RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 ACYP2P14621 99 aa9.72□□□□□ -0.85
ATG4B-217ENST00000475693 C20orf166-AS1Q96NR2 134 aa9.71□□□□□ -0.85
ATG4B-217ENST00000475693 A8MUU9 505 aa9.71□□□□□ -0.86
ATG4B-217ENST00000475693 DMAC1Q96GE9 116 aa9.67□□□□□ -0.86
ATG4B-217ENST00000475693 SPINK7P58062 85 aa9.65□□□□□ -0.86
ATG4B-217ENST00000475693 RPL37P61927 97 aaKnown RBP9.63□□□□□ -0.87
ATG4B-217ENST00000475693 C7orf65Q6ZTY9 151 aa9.62□□□□□ -0.87
ATG4B-217ENST00000475693 MUC2Q02817 5179 aa9.58□□□□□ -0.88
ATG4B-217ENST00000475693 IGKV2-30P06310 120 aa9.58□□□□□ -0.88
ATG4B-217ENST00000475693 H3BS24 57 aa9.56□□□□□ -0.88
ATG4B-217ENST00000475693 UBR4Q5T4S7 5183 aa9.55□□□□□ -0.88
ATG4B-217ENST00000475693 IGKV2D-30A0A075B6S6 120 aa9.52□□□□□ -0.89
ATG4B-217ENST00000475693 A0A1B0GU69 56 aa9.47□□□□□ -0.89
ATG4B-217ENST00000475693 MUC17Q685J3 4493 aa9.45□□□□□ -0.9
ATG4B-217ENST00000475693 RNF213Q63HN8 5207 aa9.45□□□□□ -0.9
ATG4B-217ENST00000475693 SPATA8Q6RVD6 105 aa9.44□□□□□ -0.9
ATG4B-217ENST00000475693 KRTAP4-1Q9BYQ7 146 aa9.43□□□□□ -0.9
ATG4B-217ENST00000475693 SEC61BP60468 96 aaKnown RBP9.39□□□□□ -0.91
ATG4B-217ENST00000475693 UQCR11O14957 56 aa9.37□□□□□ -0.91
ATG4B-217ENST00000475693 MIR22HGQ0VDD5 57 aa9.32□□□□□ -0.92
ATG4B-217ENST00000475693 LINC01554Q52M75 96 aa9.27□□□□□ -0.93
ATG4B-217ENST00000475693 A0A0A0MQY5 61 aa9.22□□□□□ -0.93
ATG4B-217ENST00000475693 PRAC1Q96KF2 57 aa9.2□□□□□ -0.94
ATG4B-217ENST00000475693 KRTAP3-1Q9BYR8 98 aa9.19□□□□□ -0.94
ATG4B-217ENST00000475693 FAT4Q6V0I7 4981 aa9.15□□□□□ -0.94
ATG4B-217ENST00000475693 COX6B2Q6YFQ2 88 aa9.1□□□□□ -0.95
ATG4B-217ENST00000475693 ADM2Q7Z4H4 148 aa9.1□□□□□ -0.95
ATG4B-217ENST00000475693 KRTAP19-2Q3LHN2 52 aa9.06□□□□□ -0.96
ATG4B-217ENST00000475693 H0YAA0 97 aa8.95□□□□□ -0.98
ATG4B-217ENST00000475693 LCE2CQ5TA81 110 aa8.95□□□□□ -0.98
ATG4B-217ENST00000475693 FLGP20930 4061 aaPredicted RBP8.94□□□□□ -0.98
ATG4B-217ENST00000475693 H1FX-AS1Q4G0G2 97 aa8.93□□□□□ -0.98
ATG4B-217ENST00000475693 A0A1B0GU33 70 aa8.92□□□□□ -0.98
ATG4B-217ENST00000475693 CSAG1Q6PB30 78 aa8.92□□□□□ -0.98
ATG4B-217ENST00000475693 KRTAP3-3Q9BYR6 98 aa8.85□□□□□ -0.99
ATG4B-217ENST00000475693 S4R3F8 94 aa8.85□□□□□ -0.99
ATG4B-217ENST00000475693 MT1HP80294 61 aa8.76□□□□□ -1.01
ATG4B-217ENST00000475693 KRTAP25-1Q3LHN0 102 aa8.74□□□□□ -1.01
ATG4B-217ENST00000475693 K7ERS5 55 aa8.73□□□□□ -1.01
ATG4B-217ENST00000475693 M0R2T5 61 aa8.67□□□□□ -1.02
ATG4B-217ENST00000475693 ROMO1P60602 79 aa8.66□□□□□ -1.02
ATG4B-217ENST00000475693 KRTAP10-6P60371 365 aaPredicted RBP8.57□□□□□ -1.04
ATG4B-217ENST00000475693 LCE2AQ5TA79 106 aaPredicted RBP8.52□□□□□ -1.05
ATG4B-217ENST00000475693 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
ATG4B-217ENST00000475693 P0C880 135 aa8.47□□□□□ -1.05
ATG4B-217ENST00000475693 KRTAP13-4Q3LI77 160 aa8.44□□□□□ -1.06
ATG4B-217ENST00000475693 LORP23490 312 aaPredicted RBP8.41□□□□□ -1.06
ATG4B-217ENST00000475693 KRTAP9-8Q9BYQ0 159 aa8.41□□□□□ -1.06
ATG4B-217ENST00000475693 MT2AP02795 61 aa8.37□□□□□ -1.07
ATG4B-217ENST00000475693 MT1FP04733 61 aa8.34□□□□□ -1.07
ATG4B-217ENST00000475693 CRIPTQ9P021 101 aa8.34□□□□□ -1.07
ATG4B-217ENST00000475693 A0A0D9SG42 100 aa8.33□□□□□ -1.08
ATG4B-217ENST00000475693 KRTAP10-10P60014 251 aa8.3□□□□□ -1.08
ATG4B-217ENST00000475693 M0QZ58 72 aa8.2□□□□□ -1.1
ATG4B-217ENST00000475693 KRTAP12-2P59991 146 aa8.19□□□□□ -1.1
ATG4B-217ENST00000475693 KRTAP12-1P59990 96 aa8.18□□□□□ -1.1
ATG4B-217ENST00000475693 R4GN34 69 aa8.15□□□□□ -1.1
ATG4B-217ENST00000475693 SPINT4Q6UDR6 99 aa8.1□□□□□ -1.11
ATG4B-217ENST00000475693 KRTAP19-1Q8IUB9 90 aa8.1□□□□□ -1.11
ATG4B-217ENST00000475693 KRTAP9-3Q9BYQ3 159 aa8.1□□□□□ -1.11
ATG4B-217ENST00000475693 C10orf95Q9H7T3 257 aa8.09□□□□□ -1.12
ATG4B-217ENST00000475693 KRTAP15-1Q3LI76 137 aa8.03□□□□□ -1.12
ATG4B-217ENST00000475693 NDUFAF8A1L188 74 aa8.03□□□□□ -1.12
ATG4B-217ENST00000475693 SPRR2GQ9BYE4 73 aa8.02□□□□□ -1.13
ATG4B-217ENST00000475693 USH2AO75445 5202 aa8.01□□□□□ -1.13
ATG4B-217ENST00000475693 LCE2BO14633 110 aa7.97□□□□□ -1.13
ATG4B-217ENST00000475693 FSIP2Q5CZC0 6907 aa7.96□□□□□ -1.13
ATG4B-217ENST00000475693 MT1BP07438 61 aa7.83□□□□□ -1.16
ATG4B-217ENST00000475693 KRTAP19-8Q3LI54 63 aa7.82□□□□□ -1.16
ATG4B-217ENST00000475693 SSPOA2VEC9 5147 aa7.75□□□□□ -1.17
ATG4B-217ENST00000475693 LCE2DQ5TA82 110 aaPredicted RBP7.72□□□□□ -1.17
ATG4B-217ENST00000475693 PLAC4Q8WY50 150 aa7.71□□□□□ -1.18
ATG4B-217ENST00000475693 LUZP6Q538Z0 58 aa7.7□□□□□ -1.18
ATG4B-217ENST00000475693 KRTAP9-2Q9BYQ4 174 aa7.66□□□□□ -1.18
ATG4B-217ENST00000475693 CAMK2N1Q7Z7J9 78 aa7.62□□□□□ -1.19
ATG4B-217ENST00000475693 PP632Q6XCG6 107 aa7.6□□□□□ -1.19
ATG4B-217ENST00000475693 MT1XP80297 61 aa7.54□□□□□ -1.2
ATG4B-217ENST00000475693 KRTAP10-5P60370 271 aa7.52□□□□□ -1.2
ATG4B-217ENST00000475693 FCGBPQ9Y6R7 5405 aaPredicted RBP7.42□□□□□ -1.22
ATG4B-217ENST00000475693 KRTAP19-6Q3LI70 58 aa7.4□□□□□ -1.22
ATG4B-217ENST00000475693 KRTAP23-1A1A580 65 aa7.38□□□□□ -1.23
ATG4B-217ENST00000475693 KMT2DO14686 5537 aa7.35□□□□□ -1.23
ATG4B-217ENST00000475693 PRO2289Q9P1D8 64 aa7.32□□□□□ -1.24
ATG4B-217ENST00000475693 CRCT1Q9UGL9 99 aa7.32□□□□□ -1.24
ATG4B-217ENST00000475693 KRTAP10-7P60409 375 aaPredicted RBP7.29□□□□□ -1.24
ATG4B-217ENST00000475693 TNP1P09430 55 aa7.27□□□□□ -1.25
ATG4B-217ENST00000475693 MACF1Q9UPN3 7388 aaKnown RBP7.14□□□□□ -1.27
ATG4B-217ENST00000475693 SPRR5A0A1B0GTR4 108 aa7.13□□□□□ -1.27
ATG4B-217ENST00000475693 KRTAP4-8A0A0G2JLE6 195 aa7.11□□□□□ -1.27
ATG4B-217ENST00000475693 KRTAP4-8Q9BYQ9 185 aa7.11□□□□□ -1.27
ATG4B-217ENST00000475693 KRTAP9-6A0A140TA67 174 aa7.08□□□□□ -1.28
ATG4B-217ENST00000475693 KRTAP10-12P60413 245 aa7.08□□□□□ -1.28
ATG4B-217ENST00000475693 LCE3AQ5TA76 89 aa7.02□□□□□ -1.29
ATG4B-217ENST00000475693 SYNE2Q8WXH0 6885 aaKnown RBP7.02□□□□□ -1.29
ATG4B-217ENST00000475693 KRTAP8-1Q8IUC2 63 aa6.81□□□□□ -1.32
ATG4B-217ENST00000475693 MUC12Q9UKN1 5478 aa6.8□□□□□ -1.32
ATG4B-217ENST00000475693 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.79□□□□□ -1.32
ATG4B-217ENST00000475693 KRTAP19-5Q3LI72 72 aa6.79□□□□□ -1.32
ATG4B-217ENST00000475693 KRTAP19-7Q3SYF9 63 aa6.73□□□□□ -1.33
ATG4B-217ENST00000475693 KRTAP12-3P60328 96 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms