RNA–Protein interactions for RNA: ENST00000476408.1

CD53-204, Transcript of CD53 molecule, humanhuman

TSL 5

Gene CD53, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-204ENST00000476408 Q6ZSA8 131 aa3.84□□□□□ -1.79
CD53-204ENST00000476408 Q8N1X5 172 aa3.84□□□□□ -1.79
CD53-204ENST00000476408 KRTAP4-9Q9BYQ8 210 aa3.84□□□□□ -1.79
CD53-204ENST00000476408 VPS13DQ5THJ4 4388 aa3.84□□□□□ -1.8
CD53-204ENST00000476408 DYNC1H1Q14204 4646 aaKnown RBP3.83□□□□□ -1.8
CD53-204ENST00000476408 DNAH11Q96DT5 4516 aa3.82□□□□□ -1.8
CD53-204ENST00000476408 FAT2Q9NYQ8 4349 aa3.82□□□□□ -1.8
CD53-204ENST00000476408 KRTAP13-2Q52LG2 175 aa3.82□□□□□ -1.8
CD53-204ENST00000476408 C1orf134Q5TEV5 83 aa3.82□□□□□ -1.8
CD53-204ENST00000476408 ADM2Q7Z4H4 148 aa3.82□□□□□ -1.8
CD53-204ENST00000476408 DNAH6Q9C0G6 4158 aa3.82□□□□□ -1.8
CD53-204ENST00000476408 DNAH8Q96JB1 4490 aa3.82□□□□□ -1.8
CD53-204ENST00000476408 DNAH17Q9UFH2 4485 aa3.82□□□□□ -1.8
CD53-204ENST00000476408 KRTAP25-1Q3LHN0 102 aa3.81□□□□□ -1.8
CD53-204ENST00000476408 CSAG1Q6PB30 78 aa3.81□□□□□ -1.8
CD53-204ENST00000476408 PKD1P98161 4303 aa3.8□□□□□ -1.8
CD53-204ENST00000476408 DNAH2Q9P225 4427 aa3.8□□□□□ -1.8
CD53-204ENST00000476408 KRTAP1-4P0C5Y4 121 aa3.79□□□□□ -1.8
CD53-204ENST00000476408 KRTAP4-2Q9BYR5 136 aa3.79□□□□□ -1.8
CD53-204ENST00000476408 FLG2Q5D862 2391 aaPredicted RBP3.78□□□□□ -1.8
CD53-204ENST00000476408 K7ERS5 55 aa3.78□□□□□ -1.8
CD53-204ENST00000476408 C20orf166-AS1Q96NR2 134 aa3.78□□□□□ -1.8
CD53-204ENST00000476408 A0A1B0GU33 70 aa3.77□□□□□ -1.81
CD53-204ENST00000476408 H0YAA0 97 aa3.77□□□□□ -1.81
CD53-204ENST00000476408 H1FX-AS1Q4G0G2 97 aa3.76□□□□□ -1.81
CD53-204ENST00000476408 COX6B2Q6YFQ2 88 aa3.75□□□□□ -1.81
CD53-204ENST00000476408 LINC00304Q8N9R0 145 aa3.75□□□□□ -1.81
CD53-204ENST00000476408 MYCBP2O75592 4640 aa3.75□□□□□ -1.81
CD53-204ENST00000476408 ROMO1P60602 79 aa3.74□□□□□ -1.81
CD53-204ENST00000476408 HMCN2Q8NDA2 5059 aa3.74□□□□□ -1.81
CD53-204ENST00000476408 APOBP04114 4563 aaKnown RBP3.73□□□□□ -1.81
CD53-204ENST00000476408 TYMSOSQ8TAI1 123 aa3.72□□□□□ -1.81
CD53-204ENST00000476408 KRTAP10-2P60368 255 aa3.71□□□□□ -1.82
CD53-204ENST00000476408 Q5VSD8 79 aa3.71□□□□□ -1.82
CD53-204ENST00000476408 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
CD53-204ENST00000476408 RNF213Q63HN8 5207 aa3.68□□□□□ -1.82
CD53-204ENST00000476408 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
CD53-204ENST00000476408 LRP1BQ9NZR2 4599 aa3.68□□□□□ -1.82
CD53-204ENST00000476408 KRTAP3-1Q9BYR8 98 aa3.67□□□□□ -1.82
CD53-204ENST00000476408 SMR3BP02814 79 aaPredicted RBP3.66□□□□□ -1.82
CD53-204ENST00000476408 KRTAP10-1P60331 282 aa3.65□□□□□ -1.83
CD53-204ENST00000476408 RPL37P61927 97 aaKnown RBP3.65□□□□□ -1.83
CD53-204ENST00000476408 DNAH5Q8TE73 4624 aa3.63□□□□□ -1.83
CD53-204ENST00000476408 FAT1Q14517 4588 aa3.6□□□□□ -1.83
CD53-204ENST00000476408 VPS13BQ7Z7G8 4022 aa3.59□□□□□ -1.83
CD53-204ENST00000476408 KRTAP10-6P60371 365 aaPredicted RBP3.57□□□□□ -1.84
CD53-204ENST00000476408 KRTAP9-7A8MTY7 169 aa3.55□□□□□ -1.84
CD53-204ENST00000476408 P0C880 135 aa3.53□□□□□ -1.84
CD53-204ENST00000476408 LRP2P98164 4655 aa3.53□□□□□ -1.84
CD53-204ENST00000476408 KRTAP10-4P60372 401 aaPredicted RBP3.52□□□□□ -1.85
CD53-204ENST00000476408 LCE5AQ5TCM9 118 aa3.52□□□□□ -1.85
CD53-204ENST00000476408 FAT4Q6V0I7 4981 aa3.52□□□□□ -1.85
CD53-204ENST00000476408 CRIPTQ9P021 101 aa3.51□□□□□ -1.85
CD53-204ENST00000476408 PKHD1L1Q86WI1 4243 aa3.5□□□□□ -1.85
CD53-204ENST00000476408 MUC2Q02817 5179 aa3.5□□□□□ -1.85
CD53-204ENST00000476408 M0QZ58 72 aa3.5□□□□□ -1.85
CD53-204ENST00000476408 KRTAP15-1Q3LI76 137 aa3.5□□□□□ -1.85
CD53-204ENST00000476408 C9orf92A6NGG3 77 aa3.49□□□□□ -1.85
CD53-204ENST00000476408 S4R3F8 94 aa3.49□□□□□ -1.85
CD53-204ENST00000476408 TPRXLQ17RH7 258 aa3.48□□□□□ -1.85
CD53-204ENST00000476408 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
CD53-204ENST00000476408 LRP1Q07954 4544 aaKnown RBP3.47□□□□□ -1.85
CD53-204ENST00000476408 SPINT4Q6UDR6 99 aa3.47□□□□□ -1.85
CD53-204ENST00000476408 KRTAP13-4Q3LI77 160 aa3.46□□□□□ -1.86
CD53-204ENST00000476408 FSIP2Q5CZC0 6907 aa3.46□□□□□ -1.86
CD53-204ENST00000476408 MT1HL1P0DM35 61 aa3.45□□□□□ -1.86
CD53-204ENST00000476408 KRTAP19-4Q3LI73 84 aa3.43□□□□□ -1.86
CD53-204ENST00000476408 KRTAP12-1P59990 96 aa3.42□□□□□ -1.86
CD53-204ENST00000476408 KRTAP10-8P60410 259 aa3.42□□□□□ -1.86
CD53-204ENST00000476408 KRTAP9-3Q9BYQ3 159 aa3.42□□□□□ -1.86
CD53-204ENST00000476408 FAT3Q8TDW7 4589 aa3.41□□□□□ -1.86
CD53-204ENST00000476408 KRTAP12-2P59991 146 aa3.39□□□□□ -1.87
CD53-204ENST00000476408 A0A0D9SG42 100 aa3.37□□□□□ -1.87
CD53-204ENST00000476408 CRCT1Q9UGL9 99 aa3.37□□□□□ -1.87
CD53-204ENST00000476408 TNXBP22105 4242 aa3.36□□□□□ -1.87
CD53-204ENST00000476408 KRTAP9-8Q9BYQ0 159 aa3.36□□□□□ -1.87
CD53-204ENST00000476408 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
CD53-204ENST00000476408 PP632Q6XCG6 107 aa3.35□□□□□ -1.87
CD53-204ENST00000476408 C10orf95Q9H7T3 257 aa3.33□□□□□ -1.88
CD53-204ENST00000476408 CAMK2N1Q7Z7J9 78 aa3.29□□□□□ -1.88
CD53-204ENST00000476408 PLAC4Q8WY50 150 aa3.26□□□□□ -1.89
CD53-204ENST00000476408 LPAP08519 4548 aa3.23□□□□□ -1.89
CD53-204ENST00000476408 R4GN34 69 aa3.23□□□□□ -1.89
CD53-204ENST00000476408 LUZP6Q538Z0 58 aa3.19□□□□□ -1.9
CD53-204ENST00000476408 SPRR5A0A1B0GTR4 108 aa3.15□□□□□ -1.91
CD53-204ENST00000476408 TNP1P09430 55 aa3.07□□□□□ -1.92
CD53-204ENST00000476408 KRTAP19-2Q3LHN2 52 aa3.04□□□□□ -1.92
CD53-204ENST00000476408 SYNE2Q8WXH0 6885 aaKnown RBP3.04□□□□□ -1.92
CD53-204ENST00000476408 MACF1Q9UPN3 7388 aaKnown RBP3.03□□□□□ -1.92
CD53-204ENST00000476408 SSPOA2VEC9 5147 aa3.01□□□□□ -1.93
CD53-204ENST00000476408 MUC17Q685J3 4493 aa3□□□□□ -1.93
CD53-204ENST00000476408 KRTAP4-1Q9BYQ7 146 aa3□□□□□ -1.93
CD53-204ENST00000476408 MT1HP80294 61 aa2.96□□□□□ -1.94
CD53-204ENST00000476408 INE1O15225 51 aa2.95□□□□□ -1.94
CD53-204ENST00000476408 PRO2289Q9P1D8 64 aa2.95□□□□□ -1.94
CD53-204ENST00000476408 SPRR2GQ9BYE4 73 aa2.93□□□□□ -1.94
CD53-204ENST00000476408 FCGBPQ9Y6R7 5405 aaPredicted RBP2.92□□□□□ -1.94
CD53-204ENST00000476408 M0R2T5 61 aa2.92□□□□□ -1.94
CD53-204ENST00000476408 USH2AO75445 5202 aa2.92□□□□□ -1.94
CD53-204ENST00000476408 NEBP20929 6669 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms