RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 Q5W150 140 aa3.69□□□□□ -1.82
LDB3-206ENST00000477489 C20orf166-AS1Q96NR2 134 aa3.69□□□□□ -1.82
LDB3-206ENST00000477489 RNF213Q63HN8 5207 aa3.66□□□□□ -1.82
LDB3-206ENST00000477489 Q75L30 129 aa3.66□□□□□ -1.82
LDB3-206ENST00000477489 C7orf65Q6ZTY9 151 aa3.64□□□□□ -1.83
LDB3-206ENST00000477489 MT1HL1P0DM35 61 aa3.63□□□□□ -1.83
LDB3-206ENST00000477489 PCOTHQ58A44 107 aa3.63□□□□□ -1.83
LDB3-206ENST00000477489 V9GYY9 64 aa3.63□□□□□ -1.83
LDB3-206ENST00000477489 A8MUN3 132 aa3.62□□□□□ -1.83
LDB3-206ENST00000477489 ACYP2P14621 99 aa3.62□□□□□ -1.83
LDB3-206ENST00000477489 DMAC1Q96GE9 116 aa3.62□□□□□ -1.83
LDB3-206ENST00000477489 LRP1Q07954 4544 aaKnown RBP3.62□□□□□ -1.83
LDB3-206ENST00000477489 TNXBP22105 4242 aa3.62□□□□□ -1.83
LDB3-206ENST00000477489 HRES1P13985 223 aa3.61□□□□□ -1.83
LDB3-206ENST00000477489 FAT3Q8TDW7 4589 aa3.6□□□□□ -1.83
LDB3-206ENST00000477489 C9orf92A6NGG3 77 aa3.6□□□□□ -1.83
LDB3-206ENST00000477489 Q1T7F1 81 aa3.6□□□□□ -1.83
LDB3-206ENST00000477489 LCE1AQ5T7P2 110 aa3.6□□□□□ -1.83
LDB3-206ENST00000477489 RETNLBQ9BQ08 111 aa3.6□□□□□ -1.83
LDB3-206ENST00000477489 LRP2P98164 4655 aa3.59□□□□□ -1.83
LDB3-206ENST00000477489 IGKV2D-30A0A075B6S6 120 aa3.59□□□□□ -1.83
LDB3-206ENST00000477489 RPL37P61927 97 aaKnown RBP3.59□□□□□ -1.83
LDB3-206ENST00000477489 PRR4Q16378 134 aa3.59□□□□□ -1.83
LDB3-206ENST00000477489 TPRXLQ17RH7 258 aa3.59□□□□□ -1.83
LDB3-206ENST00000477489 COA5Q86WW8 74 aa3.59□□□□□ -1.83
LDB3-206ENST00000477489 ATP11AUNQ6ZP68 121 aa3.58□□□□□ -1.84
LDB3-206ENST00000477489 SPINK7P58062 85 aa3.54□□□□□ -1.84
LDB3-206ENST00000477489 CHKB-CPT1BH3BT56 60 aa3.53□□□□□ -1.84
LDB3-206ENST00000477489 SPTSSBQ8NFR3 76 aa3.53□□□□□ -1.84
LDB3-206ENST00000477489 LINC01558Q9Y6Z2 57 aa3.52□□□□□ -1.85
LDB3-206ENST00000477489 COX6B2Q6YFQ2 88 aa3.51□□□□□ -1.85
LDB3-206ENST00000477489 MPLKIPQ8TAP9 179 aa3.51□□□□□ -1.85
LDB3-206ENST00000477489 FAT4Q6V0I7 4981 aa3.5□□□□□ -1.85
LDB3-206ENST00000477489 C4orf26Q17RF5 130 aa3.49□□□□□ -1.85
LDB3-206ENST00000477489 PRR15LQ9BU68 103 aa3.48□□□□□ -1.85
LDB3-206ENST00000477489 SEC61BP60468 96 aaKnown RBP3.47□□□□□ -1.85
LDB3-206ENST00000477489 MUC2Q02817 5179 aa3.47□□□□□ -1.85
LDB3-206ENST00000477489 CRCT1Q9UGL9 99 aa3.46□□□□□ -1.86
LDB3-206ENST00000477489 Q5VV11 94 aa3.44□□□□□ -1.86
LDB3-206ENST00000477489 PSPHP1O15172 72 aa3.43□□□□□ -1.86
LDB3-206ENST00000477489 A0A1B0GU69 56 aa3.42□□□□□ -1.86
LDB3-206ENST00000477489 SEC61GP60059 68 aa3.42□□□□□ -1.86
LDB3-206ENST00000477489 RBM12B-AS1Q9P1G2 102 aa3.42□□□□□ -1.86
LDB3-206ENST00000477489 LPAP08519 4548 aa3.42□□□□□ -1.86
LDB3-206ENST00000477489 PRO0628Q9UI54 55 aa3.41□□□□□ -1.86
LDB3-206ENST00000477489 H1FX-AS1Q4G0G2 97 aa3.39□□□□□ -1.87
LDB3-206ENST00000477489 A6NED7 52 aa3.37□□□□□ -1.87
LDB3-206ENST00000477489 BRK1Q8WUW1 75 aa3.37□□□□□ -1.87
LDB3-206ENST00000477489 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
LDB3-206ENST00000477489 CDC42SE1Q9NRR8 79 aa3.37□□□□□ -1.87
LDB3-206ENST00000477489 S4R3F8 94 aa3.37□□□□□ -1.87
LDB3-206ENST00000477489 UQCR11O14957 56 aa3.36□□□□□ -1.87
LDB3-206ENST00000477489 MUC17Q685J3 4493 aa3.34□□□□□ -1.87
LDB3-206ENST00000477489 FSIP2Q5CZC0 6907 aa3.34□□□□□ -1.87
LDB3-206ENST00000477489 KRTAP10-7P60409 375 aaPredicted RBP3.33□□□□□ -1.88
LDB3-206ENST00000477489 LCA10Q71F78 164 aa3.33□□□□□ -1.88
LDB3-206ENST00000477489 KRTAP10-6P60371 365 aaPredicted RBP3.32□□□□□ -1.88
LDB3-206ENST00000477489 SPATA8Q6RVD6 105 aa3.32□□□□□ -1.88
LDB3-206ENST00000477489 H0YAA0 97 aa3.31□□□□□ -1.88
LDB3-206ENST00000477489 CSAG1Q6PB30 78 aa3.31□□□□□ -1.88
LDB3-206ENST00000477489 MIR22HGQ0VDD5 57 aa3.3□□□□□ -1.88
LDB3-206ENST00000477489 A0A1B0GU33 70 aa3.29□□□□□ -1.88
LDB3-206ENST00000477489 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
LDB3-206ENST00000477489 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
LDB3-206ENST00000477489 KRTAP4-1Q9BYQ7 146 aa3.24□□□□□ -1.89
LDB3-206ENST00000477489 KRTAP19-2Q3LHN2 52 aa3.23□□□□□ -1.89
LDB3-206ENST00000477489 M0QZ58 72 aa3.21□□□□□ -1.9
LDB3-206ENST00000477489 PMAIP1Q13794 54 aa3.21□□□□□ -1.9
LDB3-206ENST00000477489 K7ERS5 55 aa3.2□□□□□ -1.9
LDB3-206ENST00000477489 ADM2Q7Z4H4 148 aa3.2□□□□□ -1.9
LDB3-206ENST00000477489 A6NN06 94 aa3.19□□□□□ -1.9
LDB3-206ENST00000477489 A8MU10 97 aa3.19□□□□□ -1.9
LDB3-206ENST00000477489 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
LDB3-206ENST00000477489 P0C880 135 aa3.16□□□□□ -1.9
LDB3-206ENST00000477489 CRIPTQ9P021 101 aa3.15□□□□□ -1.91
LDB3-206ENST00000477489 KTN1-AS1Q86SY8 53 aa3.14□□□□□ -1.91
LDB3-206ENST00000477489 MT3P25713 68 aa3.13□□□□□ -1.91
LDB3-206ENST00000477489 KRTAP13-4Q3LI77 160 aa3.12□□□□□ -1.91
LDB3-206ENST00000477489 FLGP20930 4061 aaPredicted RBP3.11□□□□□ -1.91
LDB3-206ENST00000477489 R4GN34 69 aa3.11□□□□□ -1.91
LDB3-206ENST00000477489 A0A0D9SG42 100 aa3.05□□□□□ -1.92
LDB3-206ENST00000477489 KRTAP12-1P59990 96 aa3.05□□□□□ -1.92
LDB3-206ENST00000477489 MT1HP80294 61 aa3.05□□□□□ -1.92
LDB3-206ENST00000477489 ROMO1P60602 79 aa3.03□□□□□ -1.92
LDB3-206ENST00000477489 M0R2T5 61 aa3.02□□□□□ -1.93
LDB3-206ENST00000477489 KRTAP12-2P59991 146 aa3.02□□□□□ -1.93
LDB3-206ENST00000477489 SPINT4Q6UDR6 99 aa3.01□□□□□ -1.93
LDB3-206ENST00000477489 SPRR2GQ9BYE4 73 aa2.99□□□□□ -1.93
LDB3-206ENST00000477489 LINC01554Q52M75 96 aa2.98□□□□□ -1.93
LDB3-206ENST00000477489 SSPOA2VEC9 5147 aa2.97□□□□□ -1.93
LDB3-206ENST00000477489 MT2AP02795 61 aa2.95□□□□□ -1.94
LDB3-206ENST00000477489 FCGBPQ9Y6R7 5405 aaPredicted RBP2.95□□□□□ -1.94
LDB3-206ENST00000477489 USH2AO75445 5202 aa2.93□□□□□ -1.94
LDB3-206ENST00000477489 SYNE2Q8WXH0 6885 aaKnown RBP2.93□□□□□ -1.94
LDB3-206ENST00000477489 KRTAP25-1Q3LHN0 102 aa2.93□□□□□ -1.94
LDB3-206ENST00000477489 MT1FP04733 61 aa2.92□□□□□ -1.94
LDB3-206ENST00000477489 KRTAP10-10P60014 251 aa2.92□□□□□ -1.94
LDB3-206ENST00000477489 KRTAP10-5P60370 271 aa2.92□□□□□ -1.94
LDB3-206ENST00000477489 CAMK2N1Q7Z7J9 78 aa2.92□□□□□ -1.94
LDB3-206ENST00000477489 PRAC1Q96KF2 57 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms