06 94 aa6.55□□□□□ -1.36
COL16A1-211ENST00000479100 PLAC4Q8WY50 150 aa6.55□□□□□ -1.36
COL16A1-211ENST00000479100 KRTAP10-5P60370 271 aa6.49□□□□□ -1.37
COL16A1-211ENST00000479100 A0A1B0GU69 56 aa6.47□□□□□ -1.37
COL16A1-211ENST00000479100 KRTAP13-4Q3LI77 160 aa6.46□□□□□ -1.38
COL16A1-211ENST00000479100 A0A1B0GU33 70 aa6.44□□□□□ -1.38
COL16A1-211ENST00000479100 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
COL16A1-211ENST00000479100 SPATA8Q6RVD6 105 aa6.38□□□□□ -1.39
COL16A1-211ENST00000479100 A0A0D9SG42 100 aa6.37□□□□□ -1.39
COL16A1-211ENST00000479100 PRR15LQ9BU68 103 aa6.37□□□□□ -1.39
COL16A1-211ENST00000479100 MT1XP80297 61 aa6.36□□□□□ -1.39
COL16A1-211ENST00000479100 KMT2DO14686 5537 aa6.36□□□□□ -1.39
COL16A1-211ENST00000479100 LINC01558Q9Y6Z2 57 aa6.35□□□□□ -1.39
COL16A1-211ENST00000479100 KRTAP5-9P26371 169 aa6.33□□□□□ -1.4
COL16A1-211ENST00000479100 MDN1Q9NU22 5596 aa6.33□□□□□ -1.4
COL16A1-211ENST00000479100 SMIM26A0A096LP01 95 aa6.26□□□□□ -1.41
COL16A1-211ENST00000479100 CAMK2N1Q7Z7J9 78 aa6.26□□□□□ -1.41
COL16A1-211ENST00000479100 SPINT4Q6UDR6 99 aa6.25□□□□□ -1.41
COL16A1-211ENST00000479100 A8MU10 97 aa6.22□□□□□ -1.41
COL16A1-211ENST00000479100 KRTAP20-1Q3LI63 56 aa6.22□□□□□ -1.41
COL16A1-211ENST00000479100 KRTAP12-1P59990 96 aa6.18□□□□□ -1.42
COL16A1-211ENST00000479100 RPS28P62857 69 aaKnown RBP6.18□□□□□ -1.42
COL16A1-211ENST00000479100 V9GYY9 64 aa6.18□□□□□ -1.42
COL16A1-211ENST00000479100 UQCR11O14957 56 aa6.15□□□□□ -1.42
COL16A1-211ENST00000479100 KRTAP12-2P59991 146 aa6.15□□□□□ -1.42
COL16A1-211ENST00000479100 PSPHP1O15172 72 aa6.14□□□□□ -1.43
COL16A1-211ENST00000479100 Q1T7F1 81 aa6.13□□□□□ -1.43
COL16A1-211ENST00000479100 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.43
COL16A1-211ENST00000479100 MIR22HGQ0VDD5 57 aa6.05□□□□□ -1.44
COL16A1-211ENST00000479100 SPRR2FQ96RM1 72 aa6.04□□□□□ -1.44
COL16A1-211ENST00000479100 KRTAP2-3P0C7H8 128 aa6.03□□□□□ -1.44
COL16A1-211ENST00000479100 KRTAP10-12P60413 245 aa6.03□□□□□ -1.44
COL16A1-211ENST00000479100 KRTAP2-4Q9BYR9 128 aa6.03□□□□□ -1.44
COL16A1-211ENST00000479100 KRTAP8-1Q8IUC2 63 aa6.02□□□□□ -1.45
COL16A1-211ENST00000479100 KRTAP4-8A0A0G2JLE6 195 aa6.01□□□□□ -1.45
COL16A1-211ENST00000479100 KRTAP4-8Q9BYQ9 185 aa6.01□□□□□ -1.45
COL16A1-211ENST00000479100 SPRR2EP22531 72 aa5.98□□□□□ -1.45
COL16A1-211ENST00000479100 SPRR2BP35325 72 aa5.98□□□□□ -1.45
COL16A1-211ENST00000479100 SPRR2AP35326 72 aa5.98□□□□□ -1.45
COL16A1-211ENST00000479100 A6NED7 52 aa5.95□□□□□ -1.46
COL16A1-211ENST00000479100 LCE1AQ5T7P2 110 aa5.95□□□□□ -1.46
COL16A1-211ENST00000479100 K7ERS5 55 aa5.9□□□□□ -1.46
COL16A1-211ENST00000479100 C10orf95Q9H7T3 257 aa5.88□□□□□ -1.47
COL16A1-211ENST00000479100 KRTAP2-2Q9BYT5 123 aa5.84□□□□□ -1.47
COL16A1-211ENST00000479100 KRTAP2-1Q9BYU5 128 aa5.84□□□□□ -1.47
COL16A1-211ENST00000479100 TNP1P09430 55 aa5.83□□□□□ -1.48
COL16A1-211ENST00000479100 SPRR2DP22532 72 aa5.78□□□□□ -1.48
COL16A1-211ENST00000479100 CDC42SE1Q9NRR8 79 aa5.71□□□□□ -1.5
COL16A1-211ENST00000479100 LCE3AQ5TA76 89 aa5.68□□□□□ -1.5
COL16A1-211ENST00000479100 KRTAP19-7Q3SYF9 63 aa5.67□□□□□ -1.5
COL16A1-211ENST00000479100 KRTAP19-5Q3LI72 72 aa5.65□□□□□ -1.5
COL16A1-211ENST00000479100 LCE3BQ5TA77 95 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms