RNA–Protein interactions for RNA: ENST00000477703.5

SMIM4-203, Transcript of small integral membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM4, Length 1,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-203ENST00000477703 A6NED7 52 aa9.78□□□□□ -0.84
SMIM4-203ENST00000477703 A8MU10 97 aa9.77□□□□□ -0.85
SMIM4-203ENST00000477703 LCA10Q71F78 164 aa9.75□□□□□ -0.85
SMIM4-203ENST00000477703 KRTAP3-3Q9BYR6 98 aa9.73□□□□□ -0.85
SMIM4-203ENST00000477703 MUC17Q685J3 4493 aa9.7□□□□□ -0.86
SMIM4-203ENST00000477703 SEC61BP60468 96 aaKnown RBP9.7□□□□□ -0.86
SMIM4-203ENST00000477703 SVIPQ8NHG7 77 aa9.68□□□□□ -0.86
SMIM4-203ENST00000477703 H1FX-AS1Q4G0G2 97 aa9.67□□□□□ -0.86
SMIM4-203ENST00000477703 CDC42SE1Q9NRR8 79 aa9.67□□□□□ -0.86
SMIM4-203ENST00000477703 S4R3F8 94 aa9.65□□□□□ -0.87
SMIM4-203ENST00000477703 SEC61GP60059 68 aa9.63□□□□□ -0.87
SMIM4-203ENST00000477703 KRTAP4-1Q9BYQ7 146 aa9.63□□□□□ -0.87
SMIM4-203ENST00000477703 RBM12B-AS1Q9P1G2 102 aa9.63□□□□□ -0.87
SMIM4-203ENST00000477703 HERC1Q15751 4861 aa9.62□□□□□ -0.87
SMIM4-203ENST00000477703 UQCR11O14957 56 aa9.58□□□□□ -0.88
SMIM4-203ENST00000477703 SPATA8Q6RVD6 105 aa9.56□□□□□ -0.88
SMIM4-203ENST00000477703 HMCN2Q8NDA2 5059 aa9.55□□□□□ -0.88
SMIM4-203ENST00000477703 MIR22HGQ0VDD5 57 aa9.5□□□□□ -0.89
SMIM4-203ENST00000477703 A0A1B0GU33 70 aa9.46□□□□□ -0.9
SMIM4-203ENST00000477703 KRTAP10-6P60371 365 aaPredicted RBP9.46□□□□□ -0.9
SMIM4-203ENST00000477703 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.9
SMIM4-203ENST00000477703 KRTAP19-2Q3LHN2 52 aa9.44□□□□□ -0.9
SMIM4-203ENST00000477703 H0YAA0 97 aa9.4□□□□□ -0.9
SMIM4-203ENST00000477703 CSAG1Q6PB30 78 aa9.39□□□□□ -0.91
SMIM4-203ENST00000477703 PMAIP1Q13794 54 aa9.37□□□□□ -0.91
SMIM4-203ENST00000477703 MUC2Q02817 5179 aa9.36□□□□□ -0.91
SMIM4-203ENST00000477703 P0C880 135 aa9.32□□□□□ -0.92
SMIM4-203ENST00000477703 A6NN06 94 aa9.32□□□□□ -0.92
SMIM4-203ENST00000477703 ADM2Q7Z4H4 148 aa9.29□□□□□ -0.92
SMIM4-203ENST00000477703 KRTAP13-4Q3LI77 160 aa9.25□□□□□ -0.93
SMIM4-203ENST00000477703 FLGP20930 4061 aaPredicted RBP9.22□□□□□ -0.93
SMIM4-203ENST00000477703 RNF213Q63HN8 5207 aa9.1□□□□□ -0.95
SMIM4-203ENST00000477703 LCE2CQ5TA81 110 aa9.08□□□□□ -0.96
SMIM4-203ENST00000477703 UBR4Q5T4S7 5183 aa9.07□□□□□ -0.96
SMIM4-203ENST00000477703 KTN1-AS1Q86SY8 53 aa9.04□□□□□ -0.96
SMIM4-203ENST00000477703 A0A0D9SG42 100 aa9.04□□□□□ -0.96
SMIM4-203ENST00000477703 M0QZ58 72 aa9.03□□□□□ -0.96
SMIM4-203ENST00000477703 LORP23490 312 aaPredicted RBP8.99□□□□□ -0.97
SMIM4-203ENST00000477703 FAT4Q6V0I7 4981 aa8.95□□□□□ -0.98
SMIM4-203ENST00000477703 K7ERS5 55 aa8.93□□□□□ -0.98
SMIM4-203ENST00000477703 R4GN34 69 aa8.89□□□□□ -0.99
SMIM4-203ENST00000477703 KRTAP12-2P59991 146 aa8.89□□□□□ -0.99
SMIM4-203ENST00000477703 KRTAP12-1P59990 96 aa8.88□□□□□ -0.99
SMIM4-203ENST00000477703 MT1HP80294 61 aa8.83□□□□□ -1
SMIM4-203ENST00000477703 PRAC1Q96KF2 57 aa8.8□□□□□ -1
SMIM4-203ENST00000477703 SPINT4Q6UDR6 99 aa8.78□□□□□ -1
SMIM4-203ENST00000477703 LINC01554Q52M75 96 aa8.77□□□□□ -1.01
SMIM4-203ENST00000477703 M0R2T5 61 aa8.69□□□□□ -1.02
SMIM4-203ENST00000477703 ROMO1P60602 79 aa8.69□□□□□ -1.02
SMIM4-203ENST00000477703 CRIPTQ9P021 101 aa8.68□□□□□ -1.02
SMIM4-203ENST00000477703 KRTAP9-8Q9BYQ0 159 aa8.58□□□□□ -1.04
SMIM4-203ENST00000477703 MT2AP02795 61 aa8.55□□□□□ -1.04
SMIM4-203ENST00000477703 MT1FP04733 61 aa8.53□□□□□ -1.04
SMIM4-203ENST00000477703 SPRR2GQ9BYE4 73 aa8.51□□□□□ -1.05
SMIM4-203ENST00000477703 KRTAP19-1Q8IUB9 90 aa8.5□□□□□ -1.05
SMIM4-203ENST00000477703 KRTAP25-1Q3LHN0 102 aa8.49□□□□□ -1.05
SMIM4-203ENST00000477703 KRTAP10-10P60014 251 aa8.46□□□□□ -1.05
SMIM4-203ENST00000477703 C10orf95Q9H7T3 257 aa8.41□□□□□ -1.06
SMIM4-203ENST00000477703 CAMK2N1Q7Z7J9 78 aa8.34□□□□□ -1.07
SMIM4-203ENST00000477703 LOC100996750A0A140TA64 210 aa8.31□□□□□ -1.08
SMIM4-203ENST00000477703 KRTAP4-6Q9BYQ5 205 aa8.31□□□□□ -1.08
SMIM4-203ENST00000477703 LCE2AQ5TA79 106 aaPredicted RBP8.29□□□□□ -1.08
SMIM4-203ENST00000477703 KRTAP9-3Q9BYQ3 159 aa8.25□□□□□ -1.09
SMIM4-203ENST00000477703 KRTAP19-8Q3LI54 63 aa8.25□□□□□ -1.09
SMIM4-203ENST00000477703 PLAC4Q8WY50 150 aa8.23□□□□□ -1.09
SMIM4-203ENST00000477703 MT1BP07438 61 aa8.15□□□□□ -1.11
SMIM4-203ENST00000477703 TNP1P09430 55 aa8□□□□□ -1.13
SMIM4-203ENST00000477703 LCE2BO14633 110 aa7.99□□□□□ -1.13
SMIM4-203ENST00000477703 KRTAP10-5P60370 271 aa7.94□□□□□ -1.14
SMIM4-203ENST00000477703 MT1XP80297 61 aa7.94□□□□□ -1.14
SMIM4-203ENST00000477703 PP632Q6XCG6 107 aa7.91□□□□□ -1.14
SMIM4-203ENST00000477703 KRTAP9-2Q9BYQ4 174 aa7.87□□□□□ -1.15
SMIM4-203ENST00000477703 KRTAP23-1A1A580 65 aa7.87□□□□□ -1.15
SMIM4-203ENST00000477703 USH2AO75445 5202 aa7.77□□□□□ -1.17
SMIM4-203ENST00000477703 PRO2289Q9P1D8 64 aa7.69□□□□□ -1.18
SMIM4-203ENST00000477703 LCE3AQ5TA76 89 aa7.68□□□□□ -1.18
SMIM4-203ENST00000477703 KRTAP10-7P60409 375 aaPredicted RBP7.66□□□□□ -1.18
SMIM4-203ENST00000477703 KRTAP15-1Q3LI76 137 aa7.64□□□□□ -1.19
SMIM4-203ENST00000477703 KRTAP9-6A0A140TA67 174 aa7.6□□□□□ -1.19
SMIM4-203ENST00000477703 KRTAP10-12P60413 245 aa7.56□□□□□ -1.2
SMIM4-203ENST00000477703 KRTAP8-1Q8IUC2 63 aa7.53□□□□□ -1.2
SMIM4-203ENST00000477703 SSPOA2VEC9 5147 aa7.48□□□□□ -1.21
SMIM4-203ENST00000477703 CRCT1Q9UGL9 99 aa7.44□□□□□ -1.22
SMIM4-203ENST00000477703 FSIP2Q5CZC0 6907 aa7.41□□□□□ -1.22
SMIM4-203ENST00000477703 KRTAP19-6Q3LI70 58 aa7.38□□□□□ -1.23
SMIM4-203ENST00000477703 KRTAP4-8Q9BYQ9 185 aa7.37□□□□□ -1.23
SMIM4-203ENST00000477703 KMT2DO14686 5537 aa7.34□□□□□ -1.23
SMIM4-203ENST00000477703 KRTAP12-3P60328 96 aa7.34□□□□□ -1.23
SMIM4-203ENST00000477703 KRTAP4-8A0A0G2JLE6 195 aa7.31□□□□□ -1.24
SMIM4-203ENST00000477703 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.25□□□□□ -1.25
SMIM4-203ENST00000477703 KRTAP19-5Q3LI72 72 aa7.24□□□□□ -1.25
SMIM4-203ENST00000477703 SPRR5A0A1B0GTR4 108 aa7.22□□□□□ -1.25
SMIM4-203ENST00000477703 NDUFAF8A1L188 74 aa7.13□□□□□ -1.27
SMIM4-203ENST00000477703 KRTAP19-7Q3SYF9 63 aa7.1□□□□□ -1.27
SMIM4-203ENST00000477703 FCGBPQ9Y6R7 5405 aaPredicted RBP7.08□□□□□ -1.28
SMIM4-203ENST00000477703 LCE3BQ5TA77 95 aa7.02□□□□□ -1.29
SMIM4-203ENST00000477703 LUZP6Q538Z0 58 aa6.99□□□□□ -1.29
SMIM4-203ENST00000477703 MT1EP04732 61 aa6.92□□□□□ -1.3
SMIM4-203ENST00000477703 LCE3CQ5T5A8 94 aa6.9□□□□□ -1.31
SMIM4-203ENST00000477703 KRTAP9-9Q9BYP9 154 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms