RNA–Protein interactions for RNA: ENST00000476477.6

ECHDC2-208, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 2

Gene ECHDC2, Length 1,676 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-208ENST00000476477 BRK1Q8WUW1 75 aa9□□□□□ -0.97
ECHDC2-208ENST00000476477 KRTAP4-1Q9BYQ7 146 aa8.98□□□□□ -0.97
ECHDC2-208ENST00000476477 HERC1Q15751 4861 aa8.96□□□□□ -0.97
ECHDC2-208ENST00000476477 LCA10Q71F78 164 aa8.96□□□□□ -0.98
ECHDC2-208ENST00000476477 KRTAP3-3Q9BYR6 98 aa8.96□□□□□ -0.98
ECHDC2-208ENST00000476477 H1FX-AS1Q4G0G2 97 aa8.95□□□□□ -0.98
ECHDC2-208ENST00000476477 RBM12B-AS1Q9P1G2 102 aa8.94□□□□□ -0.98
ECHDC2-208ENST00000476477 S4R3F8 94 aa8.94□□□□□ -0.98
ECHDC2-208ENST00000476477 HMCN2Q8NDA2 5059 aa8.94□□□□□ -0.98
ECHDC2-208ENST00000476477 A6NED7 52 aa8.94□□□□□ -0.98
ECHDC2-208ENST00000476477 A8MU10 97 aa8.9□□□□□ -0.98
ECHDC2-208ENST00000476477 PRO0628Q9UI54 55 aa8.86□□□□□ -0.99
ECHDC2-208ENST00000476477 SEC61GP60059 68 aa8.85□□□□□ -0.99
ECHDC2-208ENST00000476477 CDC42SE1Q9NRR8 79 aa8.8□□□□□ -1
ECHDC2-208ENST00000476477 KRTAP19-2Q3LHN2 52 aa8.75□□□□□ -1.01
ECHDC2-208ENST00000476477 UQCR11O14957 56 aa8.75□□□□□ -1.01
ECHDC2-208ENST00000476477 SPATA8Q6RVD6 105 aa8.71□□□□□ -1.02
ECHDC2-208ENST00000476477 MIR22HGQ0VDD5 57 aa8.7□□□□□ -1.02
ECHDC2-208ENST00000476477 KRTAP3-2Q9BYR7 98 aa8.7□□□□□ -1.02
ECHDC2-208ENST00000476477 KRTAP10-6P60371 365 aaPredicted RBP8.69□□□□□ -1.02
ECHDC2-208ENST00000476477 CSAG1Q6PB30 78 aa8.69□□□□□ -1.02
ECHDC2-208ENST00000476477 A0A1B0GU33 70 aa8.68□□□□□ -1.02
ECHDC2-208ENST00000476477 H0YAA0 97 aa8.62□□□□□ -1.03
ECHDC2-208ENST00000476477 P0C880 135 aa8.61□□□□□ -1.03
ECHDC2-208ENST00000476477 ADM2Q7Z4H4 148 aa8.6□□□□□ -1.03
ECHDC2-208ENST00000476477 MUC2Q02817 5179 aa8.6□□□□□ -1.03
ECHDC2-208ENST00000476477 SVIPQ8NHG7 77 aa8.56□□□□□ -1.04
ECHDC2-208ENST00000476477 FLGP20930 4061 aaPredicted RBP8.55□□□□□ -1.04
ECHDC2-208ENST00000476477 KRTAP13-4Q3LI77 160 aa8.52□□□□□ -1.05
ECHDC2-208ENST00000476477 RNF213Q63HN8 5207 aa8.5□□□□□ -1.05
ECHDC2-208ENST00000476477 PMAIP1Q13794 54 aa8.49□□□□□ -1.05
ECHDC2-208ENST00000476477 A6NN06 94 aa8.46□□□□□ -1.06
ECHDC2-208ENST00000476477 LCE2CQ5TA81 110 aa8.46□□□□□ -1.06
ECHDC2-208ENST00000476477 UBR4Q5T4S7 5183 aa8.44□□□□□ -1.06
ECHDC2-208ENST00000476477 A0A0D9SG42 100 aa8.36□□□□□ -1.07
ECHDC2-208ENST00000476477 LORP23490 312 aaPredicted RBP8.32□□□□□ -1.08
ECHDC2-208ENST00000476477 M0QZ58 72 aa8.3□□□□□ -1.08
ECHDC2-208ENST00000476477 FAT4Q6V0I7 4981 aa8.28□□□□□ -1.08
ECHDC2-208ENST00000476477 MT1HP80294 61 aa8.25□□□□□ -1.09
ECHDC2-208ENST00000476477 R4GN34 69 aa8.23□□□□□ -1.09
ECHDC2-208ENST00000476477 K7ERS5 55 aa8.2□□□□□ -1.1
ECHDC2-208ENST00000476477 KTN1-AS1Q86SY8 53 aa8.19□□□□□ -1.1
ECHDC2-208ENST00000476477 KRTAP12-1P59990 96 aa8.17□□□□□ -1.1
ECHDC2-208ENST00000476477 KRTAP12-2P59991 146 aa8.17□□□□□ -1.1
ECHDC2-208ENST00000476477 M0R2T5 61 aa8.16□□□□□ -1.1
ECHDC2-208ENST00000476477 LINC01554Q52M75 96 aa8.14□□□□□ -1.11
ECHDC2-208ENST00000476477 SPINT4Q6UDR6 99 aa8.12□□□□□ -1.11
ECHDC2-208ENST00000476477 PRAC1Q96KF2 57 aa8.03□□□□□ -1.12
ECHDC2-208ENST00000476477 CRIPTQ9P021 101 aa8.02□□□□□ -1.13
ECHDC2-208ENST00000476477 MT2AP02795 61 aa7.99□□□□□ -1.13
ECHDC2-208ENST00000476477 KRTAP9-8Q9BYQ0 159 aa7.98□□□□□ -1.13
ECHDC2-208ENST00000476477 MT1FP04733 61 aa7.96□□□□□ -1.13
ECHDC2-208ENST00000476477 ROMO1P60602 79 aa7.95□□□□□ -1.14
ECHDC2-208ENST00000476477 KRTAP10-10P60014 251 aa7.9□□□□□ -1.14
ECHDC2-208ENST00000476477 KRTAP19-1Q8IUB9 90 aa7.88□□□□□ -1.15
ECHDC2-208ENST00000476477 SPRR2GQ9BYE4 73 aa7.88□□□□□ -1.15
ECHDC2-208ENST00000476477 LCE2AQ5TA79 106 aaPredicted RBP7.76□□□□□ -1.17
ECHDC2-208ENST00000476477 C10orf95Q9H7T3 257 aa7.74□□□□□ -1.17
ECHDC2-208ENST00000476477 CAMK2N1Q7Z7J9 78 aa7.73□□□□□ -1.17
ECHDC2-208ENST00000476477 KRTAP25-1Q3LHN0 102 aa7.73□□□□□ -1.17
ECHDC2-208ENST00000476477 KRTAP9-3Q9BYQ3 159 aa7.69□□□□□ -1.18
ECHDC2-208ENST00000476477 KRTAP19-8Q3LI54 63 aa7.66□□□□□ -1.18
ECHDC2-208ENST00000476477 PLAC4Q8WY50 150 aa7.65□□□□□ -1.18
ECHDC2-208ENST00000476477 MT1BP07438 61 aa7.58□□□□□ -1.2
ECHDC2-208ENST00000476477 LCE2BO14633 110 aa7.47□□□□□ -1.21
ECHDC2-208ENST00000476477 TNP1P09430 55 aa7.38□□□□□ -1.23
ECHDC2-208ENST00000476477 MT1XP80297 61 aa7.38□□□□□ -1.23
ECHDC2-208ENST00000476477 KRTAP10-5P60370 271 aa7.36□□□□□ -1.23
ECHDC2-208ENST00000476477 USH2AO75445 5202 aa7.24□□□□□ -1.25
ECHDC2-208ENST00000476477 PP632Q6XCG6 107 aa7.23□□□□□ -1.25
ECHDC2-208ENST00000476477 KRTAP23-1A1A580 65 aa7.17□□□□□ -1.26
ECHDC2-208ENST00000476477 PRO2289Q9P1D8 64 aa7.16□□□□□ -1.26
ECHDC2-208ENST00000476477 KRTAP10-7P60409 375 aaPredicted RBP7.12□□□□□ -1.27
ECHDC2-208ENST00000476477 LCE3AQ5TA76 89 aa7.11□□□□□ -1.27
ECHDC2-208ENST00000476477 KRTAP10-12P60413 245 aa7.03□□□□□ -1.28
ECHDC2-208ENST00000476477 SSPOA2VEC9 5147 aa6.98□□□□□ -1.29
ECHDC2-208ENST00000476477 LCE2DQ5TA82 110 aaPredicted RBP6.94□□□□□ -1.3
ECHDC2-208ENST00000476477 KRTAP8-1Q8IUC2 63 aa6.92□□□□□ -1.3
ECHDC2-208ENST00000476477 KRTAP19-6Q3LI70 58 aa6.9□□□□□ -1.3
ECHDC2-208ENST00000476477 KRTAP15-1Q3LI76 137 aa6.9□□□□□ -1.3
ECHDC2-208ENST00000476477 KRTAP9-2Q9BYQ4 174 aa6.9□□□□□ -1.3
ECHDC2-208ENST00000476477 KRTAP4-8A0A0G2JLE6 195 aa6.8□□□□□ -1.32
ECHDC2-208ENST00000476477 KRTAP4-8Q9BYQ9 185 aa6.8□□□□□ -1.32
ECHDC2-208ENST00000476477 KRTAP12-3P60328 96 aa6.77□□□□□ -1.32
ECHDC2-208ENST00000476477 KMT2DO14686 5537 aa6.76□□□□□ -1.33
ECHDC2-208ENST00000476477 KRTAP19-5Q3LI72 72 aa6.72□□□□□ -1.33
ECHDC2-208ENST00000476477 FSIP2Q5CZC0 6907 aa6.71□□□□□ -1.34
ECHDC2-208ENST00000476477 KRTAP9-6A0A140TA67 174 aa6.65□□□□□ -1.34
ECHDC2-208ENST00000476477 FCGBPQ9Y6R7 5405 aaPredicted RBP6.6□□□□□ -1.35
ECHDC2-208ENST00000476477 KRTAP19-7Q3SYF9 63 aa6.58□□□□□ -1.36
ECHDC2-208ENST00000476477 SPRR5A0A1B0GTR4 108 aa6.55□□□□□ -1.36
ECHDC2-208ENST00000476477 CRCT1Q9UGL9 99 aa6.48□□□□□ -1.37
ECHDC2-208ENST00000476477 NDUFAF8A1L188 74 aa6.45□□□□□ -1.38
ECHDC2-208ENST00000476477 MT1EP04732 61 aa6.44□□□□□ -1.38
ECHDC2-208ENST00000476477 LUZP6Q538Z0 58 aa6.36□□□□□ -1.39
ECHDC2-208ENST00000476477 LCE3CQ5T5A8 94 aa6.35□□□□□ -1.39
ECHDC2-208ENST00000476477 MT1LQ93083 61 aa6.35□□□□□ -1.39
ECHDC2-208ENST00000476477 KRTAP4-7Q9BYR0 210 aa6.24□□□□□ -1.41
ECHDC2-208ENST00000476477 MACF1Q9UPN3 7388 aaKnown RBP6.21□□□□□ -1.42
ECHDC2-208ENST00000476477 KRTAP19-4Q3LI73 84 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms