RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 PRR15LQ9BU68 103 aa8.78□□□□□ -1
EPHB4-204ENST00000477446 Q5VV11 94 aa8.78□□□□□ -1
EPHB4-204ENST00000477446 PRO0628Q9UI54 55 aa8.78□□□□□ -1
EPHB4-204ENST00000477446 SPINK7P58062 85 aa8.74□□□□□ -1.01
EPHB4-204ENST00000477446 BRK1Q8WUW1 75 aa8.74□□□□□ -1.01
EPHB4-204ENST00000477446 SPTSSBQ8NFR3 76 aa8.67□□□□□ -1.02
EPHB4-204ENST00000477446 FAT4Q6V0I7 4981 aa8.63□□□□□ -1.03
EPHB4-204ENST00000477446 KRTAP19-2Q3LHN2 52 aa8.62□□□□□ -1.03
EPHB4-204ENST00000477446 COX6B2Q6YFQ2 88 aa8.61□□□□□ -1.03
EPHB4-204ENST00000477446 A6NED7 52 aa8.61□□□□□ -1.03
EPHB4-204ENST00000477446 A0A1B0GU69 56 aa8.6□□□□□ -1.03
EPHB4-204ENST00000477446 LCE2CQ5TA81 110 aa8.56□□□□□ -1.04
EPHB4-204ENST00000477446 KRTAP3-1Q9BYR8 98 aa8.56□□□□□ -1.04
EPHB4-204ENST00000477446 SEC61GP60059 68 aa8.53□□□□□ -1.04
EPHB4-204ENST00000477446 CDC42SE1Q9NRR8 79 aa8.53□□□□□ -1.04
EPHB4-204ENST00000477446 RBM12B-AS1Q9P1G2 102 aa8.5□□□□□ -1.05
EPHB4-204ENST00000477446 LCA10Q71F78 164 aa8.48□□□□□ -1.05
EPHB4-204ENST00000477446 LCE2AQ5TA79 106 aaPredicted RBP8.46□□□□□ -1.06
EPHB4-204ENST00000477446 KRTAP9-2Q9BYQ4 174 aa8.44□□□□□ -1.06
EPHB4-204ENST00000477446 UQCR11O14957 56 aa8.43□□□□□ -1.06
EPHB4-204ENST00000477446 MT1HP80294 61 aa8.43□□□□□ -1.06
EPHB4-204ENST00000477446 SPATA8Q6RVD6 105 aa8.38□□□□□ -1.07
EPHB4-204ENST00000477446 A8MU10 97 aa8.36□□□□□ -1.07
EPHB4-204ENST00000477446 FLGP20930 4061 aaPredicted RBP8.36□□□□□ -1.07
EPHB4-204ENST00000477446 MIR22HGQ0VDD5 57 aa8.33□□□□□ -1.08
EPHB4-204ENST00000477446 PMAIP1Q13794 54 aa8.31□□□□□ -1.08
EPHB4-204ENST00000477446 H1FX-AS1Q4G0G2 97 aa8.31□□□□□ -1.08
EPHB4-204ENST00000477446 M0R2T5 61 aa8.3□□□□□ -1.08
EPHB4-204ENST00000477446 S4R3F8 94 aa8.3□□□□□ -1.08
EPHB4-204ENST00000477446 KRTAP9-6A0A140TA67 174 aa8.26□□□□□ -1.09
EPHB4-204ENST00000477446 KRTAP3-3Q9BYR6 98 aa8.25□□□□□ -1.09
EPHB4-204ENST00000477446 A0A1B0GU33 70 aa8.23□□□□□ -1.09
EPHB4-204ENST00000477446 A6NN06 94 aa8.19□□□□□ -1.1
EPHB4-204ENST00000477446 KRTAP10-6P60371 365 aaPredicted RBP8.19□□□□□ -1.1
EPHB4-204ENST00000477446 LORP23490 312 aaPredicted RBP8.17□□□□□ -1.1
EPHB4-204ENST00000477446 CSAG1Q6PB30 78 aa8.11□□□□□ -1.11
EPHB4-204ENST00000477446 H0YAA0 97 aa8.1□□□□□ -1.11
EPHB4-204ENST00000477446 KTN1-AS1Q86SY8 53 aa8.07□□□□□ -1.12
EPHB4-204ENST00000477446 KRTAP3-2Q9BYR7 98 aa8.05□□□□□ -1.12
EPHB4-204ENST00000477446 KRTAP9-8Q9BYQ0 159 aa8.05□□□□□ -1.12
EPHB4-204ENST00000477446 MT2AP02795 61 aa7.97□□□□□ -1.13
EPHB4-204ENST00000477446 LCE2DQ5TA82 110 aaPredicted RBP7.97□□□□□ -1.13
EPHB4-204ENST00000477446 K7ERS5 55 aa7.97□□□□□ -1.13
EPHB4-204ENST00000477446 ADM2Q7Z4H4 148 aa7.96□□□□□ -1.14
EPHB4-204ENST00000477446 MT1FP04733 61 aa7.92□□□□□ -1.14
EPHB4-204ENST00000477446 P0C880 135 aa7.92□□□□□ -1.14
EPHB4-204ENST00000477446 CRCT1Q9UGL9 99 aa7.92□□□□□ -1.14
EPHB4-204ENST00000477446 FSIP2Q5CZC0 6907 aa7.91□□□□□ -1.14
EPHB4-204ENST00000477446 KRTAP10-10P60014 251 aa7.89□□□□□ -1.15
EPHB4-204ENST00000477446 M0QZ58 72 aa7.88□□□□□ -1.15
EPHB4-204ENST00000477446 KRTAP13-4Q3LI77 160 aa7.84□□□□□ -1.15
EPHB4-204ENST00000477446 KRTAP9-3Q9BYQ3 159 aa7.78□□□□□ -1.16
EPHB4-204ENST00000477446 A0A0D9SG42 100 aa7.76□□□□□ -1.17
EPHB4-204ENST00000477446 H3BS24 57 aa7.69□□□□□ -1.18
EPHB4-204ENST00000477446 R4GN34 69 aa7.67□□□□□ -1.18
EPHB4-204ENST00000477446 PRAC1Q96KF2 57 aa7.66□□□□□ -1.18
EPHB4-204ENST00000477446 LCE2BO14633 110 aa7.65□□□□□ -1.18
EPHB4-204ENST00000477446 ROMO1P60602 79 aa7.63□□□□□ -1.19
EPHB4-204ENST00000477446 KRTAP12-1P59990 96 aa7.63□□□□□ -1.19
EPHB4-204ENST00000477446 USH2AO75445 5202 aa7.62□□□□□ -1.19
EPHB4-204ENST00000477446 KRTAP12-2P59991 146 aa7.59□□□□□ -1.19
EPHB4-204ENST00000477446 KRTAP19-1Q8IUB9 90 aa7.59□□□□□ -1.19
EPHB4-204ENST00000477446 SPINT4Q6UDR6 99 aa7.59□□□□□ -1.2
EPHB4-204ENST00000477446 CRIPTQ9P021 101 aa7.58□□□□□ -1.2
EPHB4-204ENST00000477446 SPRR2GQ9BYE4 73 aa7.55□□□□□ -1.2
EPHB4-204ENST00000477446 KRTAP25-1Q3LHN0 102 aa7.49□□□□□ -1.21
EPHB4-204ENST00000477446 LINC01554Q52M75 96 aa7.49□□□□□ -1.21
EPHB4-204ENST00000477446 SSPOA2VEC9 5147 aa7.46□□□□□ -1.22
EPHB4-204ENST00000477446 KRTAP19-8Q3LI54 63 aa7.44□□□□□ -1.22
EPHB4-204ENST00000477446 A0A0A0MQY5 61 aa7.42□□□□□ -1.22
EPHB4-204ENST00000477446 KRTAP9-7A8MTY7 169 aa7.39□□□□□ -1.23
EPHB4-204ENST00000477446 MT1BP07438 61 aa7.38□□□□□ -1.23
EPHB4-204ENST00000477446 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.37□□□□□ -1.23
EPHB4-204ENST00000477446 KRTAP19-6Q3LI70 58 aa7.29□□□□□ -1.24
EPHB4-204ENST00000477446 CAMK2N1Q7Z7J9 78 aa7.23□□□□□ -1.25
EPHB4-204ENST00000477446 FCGBPQ9Y6R7 5405 aaPredicted RBP7.21□□□□□ -1.26
EPHB4-204ENST00000477446 PLAC4Q8WY50 150 aa7.19□□□□□ -1.26
EPHB4-204ENST00000477446 C10orf95Q9H7T3 257 aa7.19□□□□□ -1.26
EPHB4-204ENST00000477446 KRTAP10-5P60370 271 aa7.12□□□□□ -1.27
EPHB4-204ENST00000477446 MT1XP80297 61 aa7.03□□□□□ -1.28
EPHB4-204ENST00000477446 MACF1Q9UPN3 7388 aaKnown RBP7.01□□□□□ -1.29
EPHB4-204ENST00000477446 PP632Q6XCG6 107 aa7.01□□□□□ -1.29
EPHB4-204ENST00000477446 PRO2289Q9P1D8 64 aa7□□□□□ -1.29
EPHB4-204ENST00000477446 SYNE2Q8WXH0 6885 aaKnown RBP6.99□□□□□ -1.29
EPHB4-204ENST00000477446 TNP1P09430 55 aa6.97□□□□□ -1.29
EPHB4-204ENST00000477446 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
EPHB4-204ENST00000477446 KRTAP6-3Q3LI67 103 aa6.78□□□□□ -1.32
EPHB4-204ENST00000477446 KRTAP10-7P60409 375 aaPredicted RBP6.73□□□□□ -1.33
EPHB4-204ENST00000477446 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
EPHB4-204ENST00000477446 KRTAP10-12P60413 245 aa6.68□□□□□ -1.34
EPHB4-204ENST00000477446 KMT2DO14686 5537 aa6.65□□□□□ -1.35
EPHB4-204ENST00000477446 KRTAP4-8A0A0G2JLE6 195 aa6.61□□□□□ -1.35
EPHB4-204ENST00000477446 KRTAP4-8Q9BYQ9 185 aa6.61□□□□□ -1.35
EPHB4-204ENST00000477446 NEBP20929 6669 aa6.59□□□□□ -1.35
EPHB4-204ENST00000477446 KRTAP8-1Q8IUC2 63 aa6.55□□□□□ -1.36
EPHB4-204ENST00000477446 LCE3AQ5TA76 89 aa6.52□□□□□ -1.36
EPHB4-204ENST00000477446 KRTAP5-9P26371 169 aa6.52□□□□□ -1.37
EPHB4-204ENST00000477446 MUC12Q9UKN1 5478 aa6.49□□□□□ -1.37
EPHB4-204ENST00000477446 KRTAP20-1Q3LI63 56 aa6.46□□□□□ -1.38
EPHB4-204ENST00000477446 SPRR2FQ96RM1 72 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms