RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 BIRC6Q9NR09 4857 aa8.83□□□□□ -1
TMEM53-208ENST00000476724 UQCR11O14957 56 aa8.82□□□□□ -1
TMEM53-208ENST00000476724 SPATA8Q6RVD6 105 aa8.82□□□□□ -1
TMEM53-208ENST00000476724 DMBT1Q9UGM3 2413 aaPredicted RBP8.81□□□□□ -1
TMEM53-208ENST00000476724 LCE2AQ5TA79 106 aaPredicted RBP8.81□□□□□ -1
TMEM53-208ENST00000476724 KTN1-AS1Q86SY8 53 aa8.79□□□□□ -1
TMEM53-208ENST00000476724 ABCA13Q86UQ4 5058 aa8.79□□□□□ -1
TMEM53-208ENST00000476724 SEC61GP60059 68 aa8.77□□□□□ -1
TMEM53-208ENST00000476724 MIR22HGQ0VDD5 57 aa8.76□□□□□ -1.01
TMEM53-208ENST00000476724 HERC2O95714 4834 aa8.74□□□□□ -1.01
TMEM53-208ENST00000476724 KRTAP3-1Q9BYR8 98 aa8.73□□□□□ -1.01
TMEM53-208ENST00000476724 COX6B2Q6YFQ2 88 aa8.68□□□□□ -1.02
TMEM53-208ENST00000476724 RPL37P61927 97 aaKnown RBP8.62□□□□□ -1.03
TMEM53-208ENST00000476724 LORP23490 312 aaPredicted RBP8.56□□□□□ -1.04
TMEM53-208ENST00000476724 XP32Q5T750 250 aa8.56□□□□□ -1.04
TMEM53-208ENST00000476724 A0A1B0GU33 70 aa8.52□□□□□ -1.05
TMEM53-208ENST00000476724 LPAP08519 4548 aa8.51□□□□□ -1.05
TMEM53-208ENST00000476724 H1FX-AS1Q4G0G2 97 aa8.49□□□□□ -1.05
TMEM53-208ENST00000476724 RBM12B-AS1Q9P1G2 102 aa8.48□□□□□ -1.05
TMEM53-208ENST00000476724 H0YAA0 97 aa8.47□□□□□ -1.05
TMEM53-208ENST00000476724 TPRXLQ17RH7 258 aa8.44□□□□□ -1.06
TMEM53-208ENST00000476724 LRP2P98164 4655 aa8.43□□□□□ -1.06
TMEM53-208ENST00000476724 PCLOQ9Y6V0 5065 aa8.43□□□□□ -1.06
TMEM53-208ENST00000476724 S4R3F8 94 aa8.37□□□□□ -1.07
TMEM53-208ENST00000476724 PRAC1Q96KF2 57 aa8.34□□□□□ -1.07
TMEM53-208ENST00000476724 ADM2Q7Z4H4 148 aa8.33□□□□□ -1.08
TMEM53-208ENST00000476724 KRTAP10-6P60371 365 aaPredicted RBP8.28□□□□□ -1.08
TMEM53-208ENST00000476724 K7ERS5 55 aa8.28□□□□□ -1.08
TMEM53-208ENST00000476724 HERC1Q15751 4861 aa8.26□□□□□ -1.09
TMEM53-208ENST00000476724 CSAG1Q6PB30 78 aa8.17□□□□□ -1.1
TMEM53-208ENST00000476724 HMCN2Q8NDA2 5059 aa8.16□□□□□ -1.1
TMEM53-208ENST00000476724 MUC17Q685J3 4493 aa8.14□□□□□ -1.11
TMEM53-208ENST00000476724 SEC61BP60468 96 aaKnown RBP8.12□□□□□ -1.11
TMEM53-208ENST00000476724 KRTAP13-4Q3LI77 160 aa8.12□□□□□ -1.11
TMEM53-208ENST00000476724 LINC01554Q52M75 96 aa8.12□□□□□ -1.11
TMEM53-208ENST00000476724 P0C880 135 aa8.1□□□□□ -1.11
TMEM53-208ENST00000476724 KRTAP4-1Q9BYQ7 146 aa8.09□□□□□ -1.11
TMEM53-208ENST00000476724 A0A0D9SG42 100 aa8.04□□□□□ -1.12
TMEM53-208ENST00000476724 KRTAP25-1Q3LHN0 102 aa8.02□□□□□ -1.12
TMEM53-208ENST00000476724 ROMO1P60602 79 aa8.01□□□□□ -1.13
TMEM53-208ENST00000476724 M0QZ58 72 aa7.98□□□□□ -1.13
TMEM53-208ENST00000476724 MUC2Q02817 5179 aa7.97□□□□□ -1.13
TMEM53-208ENST00000476724 KRTAP12-2P59991 146 aa7.87□□□□□ -1.15
TMEM53-208ENST00000476724 KRTAP19-2Q3LHN2 52 aa7.87□□□□□ -1.15
TMEM53-208ENST00000476724 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
TMEM53-208ENST00000476724 UBR4Q5T4S7 5183 aa7.83□□□□□ -1.16
TMEM53-208ENST00000476724 SPINT4Q6UDR6 99 aa7.83□□□□□ -1.16
TMEM53-208ENST00000476724 CRIPTQ9P021 101 aa7.82□□□□□ -1.16
TMEM53-208ENST00000476724 RNF213Q63HN8 5207 aa7.77□□□□□ -1.17
TMEM53-208ENST00000476724 R4GN34 69 aa7.75□□□□□ -1.17
TMEM53-208ENST00000476724 FLGP20930 4061 aaPredicted RBP7.7□□□□□ -1.18
TMEM53-208ENST00000476724 FAT4Q6V0I7 4981 aa7.63□□□□□ -1.19
TMEM53-208ENST00000476724 C10orf95Q9H7T3 257 aa7.59□□□□□ -1.19
TMEM53-208ENST00000476724 LOC100996750A0A140TA64 210 aa7.57□□□□□ -1.2
TMEM53-208ENST00000476724 KRTAP4-6Q9BYQ5 205 aa7.57□□□□□ -1.2
TMEM53-208ENST00000476724 MT1HP80294 61 aa7.46□□□□□ -1.22
TMEM53-208ENST00000476724 M0R2T5 61 aa7.37□□□□□ -1.23
TMEM53-208ENST00000476724 CAMK2N1Q7Z7J9 78 aa7.34□□□□□ -1.23
TMEM53-208ENST00000476724 KRTAP15-1Q3LI76 137 aa7.26□□□□□ -1.25
TMEM53-208ENST00000476724 PP632Q6XCG6 107 aa7.23□□□□□ -1.25
TMEM53-208ENST00000476724 KRTAP9-8Q9BYQ0 159 aa7.2□□□□□ -1.26
TMEM53-208ENST00000476724 MT2AP02795 61 aa7.19□□□□□ -1.26
TMEM53-208ENST00000476724 MT1FP04733 61 aa7.17□□□□□ -1.26
TMEM53-208ENST00000476724 SPRR2GQ9BYE4 73 aa7.14□□□□□ -1.27
TMEM53-208ENST00000476724 H3BS24 57 aa7.12□□□□□ -1.27
TMEM53-208ENST00000476724 KRTAP10-10P60014 251 aa7.11□□□□□ -1.27
TMEM53-208ENST00000476724 TNP1P09430 55 aa7.09□□□□□ -1.27
TMEM53-208ENST00000476724 KRTAP19-1Q8IUB9 90 aa7.07□□□□□ -1.28
TMEM53-208ENST00000476724 KRTAP23-1A1A580 65 aa7.07□□□□□ -1.28
TMEM53-208ENST00000476724 PLAC4Q8WY50 150 aa7.06□□□□□ -1.28
TMEM53-208ENST00000476724 KRTAP4-8Q9BYQ9 185 aa7.05□□□□□ -1.28
TMEM53-208ENST00000476724 KRTAP9-1A8MXZ3 250 aaPredicted RBP7□□□□□ -1.29
TMEM53-208ENST00000476724 KRTAP9-2Q9BYQ4 174 aa6.98□□□□□ -1.29
TMEM53-208ENST00000476724 NDUFAF8A1L188 74 aa6.97□□□□□ -1.29
TMEM53-208ENST00000476724 KRTAP9-6A0A140TA67 174 aa6.93□□□□□ -1.3
TMEM53-208ENST00000476724 KRTAP9-3Q9BYQ3 159 aa6.92□□□□□ -1.3
TMEM53-208ENST00000476724 KRTAP4-12Q9BQ66 201 aa6.86□□□□□ -1.31
TMEM53-208ENST00000476724 KRTAP19-8Q3LI54 63 aa6.85□□□□□ -1.31
TMEM53-208ENST00000476724 MT1BP07438 61 aa6.8□□□□□ -1.32
TMEM53-208ENST00000476724 LUZP6Q538Z0 58 aa6.72□□□□□ -1.33
TMEM53-208ENST00000476724 LCE3BQ5TA77 95 aa6.72□□□□□ -1.33
TMEM53-208ENST00000476724 LCE3AQ5TA76 89 aa6.65□□□□□ -1.35
TMEM53-208ENST00000476724 KRTAP9-9Q9BYP9 154 aa6.64□□□□□ -1.35
TMEM53-208ENST00000476724 KRTAP9-4Q9BYQ2 154 aa6.64□□□□□ -1.35
TMEM53-208ENST00000476724 USH2AO75445 5202 aa6.64□□□□□ -1.35
TMEM53-208ENST00000476724 KRTAP10-5P60370 271 aa6.63□□□□□ -1.35
TMEM53-208ENST00000476724 SPRR5A0A1B0GTR4 108 aa6.62□□□□□ -1.35
TMEM53-208ENST00000476724 MT1XP80297 61 aa6.62□□□□□ -1.35
TMEM53-208ENST00000476724 KRTAP8-1Q8IUC2 63 aa6.56□□□□□ -1.36
TMEM53-208ENST00000476724 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
TMEM53-208ENST00000476724 PRO2289Q9P1D8 64 aa6.51□□□□□ -1.37
TMEM53-208ENST00000476724 KRTAP10-12P60413 245 aa6.48□□□□□ -1.37
TMEM53-208ENST00000476724 KRTAP4-8A0A0G2JLE6 195 aa6.41□□□□□ -1.38
TMEM53-208ENST00000476724 SSPOA2VEC9 5147 aa6.4□□□□□ -1.38
TMEM53-208ENST00000476724 KRTAP10-7P60409 375 aaPredicted RBP6.39□□□□□ -1.39
TMEM53-208ENST00000476724 KRTAP12-3P60328 96 aa6.38□□□□□ -1.39
TMEM53-208ENST00000476724 FSIP2Q5CZC0 6907 aa6.37□□□□□ -1.39
TMEM53-208ENST00000476724 KRTAP9-7A8MTY7 169 aa6.34□□□□□ -1.39
TMEM53-208ENST00000476724 A0A0A0MQY5 61 aa6.29□□□□□ -1.4
TMEM53-208ENST00000476724 LCE1DQ5T752 114 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 214.9 ms