RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 SPANXA2-OT1Q8N9U9 137 aa7.87□□□□□ -1.15
VHL-203ENST00000477538 H7BZZ5 65 aa7.85□□□□□ -1.15
VHL-203ENST00000477538 LCA10Q71F78 164 aa7.84□□□□□ -1.15
VHL-203ENST00000477538 ACYP2P14621 99 aa7.8□□□□□ -1.16
VHL-203ENST00000477538 KRTAP10-6P60371 365 aaPredicted RBP7.8□□□□□ -1.16
VHL-203ENST00000477538 LCE2BO14633 110 aa7.79□□□□□ -1.16
VHL-203ENST00000477538 LORP23490 312 aaPredicted RBP7.77□□□□□ -1.17
VHL-203ENST00000477538 CSAG1Q6PB30 78 aa7.74□□□□□ -1.17
VHL-203ENST00000477538 CHKB-CPT1BH3BT56 60 aa7.67□□□□□ -1.18
VHL-203ENST00000477538 KRTAP9-8Q9BYQ0 159 aa7.67□□□□□ -1.18
VHL-203ENST00000477538 PCP4P48539 62 aa7.65□□□□□ -1.18
VHL-203ENST00000477538 ATP5EP56381 51 aaPredicted RBP7.64□□□□□ -1.19
VHL-203ENST00000477538 MT2AP02795 61 aa7.63□□□□□ -1.19
VHL-203ENST00000477538 TMEM258P61165 79 aa7.63□□□□□ -1.19
VHL-203ENST00000477538 COA5Q86WW8 74 aa7.63□□□□□ -1.19
VHL-203ENST00000477538 SPTSSBQ8NFR3 76 aa7.61□□□□□ -1.19
VHL-203ENST00000477538 MT1FP04733 61 aa7.58□□□□□ -1.2
VHL-203ENST00000477538 KRTAP10-10P60014 251 aa7.56□□□□□ -1.2
VHL-203ENST00000477538 H0YAA0 97 aa7.53□□□□□ -1.2
VHL-203ENST00000477538 ADM2Q7Z4H4 148 aa7.48□□□□□ -1.21
VHL-203ENST00000477538 KRTAP9-2Q9BYQ4 174 aa7.46□□□□□ -1.22
VHL-203ENST00000477538 KRTAP9-3Q9BYQ3 159 aa7.41□□□□□ -1.22
VHL-203ENST00000477538 SERP1Q9Y6X1 66 aa7.39□□□□□ -1.23
VHL-203ENST00000477538 KRTAP9-6A0A140TA67 174 aa7.38□□□□□ -1.23
VHL-203ENST00000477538 P0C880 135 aa7.38□□□□□ -1.23
VHL-203ENST00000477538 CRIPTQ9P021 101 aa7.34□□□□□ -1.23
VHL-203ENST00000477538 SEC61GP60059 68 aa7.31□□□□□ -1.24
VHL-203ENST00000477538 KRTAP19-1Q8IUB9 90 aa7.29□□□□□ -1.24
VHL-203ENST00000477538 SPRR2GQ9BYE4 73 aa7.28□□□□□ -1.24
VHL-203ENST00000477538 R4GN34 69 aa7.25□□□□□ -1.25
VHL-203ENST00000477538 A0A1B0GU69 56 aa7.23□□□□□ -1.25
VHL-203ENST00000477538 M0QZ58 72 aa7.22□□□□□ -1.25
VHL-203ENST00000477538 LINC01558Q9Y6Z2 57 aa7.21□□□□□ -1.26
VHL-203ENST00000477538 RPS28P62857 69 aaKnown RBP7.18□□□□□ -1.26
VHL-203ENST00000477538 PRR15LQ9BU68 103 aa7.16□□□□□ -1.26
VHL-203ENST00000477538 KRTAP19-8Q3LI54 63 aa7.15□□□□□ -1.26
VHL-203ENST00000477538 SMIM26A0A096LP01 95 aa7.14□□□□□ -1.27
VHL-203ENST00000477538 A0A1B0GU33 70 aa7.13□□□□□ -1.27
VHL-203ENST00000477538 USH2AO75445 5202 aa7.13□□□□□ -1.27
VHL-203ENST00000477538 Q5VV11 94 aa7.12□□□□□ -1.27
VHL-203ENST00000477538 V9GYY9 64 aa7.11□□□□□ -1.27
VHL-203ENST00000477538 KRTAP13-4Q3LI77 160 aa7.1□□□□□ -1.27
VHL-203ENST00000477538 MT1BP07438 61 aa7.09□□□□□ -1.27
VHL-203ENST00000477538 Q1T7F1 81 aa7.09□□□□□ -1.27
VHL-203ENST00000477538 LINC01554Q52M75 96 aa7.09□□□□□ -1.27
VHL-203ENST00000477538 FSIP2Q5CZC0 6907 aa7.05□□□□□ -1.28
VHL-203ENST00000477538 SPATA8Q6RVD6 105 aa7.03□□□□□ -1.28
VHL-203ENST00000477538 CRCT1Q9UGL9 99 aa7.02□□□□□ -1.29
VHL-203ENST00000477538 PSPHP1O15172 72 aa7□□□□□ -1.29
VHL-203ENST00000477538 PLAC4Q8WY50 150 aa6.97□□□□□ -1.29
VHL-203ENST00000477538 SSPOA2VEC9 5147 aa6.95□□□□□ -1.3
VHL-203ENST00000477538 A0A0D9SG42 100 aa6.95□□□□□ -1.3
VHL-203ENST00000477538 A6NN06 94 aa6.94□□□□□ -1.3
VHL-203ENST00000477538 UQCR11O14957 56 aa6.93□□□□□ -1.3
VHL-203ENST00000477538 KRTAP19-6Q3LI70 58 aa6.93□□□□□ -1.3
VHL-203ENST00000477538 A8MU10 97 aa6.88□□□□□ -1.31
VHL-203ENST00000477538 KRTAP10-5P60370 271 aa6.82□□□□□ -1.32
VHL-203ENST00000477538 MIR22HGQ0VDD5 57 aa6.82□□□□□ -1.32
VHL-203ENST00000477538 KRTAP12-1P59990 96 aa6.81□□□□□ -1.32
VHL-203ENST00000477538 SPINT4Q6UDR6 99 aa6.81□□□□□ -1.32
VHL-203ENST00000477538 A6NED7 52 aa6.79□□□□□ -1.32
VHL-203ENST00000477538 KRTAP12-2P59991 146 aa6.77□□□□□ -1.33
VHL-203ENST00000477538 MT1XP80297 61 aa6.77□□□□□ -1.33
VHL-203ENST00000477538 LOC100996750A0A140TA64 210 aa6.76□□□□□ -1.33
VHL-203ENST00000477538 KRTAP4-6Q9BYQ5 205 aa6.76□□□□□ -1.33
VHL-203ENST00000477538 PRO2289Q9P1D8 64 aa6.76□□□□□ -1.33
VHL-203ENST00000477538 CAMK2N1Q7Z7J9 78 aa6.75□□□□□ -1.33
VHL-203ENST00000477538 FCGBPQ9Y6R7 5405 aaPredicted RBP6.73□□□□□ -1.33
VHL-203ENST00000477538 CDC42SE1Q9NRR8 79 aa6.61□□□□□ -1.35
VHL-203ENST00000477538 K7ERS5 55 aa6.6□□□□□ -1.35
VHL-203ENST00000477538 KRTAP9-7A8MTY7 169 aa6.59□□□□□ -1.35
VHL-203ENST00000477538 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.51□□□□□ -1.37
VHL-203ENST00000477538 KRTAP10-7P60409 375 aaPredicted RBP6.47□□□□□ -1.37
VHL-203ENST00000477538 C10orf95Q9H7T3 257 aa6.47□□□□□ -1.37
VHL-203ENST00000477538 KRTAP10-12P60413 245 aa6.43□□□□□ -1.38
VHL-203ENST00000477538 MACF1Q9UPN3 7388 aaKnown RBP6.42□□□□□ -1.38
VHL-203ENST00000477538 BRK1Q8WUW1 75 aa6.42□□□□□ -1.38
VHL-203ENST00000477538 TNP1P09430 55 aa6.35□□□□□ -1.39
VHL-203ENST00000477538 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
VHL-203ENST00000477538 KRTAP4-8Q9BYQ9 185 aa6.31□□□□□ -1.4
VHL-203ENST00000477538 KMT2DO14686 5537 aa6.28□□□□□ -1.4
VHL-203ENST00000477538 KRTAP8-1Q8IUC2 63 aa6.27□□□□□ -1.41
VHL-203ENST00000477538 SYNE2Q8WXH0 6885 aaKnown RBP6.27□□□□□ -1.41
VHL-203ENST00000477538 ROMO1P60602 79 aa6.25□□□□□ -1.41
VHL-203ENST00000477538 KRTAP6-3Q3LI67 103 aa6.25□□□□□ -1.41
VHL-203ENST00000477538 KRTAP25-1Q3LHN0 102 aa6.24□□□□□ -1.41
VHL-203ENST00000477538 KRTAP5-9P26371 169 aa6.17□□□□□ -1.42
VHL-203ENST00000477538 LCE3AQ5TA76 89 aa6.15□□□□□ -1.42
VHL-203ENST00000477538 SPRR2FQ96RM1 72 aa6.13□□□□□ -1.43
VHL-203ENST00000477538 PMAIP1Q13794 54 aa6.06□□□□□ -1.44
VHL-203ENST00000477538 PRO0628Q9UI54 55 aa6.06□□□□□ -1.44
VHL-203ENST00000477538 KRTAP19-7Q3SYF9 63 aa6.04□□□□□ -1.44
VHL-203ENST00000477538 KRTAP19-5Q3LI72 72 aa6.03□□□□□ -1.44
VHL-203ENST00000477538 KRTAP23-1A1A580 65 aa6.02□□□□□ -1.45
VHL-203ENST00000477538 MT1EP04732 61 aa5.96□□□□□ -1.46
VHL-203ENST00000477538 KRTAP4-12Q9BQ66 201 aa5.95□□□□□ -1.46
VHL-203ENST00000477538 MUC12Q9UKN1 5478 aa5.93□□□□□ -1.46
VHL-203ENST00000477538 PP632Q6XCG6 107 aa5.93□□□□□ -1.46
VHL-203ENST00000477538 SPRR2EP22531 72 aa5.92□□□□□ -1.46
VHL-203ENST00000477538 SPRR2BP35325 72 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms