RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 LCA10Q71F78 164 aa6.53□□□□□ -1.36
LMNA-214ENST00000478063 FLGP20930 4061 aaPredicted RBP6.51□□□□□ -1.37
LMNA-214ENST00000478063 MT1HP80294 61 aa6.49□□□□□ -1.37
LMNA-214ENST00000478063 FAT4Q6V0I7 4981 aa6.46□□□□□ -1.37
LMNA-214ENST00000478063 M0R2T5 61 aa6.46□□□□□ -1.38
LMNA-214ENST00000478063 KRTAP3-3Q9BYR6 98 aa6.46□□□□□ -1.38
LMNA-214ENST00000478063 SERP1Q9Y6X1 66 aa6.46□□□□□ -1.38
LMNA-214ENST00000478063 SPTSSBQ8NFR3 76 aa6.44□□□□□ -1.38
LMNA-214ENST00000478063 CSAG1Q6PB30 78 aa6.43□□□□□ -1.38
LMNA-214ENST00000478063 LCE2AQ5TA79 106 aaPredicted RBP6.36□□□□□ -1.39
LMNA-214ENST00000478063 RPS28P62857 69 aaKnown RBP6.32□□□□□ -1.4
LMNA-214ENST00000478063 KRTAP10-6P60371 365 aaPredicted RBP6.29□□□□□ -1.4
LMNA-214ENST00000478063 SMIM26A0A096LP01 95 aa6.26□□□□□ -1.41
LMNA-214ENST00000478063 H0YAA0 97 aa6.25□□□□□ -1.41
LMNA-214ENST00000478063 LORP23490 312 aaPredicted RBP6.25□□□□□ -1.41
LMNA-214ENST00000478063 ADM2Q7Z4H4 148 aa6.25□□□□□ -1.41
LMNA-214ENST00000478063 SEC61GP60059 68 aa6.22□□□□□ -1.41
LMNA-214ENST00000478063 KRTAP9-8Q9BYQ0 159 aa6.21□□□□□ -1.42
LMNA-214ENST00000478063 LINC01558Q9Y6Z2 57 aa6.21□□□□□ -1.42
LMNA-214ENST00000478063 A0A1B0GU69 56 aa6.2□□□□□ -1.42
LMNA-214ENST00000478063 MT2AP02795 61 aa6.2□□□□□ -1.42
LMNA-214ENST00000478063 P0C880 135 aa6.18□□□□□ -1.42
LMNA-214ENST00000478063 KRTAP3-2Q9BYR7 98 aa6.18□□□□□ -1.42
LMNA-214ENST00000478063 V9GYY9 64 aa6.18□□□□□ -1.42
LMNA-214ENST00000478063 Q1T7F1 81 aa6.17□□□□□ -1.42
LMNA-214ENST00000478063 MT1FP04733 61 aa6.16□□□□□ -1.42
LMNA-214ENST00000478063 KRTAP10-10P60014 251 aa6.16□□□□□ -1.42
LMNA-214ENST00000478063 PRR15LQ9BU68 103 aa6.16□□□□□ -1.42
LMNA-214ENST00000478063 PSPHP1O15172 72 aa6.1□□□□□ -1.43
LMNA-214ENST00000478063 A0A1B0GU33 70 aa6.06□□□□□ -1.44
LMNA-214ENST00000478063 CRIPTQ9P021 101 aa6.06□□□□□ -1.44
LMNA-214ENST00000478063 R4GN34 69 aa6.05□□□□□ -1.44
LMNA-214ENST00000478063 M0QZ58 72 aa6.04□□□□□ -1.44
LMNA-214ENST00000478063 Q5VV11 94 aa6.02□□□□□ -1.45
LMNA-214ENST00000478063 KRTAP9-3Q9BYQ3 159 aa6□□□□□ -1.45
LMNA-214ENST00000478063 KRTAP13-4Q3LI77 160 aa5.98□□□□□ -1.45
LMNA-214ENST00000478063 SPATA8Q6RVD6 105 aa5.97□□□□□ -1.45
LMNA-214ENST00000478063 KRTAP19-1Q8IUB9 90 aa5.97□□□□□ -1.45
LMNA-214ENST00000478063 UQCR11O14957 56 aa5.96□□□□□ -1.46
LMNA-214ENST00000478063 SPRR2GQ9BYE4 73 aa5.96□□□□□ -1.46
LMNA-214ENST00000478063 KRTAP9-2Q9BYQ4 174 aa5.96□□□□□ -1.46
LMNA-214ENST00000478063 LINC01554Q52M75 96 aa5.94□□□□□ -1.46
LMNA-214ENST00000478063 A6NED7 52 aa5.93□□□□□ -1.46
LMNA-214ENST00000478063 A0A0D9SG42 100 aa5.89□□□□□ -1.47
LMNA-214ENST00000478063 KRTAP9-6A0A140TA67 174 aa5.89□□□□□ -1.47
LMNA-214ENST00000478063 MIR22HGQ0VDD5 57 aa5.89□□□□□ -1.47
LMNA-214ENST00000478063 LCE2BO14633 110 aa5.87□□□□□ -1.47
LMNA-214ENST00000478063 A8MU10 97 aa5.86□□□□□ -1.47
LMNA-214ENST00000478063 LCE2DQ5TA82 110 aaPredicted RBP5.86□□□□□ -1.47
LMNA-214ENST00000478063 KRTAP19-8Q3LI54 63 aa5.84□□□□□ -1.47
LMNA-214ENST00000478063 A6NN06 94 aa5.78□□□□□ -1.48
LMNA-214ENST00000478063 MT1BP07438 61 aa5.78□□□□□ -1.48
LMNA-214ENST00000478063 SPINT4Q6UDR6 99 aa5.77□□□□□ -1.49
LMNA-214ENST00000478063 PLAC4Q8WY50 150 aa5.77□□□□□ -1.49
LMNA-214ENST00000478063 CDC42SE1Q9NRR8 79 aa5.77□□□□□ -1.49
LMNA-214ENST00000478063 KRTAP12-1P59990 96 aa5.75□□□□□ -1.49
LMNA-214ENST00000478063 USH2AO75445 5202 aa5.73□□□□□ -1.49
LMNA-214ENST00000478063 KRTAP12-2P59991 146 aa5.72□□□□□ -1.49
LMNA-214ENST00000478063 BRK1Q8WUW1 75 aa5.71□□□□□ -1.5
LMNA-214ENST00000478063 K7ERS5 55 aa5.68□□□□□ -1.5
LMNA-214ENST00000478063 CAMK2N1Q7Z7J9 78 aa5.66□□□□□ -1.5
LMNA-214ENST00000478063 FSIP2Q5CZC0 6907 aa5.58□□□□□ -1.52
LMNA-214ENST00000478063 KRTAP19-6Q3LI70 58 aa5.56□□□□□ -1.52
LMNA-214ENST00000478063 MT1XP80297 61 aa5.55□□□□□ -1.52
LMNA-214ENST00000478063 PRO2289Q9P1D8 64 aa5.55□□□□□ -1.52
LMNA-214ENST00000478063 SSPOA2VEC9 5147 aa5.55□□□□□ -1.52
LMNA-214ENST00000478063 KRTAP10-5P60370 271 aa5.53□□□□□ -1.52
LMNA-214ENST00000478063 CRCT1Q9UGL9 99 aa5.52□□□□□ -1.53
LMNA-214ENST00000478063 PRO0628Q9UI54 55 aa5.46□□□□□ -1.54
LMNA-214ENST00000478063 C10orf95Q9H7T3 257 aa5.45□□□□□ -1.54
LMNA-214ENST00000478063 ROMO1P60602 79 aa5.39□□□□□ -1.55
LMNA-214ENST00000478063 PMAIP1Q13794 54 aa5.39□□□□□ -1.55
LMNA-214ENST00000478063 FCGBPQ9Y6R7 5405 aaPredicted RBP5.37□□□□□ -1.55
LMNA-214ENST00000478063 TNP1P09430 55 aa5.33□□□□□ -1.56
LMNA-214ENST00000478063 KRTAP10-7P60409 375 aaPredicted RBP5.32□□□□□ -1.56
LMNA-214ENST00000478063 KRTAP25-1Q3LHN0 102 aa5.29□□□□□ -1.56
LMNA-214ENST00000478063 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
LMNA-214ENST00000478063 KRTAP9-7A8MTY7 169 aa5.25□□□□□ -1.57
LMNA-214ENST00000478063 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.2□□□□□ -1.58
LMNA-214ENST00000478063 KRTAP4-8A0A0G2JLE6 195 aa5.15□□□□□ -1.59
LMNA-214ENST00000478063 KRTAP4-8Q9BYQ9 185 aa5.15□□□□□ -1.59
LMNA-214ENST00000478063 LCE3AQ5TA76 89 aa5.14□□□□□ -1.59
LMNA-214ENST00000478063 KMT2DO14686 5537 aa5.11□□□□□ -1.59
LMNA-214ENST00000478063 KTN1-AS1Q86SY8 53 aa5.1□□□□□ -1.59
LMNA-214ENST00000478063 KRTAP8-1Q8IUC2 63 aa5.09□□□□□ -1.59
LMNA-214ENST00000478063 PRAC1Q96KF2 57 aa5.08□□□□□ -1.6
LMNA-214ENST00000478063 KRTAP23-1A1A580 65 aa5.07□□□□□ -1.6
LMNA-214ENST00000478063 PP632Q6XCG6 107 aa5.05□□□□□ -1.6
LMNA-214ENST00000478063 MACF1Q9UPN3 7388 aaKnown RBP5.04□□□□□ -1.6
LMNA-214ENST00000478063 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
LMNA-214ENST00000478063 KRTAP19-7Q3SYF9 63 aa4.95□□□□□ -1.62
LMNA-214ENST00000478063 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
LMNA-214ENST00000478063 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
LMNA-214ENST00000478063 SYNE2Q8WXH0 6885 aaKnown RBP4.92□□□□□ -1.62
LMNA-214ENST00000478063 KRTAP6-3Q3LI67 103 aa4.92□□□□□ -1.62
LMNA-214ENST00000478063 KRTAP5-9P26371 169 aa4.91□□□□□ -1.62
LMNA-214ENST00000478063 MT1EP04732 61 aa4.88□□□□□ -1.63
LMNA-214ENST00000478063 SVIPQ8NHG7 77 aa4.86□□□□□ -1.63
LMNA-214ENST00000478063 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
LMNA-214ENST00000478063 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms