RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 CYP4F30PQ9H0H9 118 aa6.7□□□□□ -1.34
HLA-DPA1-246ENST00000476642 IGKV2D-30A0A075B6S6 120 aa6.69□□□□□ -1.34
HLA-DPA1-246ENST00000476642 IGKV2-30P06310 120 aa6.69□□□□□ -1.34
HLA-DPA1-246ENST00000476642 Q1T7F1 81 aa6.69□□□□□ -1.34
HLA-DPA1-246ENST00000476642 H3BPC8 53 aa6.67□□□□□ -1.34
HLA-DPA1-246ENST00000476642 TRAV22A0A0B4J277 110 aa6.65□□□□□ -1.34
HLA-DPA1-246ENST00000476642 MP68P56378 58 aa6.65□□□□□ -1.34
HLA-DPA1-246ENST00000476642 KRTAP10-6P60371 365 aaPredicted RBP6.64□□□□□ -1.35
HLA-DPA1-246ENST00000476642 LORP23490 312 aaPredicted RBP6.62□□□□□ -1.35
HLA-DPA1-246ENST00000476642 C1orf64Q8NEQ6 169 aa6.61□□□□□ -1.35
HLA-DPA1-246ENST00000476642 SPANXA2-OT1Q8N9U9 137 aa6.6□□□□□ -1.35
HLA-DPA1-246ENST00000476642 LOC101927531A0A1B0GV80 90 aa6.59□□□□□ -1.35
HLA-DPA1-246ENST00000476642 H0Y9P7 68 aa6.57□□□□□ -1.36
HLA-DPA1-246ENST00000476642 FLGP20930 4061 aaPredicted RBP6.54□□□□□ -1.36
HLA-DPA1-246ENST00000476642 H1FX-AS1Q4G0G2 97 aa6.54□□□□□ -1.36
HLA-DPA1-246ENST00000476642 PMAIP1Q13794 54 aa6.5□□□□□ -1.37
HLA-DPA1-246ENST00000476642 LINC00208Q96KT6 92 aa6.5□□□□□ -1.37
HLA-DPA1-246ENST00000476642 SEC61GP60059 68 aa6.48□□□□□ -1.37
HLA-DPA1-246ENST00000476642 PSPHP1O15172 72 aa6.45□□□□□ -1.38
HLA-DPA1-246ENST00000476642 Q5VV11 94 aa6.42□□□□□ -1.38
HLA-DPA1-246ENST00000476642 A8MUN3 132 aa6.41□□□□□ -1.38
HLA-DPA1-246ENST00000476642 CHKB-CPT1BH3BT56 60 aa6.4□□□□□ -1.38
HLA-DPA1-246ENST00000476642 KRTAP3-1Q9BYR8 98 aa6.39□□□□□ -1.39
HLA-DPA1-246ENST00000476642 PRR15LQ9BU68 103 aa6.38□□□□□ -1.39
HLA-DPA1-246ENST00000476642 S4R3F8 94 aa6.38□□□□□ -1.39
HLA-DPA1-246ENST00000476642 COA5Q86WW8 74 aa6.37□□□□□ -1.39
HLA-DPA1-246ENST00000476642 KRTAP9-8Q9BYQ0 159 aa6.35□□□□□ -1.39
HLA-DPA1-246ENST00000476642 KTN1-AS1Q86SY8 53 aa6.34□□□□□ -1.39
HLA-DPA1-246ENST00000476642 LINC01558Q9Y6Z2 57 aa6.34□□□□□ -1.39
HLA-DPA1-246ENST00000476642 A6NED7 52 aa6.33□□□□□ -1.4
HLA-DPA1-246ENST00000476642 CSAG1Q6PB30 78 aa6.32□□□□□ -1.4
HLA-DPA1-246ENST00000476642 CDC42SE1Q9NRR8 79 aa6.32□□□□□ -1.4
HLA-DPA1-246ENST00000476642 KRTAP9-7A8MTY7 169 aa6.31□□□□□ -1.4
HLA-DPA1-246ENST00000476642 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.31□□□□□ -1.4
HLA-DPA1-246ENST00000476642 LCA10Q71F78 164 aa6.3□□□□□ -1.4
HLA-DPA1-246ENST00000476642 MT2AP02795 61 aa6.29□□□□□ -1.4
HLA-DPA1-246ENST00000476642 KRTAP10-10P60014 251 aa6.28□□□□□ -1.4
HLA-DPA1-246ENST00000476642 SPTSSBQ8NFR3 76 aa6.25□□□□□ -1.41
HLA-DPA1-246ENST00000476642 DMAC1Q96GE9 116 aa6.24□□□□□ -1.41
HLA-DPA1-246ENST00000476642 USH2AO75445 5202 aa6.23□□□□□ -1.41
HLA-DPA1-246ENST00000476642 A6NN06 94 aa6.23□□□□□ -1.41
HLA-DPA1-246ENST00000476642 MT1FP04733 61 aa6.23□□□□□ -1.41
HLA-DPA1-246ENST00000476642 SSPOA2VEC9 5147 aa6.22□□□□□ -1.41
HLA-DPA1-246ENST00000476642 ACYP2P14621 99 aa6.19□□□□□ -1.42
HLA-DPA1-246ENST00000476642 KRTAP19-1Q8IUB9 90 aa6.15□□□□□ -1.42
HLA-DPA1-246ENST00000476642 KRTAP9-3Q9BYQ3 159 aa6.14□□□□□ -1.43
HLA-DPA1-246ENST00000476642 A8MU10 97 aa6.13□□□□□ -1.43
HLA-DPA1-246ENST00000476642 H0YAA0 97 aa6.12□□□□□ -1.43
HLA-DPA1-246ENST00000476642 FCGBPQ9Y6R7 5405 aaPredicted RBP6.11□□□□□ -1.43
HLA-DPA1-246ENST00000476642 CRIPTQ9P021 101 aa6.07□□□□□ -1.44
HLA-DPA1-246ENST00000476642 A0A1B0GU69 56 aa6.05□□□□□ -1.44
HLA-DPA1-246ENST00000476642 SPATA8Q6RVD6 105 aa6.01□□□□□ -1.45
HLA-DPA1-246ENST00000476642 ADM2Q7Z4H4 148 aa6.01□□□□□ -1.45
HLA-DPA1-246ENST00000476642 UQCR11O14957 56 aa6□□□□□ -1.45
HLA-DPA1-246ENST00000476642 KRTAP19-6Q3LI70 58 aa5.98□□□□□ -1.45
HLA-DPA1-246ENST00000476642 SYNE2Q8WXH0 6885 aaKnown RBP5.97□□□□□ -1.45
HLA-DPA1-246ENST00000476642 SPRR2GQ9BYE4 73 aa5.97□□□□□ -1.45
HLA-DPA1-246ENST00000476642 MACF1Q9UPN3 7388 aaKnown RBP5.97□□□□□ -1.45
HLA-DPA1-246ENST00000476642 MIR22HGQ0VDD5 57 aa5.96□□□□□ -1.46
HLA-DPA1-246ENST00000476642 R4GN34 69 aa5.89□□□□□ -1.47
HLA-DPA1-246ENST00000476642 LINC01554Q52M75 96 aa5.88□□□□□ -1.47
HLA-DPA1-246ENST00000476642 P0C880 135 aa5.87□□□□□ -1.47
HLA-DPA1-246ENST00000476642 KRTAP19-8Q3LI54 63 aa5.87□□□□□ -1.47
HLA-DPA1-246ENST00000476642 KRTAP6-3Q3LI67 103 aa5.84□□□□□ -1.47
HLA-DPA1-246ENST00000476642 M0QZ58 72 aa5.82□□□□□ -1.48
HLA-DPA1-246ENST00000476642 PRAC1Q96KF2 57 aa5.8□□□□□ -1.48
HLA-DPA1-246ENST00000476642 MT1BP07438 61 aa5.79□□□□□ -1.48
HLA-DPA1-246ENST00000476642 PLAC4Q8WY50 150 aa5.74□□□□□ -1.49
HLA-DPA1-246ENST00000476642 K7ERS5 55 aa5.69□□□□□ -1.5
HLA-DPA1-246ENST00000476642 A0A1B0GU33 70 aa5.65□□□□□ -1.5
HLA-DPA1-246ENST00000476642 KRTAP10-5P60370 271 aa5.65□□□□□ -1.5
HLA-DPA1-246ENST00000476642 PRO2289Q9P1D8 64 aa5.65□□□□□ -1.5
HLA-DPA1-246ENST00000476642 NEBP20929 6669 aa5.65□□□□□ -1.51
HLA-DPA1-246ENST00000476642 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
HLA-DPA1-246ENST00000476642 KRTAP4-6Q9BYQ5 205 aa5.64□□□□□ -1.51
HLA-DPA1-246ENST00000476642 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
HLA-DPA1-246ENST00000476642 KRTAP13-4Q3LI77 160 aa5.56□□□□□ -1.52
HLA-DPA1-246ENST00000476642 KRTAP20-1Q3LI63 56 aa5.54□□□□□ -1.52
HLA-DPA1-246ENST00000476642 H3BS24 57 aa5.51□□□□□ -1.53
HLA-DPA1-246ENST00000476642 MT1XP80297 61 aa5.5□□□□□ -1.53
HLA-DPA1-246ENST00000476642 MUC12Q9UKN1 5478 aa5.49□□□□□ -1.53
HLA-DPA1-246ENST00000476642 A0A0D9SG42 100 aa5.48□□□□□ -1.53
HLA-DPA1-246ENST00000476642 ROMO1P60602 79 aa5.48□□□□□ -1.53
HLA-DPA1-246ENST00000476642 CAMK2N1Q7Z7J9 78 aa5.47□□□□□ -1.53
HLA-DPA1-246ENST00000476642 KRTAP5-9P26371 169 aa5.45□□□□□ -1.54
HLA-DPA1-246ENST00000476642 SPINT4Q6UDR6 99 aa5.42□□□□□ -1.54
HLA-DPA1-246ENST00000476642 KRTAP12-2P59991 146 aa5.39□□□□□ -1.55
HLA-DPA1-246ENST00000476642 KMT2DO14686 5537 aa5.37□□□□□ -1.55
HLA-DPA1-246ENST00000476642 KRTAP12-1P59990 96 aa5.37□□□□□ -1.55
HLA-DPA1-246ENST00000476642 KRTAP2-3P0C7H8 128 aa5.33□□□□□ -1.56
HLA-DPA1-246ENST00000476642 KRTAP2-4Q9BYR9 128 aa5.33□□□□□ -1.56
HLA-DPA1-246ENST00000476642 MDN1Q9NU22 5596 aa5.32□□□□□ -1.56
HLA-DPA1-246ENST00000476642 SPRR2FQ96RM1 72 aa5.3□□□□□ -1.56
HLA-DPA1-246ENST00000476642 SPRR2EP22531 72 aa5.28□□□□□ -1.56
HLA-DPA1-246ENST00000476642 SPRR2BP35325 72 aa5.28□□□□□ -1.56
HLA-DPA1-246ENST00000476642 SPRR2AP35326 72 aa5.28□□□□□ -1.56
HLA-DPA1-246ENST00000476642 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
HLA-DPA1-246ENST00000476642 KRTAP10-7P60409 375 aaPredicted RBP5.25□□□□□ -1.57
HLA-DPA1-246ENST00000476642 KRTAP8-1Q8IUC2 63 aa5.23□□□□□ -1.57
HLA-DPA1-246ENST00000476642 KRTAP4-8Q9BYQ9 185 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms