RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 H0Y9P7 68 aa3.81□□□□□ -1.8
SHQ1-207ENST00000475558 SEC61BP60468 96 aaKnown RBP3.81□□□□□ -1.8
SHQ1-207ENST00000475558 KLKP1Q107X0 134 aa3.81□□□□□ -1.8
SHQ1-207ENST00000475558 ZCCHC13Q8WW36 166 aaKnown RBP3.81□□□□□ -1.8
SHQ1-207ENST00000475558 C1orf64Q8NEQ6 169 aa3.8□□□□□ -1.8
SHQ1-207ENST00000475558 RPL37P61927 97 aaKnown RBP3.79□□□□□ -1.8
SHQ1-207ENST00000475558 C20orf197Q8N268 126 aa3.79□□□□□ -1.8
SHQ1-207ENST00000475558 LINC00208Q96KT6 92 aa3.79□□□□□ -1.8
SHQ1-207ENST00000475558 CRCT1Q9UGL9 99 aa3.79□□□□□ -1.8
SHQ1-207ENST00000475558 Q5W150 140 aa3.76□□□□□ -1.81
SHQ1-207ENST00000475558 CCDC179H3BU77 68 aa3.75□□□□□ -1.81
SHQ1-207ENST00000475558 IGKV2-30P06310 120 aa3.75□□□□□ -1.81
SHQ1-207ENST00000475558 C7orf65Q6ZTY9 151 aa3.75□□□□□ -1.81
SHQ1-207ENST00000475558 CYP4F30PQ9H0H9 118 aa3.75□□□□□ -1.81
SHQ1-207ENST00000475558 ATP5EP56381 51 aaPredicted RBP3.74□□□□□ -1.81
SHQ1-207ENST00000475558 SPANXA2-OT1Q8N9U9 137 aa3.74□□□□□ -1.81
SHQ1-207ENST00000475558 PRO0628Q9UI54 55 aa3.74□□□□□ -1.81
SHQ1-207ENST00000475558 SNURFQ9Y675 71 aa3.73□□□□□ -1.81
SHQ1-207ENST00000475558 KRTAP23-1A1A580 65 aa3.72□□□□□ -1.81
SHQ1-207ENST00000475558 SPINK7P58062 85 aa3.72□□□□□ -1.81
SHQ1-207ENST00000475558 TMEM258P61165 79 aa3.72□□□□□ -1.81
SHQ1-207ENST00000475558 C4orf26Q17RF5 130 aa3.72□□□□□ -1.81
SHQ1-207ENST00000475558 IGKV2D-30A0A075B6S6 120 aa3.7□□□□□ -1.82
SHQ1-207ENST00000475558 A8MUN3 132 aa3.7□□□□□ -1.82
SHQ1-207ENST00000475558 H7BZZ5 65 aa3.7□□□□□ -1.82
SHQ1-207ENST00000475558 PCOTHQ58A44 107 aa3.69□□□□□ -1.82
SHQ1-207ENST00000475558 KRTAP4-1Q9BYQ7 146 aa3.68□□□□□ -1.82
SHQ1-207ENST00000475558 ACYP2P14621 99 aa3.67□□□□□ -1.82
SHQ1-207ENST00000475558 RBM12B-AS1Q9P1G2 102 aa3.67□□□□□ -1.82
SHQ1-207ENST00000475558 HRES1P13985 223 aa3.66□□□□□ -1.82
SHQ1-207ENST00000475558 FAM236DA0A1B0GTK5 79 aa3.65□□□□□ -1.83
SHQ1-207ENST00000475558 FAM236CP0DP71 79 aa3.65□□□□□ -1.83
SHQ1-207ENST00000475558 RPS28P62857 69 aaKnown RBP3.64□□□□□ -1.83
SHQ1-207ENST00000475558 COX6B2Q6YFQ2 88 aa3.64□□□□□ -1.83
SHQ1-207ENST00000475558 DMAC1Q96GE9 116 aa3.62□□□□□ -1.83
SHQ1-207ENST00000475558 MT1HP80294 61 aa3.61□□□□□ -1.83
SHQ1-207ENST00000475558 SPTSSBQ8NFR3 76 aa3.61□□□□□ -1.83
SHQ1-207ENST00000475558 SERP1Q9Y6X1 66 aa3.61□□□□□ -1.83
SHQ1-207ENST00000475558 CYSTM1Q9H1C7 97 aa3.6□□□□□ -1.83
SHQ1-207ENST00000475558 PMAIP1Q13794 54 aa3.59□□□□□ -1.83
SHQ1-207ENST00000475558 KRTAP19-2Q3LHN2 52 aa3.59□□□□□ -1.83
SHQ1-207ENST00000475558 CHKB-CPT1BH3BT56 60 aa3.58□□□□□ -1.84
SHQ1-207ENST00000475558 KRTAP10-6P60371 365 aaPredicted RBP3.58□□□□□ -1.84
SHQ1-207ENST00000475558 H1FX-AS1Q4G0G2 97 aa3.58□□□□□ -1.84
SHQ1-207ENST00000475558 MPLKIPQ8TAP9 179 aa3.58□□□□□ -1.84
SHQ1-207ENST00000475558 M0R2T5 61 aa3.56□□□□□ -1.84
SHQ1-207ENST00000475558 COA5Q86WW8 74 aa3.54□□□□□ -1.84
SHQ1-207ENST00000475558 SMIM26A0A096LP01 95 aa3.53□□□□□ -1.84
SHQ1-207ENST00000475558 FLGP20930 4061 aaPredicted RBP3.51□□□□□ -1.85
SHQ1-207ENST00000475558 CSAG1Q6PB30 78 aa3.5□□□□□ -1.85
SHQ1-207ENST00000475558 S4R3F8 94 aa3.5□□□□□ -1.85
SHQ1-207ENST00000475558 PSPHP1O15172 72 aa3.47□□□□□ -1.85
SHQ1-207ENST00000475558 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
SHQ1-207ENST00000475558 PRR15LQ9BU68 103 aa3.47□□□□□ -1.85
SHQ1-207ENST00000475558 SSPOA2VEC9 5147 aa3.47□□□□□ -1.85
SHQ1-207ENST00000475558 USH2AO75445 5202 aa3.47□□□□□ -1.85
SHQ1-207ENST00000475558 KRTAP10-7P60409 375 aaPredicted RBP3.46□□□□□ -1.86
SHQ1-207ENST00000475558 Q1T7F1 81 aa3.46□□□□□ -1.86
SHQ1-207ENST00000475558 FCGBPQ9Y6R7 5405 aaPredicted RBP3.45□□□□□ -1.86
SHQ1-207ENST00000475558 LCA10Q71F78 164 aa3.44□□□□□ -1.86
SHQ1-207ENST00000475558 LINC01558Q9Y6Z2 57 aa3.44□□□□□ -1.86
SHQ1-207ENST00000475558 MACF1Q9UPN3 7388 aaKnown RBP3.42□□□□□ -1.86
SHQ1-207ENST00000475558 H0YAA0 97 aa3.42□□□□□ -1.86
SHQ1-207ENST00000475558 LCE1AQ5T7P2 110 aa3.42□□□□□ -1.86
SHQ1-207ENST00000475558 SYNE2Q8WXH0 6885 aaKnown RBP3.41□□□□□ -1.86
SHQ1-207ENST00000475558 A0A1B0GU69 56 aa3.41□□□□□ -1.86
SHQ1-207ENST00000475558 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
SHQ1-207ENST00000475558 CRIPTQ9P021 101 aa3.35□□□□□ -1.87
SHQ1-207ENST00000475558 A0A1B0GU33 70 aa3.33□□□□□ -1.88
SHQ1-207ENST00000475558 UQCR11O14957 56 aa3.33□□□□□ -1.88
SHQ1-207ENST00000475558 KTN1-AS1Q86SY8 53 aa3.33□□□□□ -1.88
SHQ1-207ENST00000475558 PRAC1Q96KF2 57 aa3.33□□□□□ -1.88
SHQ1-207ENST00000475558 M0QZ58 72 aa3.32□□□□□ -1.88
SHQ1-207ENST00000475558 ADM2Q7Z4H4 148 aa3.32□□□□□ -1.88
SHQ1-207ENST00000475558 MT2AP02795 61 aa3.31□□□□□ -1.88
SHQ1-207ENST00000475558 Q5VV11 94 aa3.29□□□□□ -1.88
SHQ1-207ENST00000475558 KRTAP10-10P60014 251 aa3.28□□□□□ -1.88
SHQ1-207ENST00000475558 A6NED7 52 aa3.27□□□□□ -1.89
SHQ1-207ENST00000475558 MT1FP04733 61 aa3.27□□□□□ -1.89
SHQ1-207ENST00000475558 BRK1Q8WUW1 75 aa3.26□□□□□ -1.89
SHQ1-207ENST00000475558 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
SHQ1-207ENST00000475558 R4GN34 69 aa3.26□□□□□ -1.89
SHQ1-207ENST00000475558 NEBP20929 6669 aa3.25□□□□□ -1.89
SHQ1-207ENST00000475558 MIR22HGQ0VDD5 57 aa3.25□□□□□ -1.89
SHQ1-207ENST00000475558 KRTAP6-3Q3LI67 103 aa3.25□□□□□ -1.89
SHQ1-207ENST00000475558 KRTAP19-6Q3LI70 58 aa3.25□□□□□ -1.89
SHQ1-207ENST00000475558 SPATA8Q6RVD6 105 aa3.25□□□□□ -1.89
SHQ1-207ENST00000475558 P0C880 135 aa3.23□□□□□ -1.89
SHQ1-207ENST00000475558 CAMK2N1Q7Z7J9 78 aa3.23□□□□□ -1.89
SHQ1-207ENST00000475558 K7ERS5 55 aa3.22□□□□□ -1.89
SHQ1-207ENST00000475558 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
SHQ1-207ENST00000475558 CDC42SE1Q9NRR8 79 aa3.22□□□□□ -1.89
SHQ1-207ENST00000475558 LINC01554Q52M75 96 aa3.2□□□□□ -1.9
SHQ1-207ENST00000475558 A6NN06 94 aa3.19□□□□□ -1.9
SHQ1-207ENST00000475558 SPRR2GQ9BYE4 73 aa3.16□□□□□ -1.9
SHQ1-207ENST00000475558 MUC12Q9UKN1 5478 aa3.15□□□□□ -1.91
SHQ1-207ENST00000475558 PLAC4Q8WY50 150 aa3.13□□□□□ -1.91
SHQ1-207ENST00000475558 A0A0D9SG42 100 aa3.11□□□□□ -1.91
SHQ1-207ENST00000475558 KRTAP13-4Q3LI77 160 aa3.11□□□□□ -1.91
SHQ1-207ENST00000475558 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms