RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 PRR15LQ9BU68 103 aa9.96□□□□□ -0.82
SSR1-204ENST00000474597 S4R3F8 94 aa9.95□□□□□ -0.82
SSR1-204ENST00000474597 HMCN2Q8NDA2 5059 aa9.94□□□□□ -0.82
SSR1-204ENST00000474597 MUC17Q685J3 4493 aa9.92□□□□□ -0.82
SSR1-204ENST00000474597 LCA10Q71F78 164 aa9.9□□□□□ -0.82
SSR1-204ENST00000474597 A0A1B0GU69 56 aa9.86□□□□□ -0.83
SSR1-204ENST00000474597 Q5VV11 94 aa9.84□□□□□ -0.83
SSR1-204ENST00000474597 SEC61GP60059 68 aa9.82□□□□□ -0.84
SSR1-204ENST00000474597 KRTAP3-3Q9BYR6 98 aa9.82□□□□□ -0.84
SSR1-204ENST00000474597 CSAG1Q6PB30 78 aa9.7□□□□□ -0.86
SSR1-204ENST00000474597 A6NED7 52 aa9.68□□□□□ -0.86
SSR1-204ENST00000474597 KRTAP19-2Q3LHN2 52 aa9.68□□□□□ -0.86
SSR1-204ENST00000474597 BRK1Q8WUW1 75 aa9.63□□□□□ -0.87
SSR1-204ENST00000474597 MUC2Q02817 5179 aa9.58□□□□□ -0.88
SSR1-204ENST00000474597 UQCR11O14957 56 aa9.57□□□□□ -0.88
SSR1-204ENST00000474597 A0A1B0GU33 70 aa9.52□□□□□ -0.89
SSR1-204ENST00000474597 ADM2Q7Z4H4 148 aa9.51□□□□□ -0.89
SSR1-204ENST00000474597 CDC42SE1Q9NRR8 79 aa9.49□□□□□ -0.89
SSR1-204ENST00000474597 KRTAP10-6P60371 365 aaPredicted RBP9.48□□□□□ -0.89
SSR1-204ENST00000474597 KRTAP3-2Q9BYR7 98 aa9.48□□□□□ -0.89
SSR1-204ENST00000474597 MIR22HGQ0VDD5 57 aa9.47□□□□□ -0.89
SSR1-204ENST00000474597 H0YAA0 97 aa9.46□□□□□ -0.9
SSR1-204ENST00000474597 UBR4Q5T4S7 5183 aa9.45□□□□□ -0.9
SSR1-204ENST00000474597 RNF213Q63HN8 5207 aa9.44□□□□□ -0.9
SSR1-204ENST00000474597 P0C880 135 aa9.43□□□□□ -0.9
SSR1-204ENST00000474597 LCE2CQ5TA81 110 aa9.43□□□□□ -0.9
SSR1-204ENST00000474597 PRO0628Q9UI54 55 aa9.42□□□□□ -0.9
SSR1-204ENST00000474597 A8MU10 97 aa9.41□□□□□ -0.9
SSR1-204ENST00000474597 SPATA8Q6RVD6 105 aa9.41□□□□□ -0.9
SSR1-204ENST00000474597 FLGP20930 4061 aaPredicted RBP9.41□□□□□ -0.9
SSR1-204ENST00000474597 M0R2T5 61 aa9.31□□□□□ -0.92
SSR1-204ENST00000474597 MT1HP80294 61 aa9.28□□□□□ -0.92
SSR1-204ENST00000474597 KRTAP13-4Q3LI77 160 aa9.24□□□□□ -0.93
SSR1-204ENST00000474597 M0QZ58 72 aa9.21□□□□□ -0.93
SSR1-204ENST00000474597 R4GN34 69 aa9.19□□□□□ -0.94
SSR1-204ENST00000474597 FAT4Q6V0I7 4981 aa9.16□□□□□ -0.94
SSR1-204ENST00000474597 A0A0D9SG42 100 aa9.16□□□□□ -0.94
SSR1-204ENST00000474597 LORP23490 312 aaPredicted RBP9.12□□□□□ -0.95
SSR1-204ENST00000474597 PMAIP1Q13794 54 aa9.1□□□□□ -0.95
SSR1-204ENST00000474597 K7ERS5 55 aa9.08□□□□□ -0.96
SSR1-204ENST00000474597 LINC01554Q52M75 96 aa9.04□□□□□ -0.96
SSR1-204ENST00000474597 CRIPTQ9P021 101 aa9.04□□□□□ -0.96
SSR1-204ENST00000474597 A6NN06 94 aa8.98□□□□□ -0.97
SSR1-204ENST00000474597 SPINT4Q6UDR6 99 aa8.96□□□□□ -0.98
SSR1-204ENST00000474597 MT2AP02795 61 aa8.93□□□□□ -0.98
SSR1-204ENST00000474597 KRTAP9-8Q9BYQ0 159 aa8.93□□□□□ -0.98
SSR1-204ENST00000474597 KRTAP10-10P60014 251 aa8.92□□□□□ -0.98
SSR1-204ENST00000474597 KRTAP12-1P59990 96 aa8.91□□□□□ -0.98
SSR1-204ENST00000474597 KRTAP12-2P59991 146 aa8.9□□□□□ -0.98
SSR1-204ENST00000474597 MT1FP04733 61 aa8.88□□□□□ -0.99
SSR1-204ENST00000474597 LCE2AQ5TA79 106 aaPredicted RBP8.82□□□□□ -1
SSR1-204ENST00000474597 SPRR2GQ9BYE4 73 aa8.79□□□□□ -1
SSR1-204ENST00000474597 KRTAP19-1Q8IUB9 90 aa8.75□□□□□ -1.01
SSR1-204ENST00000474597 KTN1-AS1Q86SY8 53 aa8.73□□□□□ -1.01
SSR1-204ENST00000474597 ROMO1P60602 79 aa8.66□□□□□ -1.02
SSR1-204ENST00000474597 CAMK2N1Q7Z7J9 78 aa8.63□□□□□ -1.03
SSR1-204ENST00000474597 PLAC4Q8WY50 150 aa8.61□□□□□ -1.03
SSR1-204ENST00000474597 KRTAP9-3Q9BYQ3 159 aa8.61□□□□□ -1.03
SSR1-204ENST00000474597 KRTAP19-8Q3LI54 63 aa8.54□□□□□ -1.04
SSR1-204ENST00000474597 PRAC1Q96KF2 57 aa8.5□□□□□ -1.05
SSR1-204ENST00000474597 C10orf95Q9H7T3 257 aa8.43□□□□□ -1.06
SSR1-204ENST00000474597 MT1BP07438 61 aa8.42□□□□□ -1.06
SSR1-204ENST00000474597 LCE2BO14633 110 aa8.36□□□□□ -1.07
SSR1-204ENST00000474597 KRTAP25-1Q3LHN0 102 aa8.29□□□□□ -1.08
SSR1-204ENST00000474597 TNP1P09430 55 aa8.21□□□□□ -1.1
SSR1-204ENST00000474597 MT1XP80297 61 aa8.17□□□□□ -1.1
SSR1-204ENST00000474597 KRTAP10-5P60370 271 aa8.16□□□□□ -1.1
SSR1-204ENST00000474597 PRO2289Q9P1D8 64 aa8.15□□□□□ -1.1
SSR1-204ENST00000474597 USH2AO75445 5202 aa8.01□□□□□ -1.13
SSR1-204ENST00000474597 LCE2DQ5TA82 110 aaPredicted RBP8.01□□□□□ -1.13
SSR1-204ENST00000474597 PP632Q6XCG6 107 aa7.99□□□□□ -1.13
SSR1-204ENST00000474597 H3BS24 57 aa7.97□□□□□ -1.13
SSR1-204ENST00000474597 KRTAP23-1A1A580 65 aa7.93□□□□□ -1.14
SSR1-204ENST00000474597 KRTAP10-7P60409 375 aaPredicted RBP7.86□□□□□ -1.15
SSR1-204ENST00000474597 KRTAP10-12P60413 245 aa7.83□□□□□ -1.16
SSR1-204ENST00000474597 KRTAP19-6Q3LI70 58 aa7.83□□□□□ -1.16
SSR1-204ENST00000474597 LCE3AQ5TA76 89 aa7.8□□□□□ -1.16
SSR1-204ENST00000474597 SSPOA2VEC9 5147 aa7.79□□□□□ -1.16
SSR1-204ENST00000474597 FSIP2Q5CZC0 6907 aa7.69□□□□□ -1.18
SSR1-204ENST00000474597 KRTAP9-2Q9BYQ4 174 aa7.66□□□□□ -1.18
SSR1-204ENST00000474597 KRTAP8-1Q8IUC2 63 aa7.62□□□□□ -1.19
SSR1-204ENST00000474597 KRTAP4-8A0A0G2JLE6 195 aa7.52□□□□□ -1.2
SSR1-204ENST00000474597 KRTAP4-8Q9BYQ9 185 aa7.52□□□□□ -1.2
SSR1-204ENST00000474597 KRTAP12-3P60328 96 aa7.5□□□□□ -1.21
SSR1-204ENST00000474597 KRTAP19-5Q3LI72 72 aa7.43□□□□□ -1.22
SSR1-204ENST00000474597 FCGBPQ9Y6R7 5405 aaPredicted RBP7.42□□□□□ -1.22
SSR1-204ENST00000474597 KMT2DO14686 5537 aa7.42□□□□□ -1.22
SSR1-204ENST00000474597 CRCT1Q9UGL9 99 aa7.42□□□□□ -1.22
SSR1-204ENST00000474597 KRTAP15-1Q3LI76 137 aa7.37□□□□□ -1.23
SSR1-204ENST00000474597 A0A0A0MQY5 61 aa7.35□□□□□ -1.23
SSR1-204ENST00000474597 KRTAP19-7Q3SYF9 63 aa7.27□□□□□ -1.25
SSR1-204ENST00000474597 MT1EP04732 61 aa7.15□□□□□ -1.26
SSR1-204ENST00000474597 MACF1Q9UPN3 7388 aaKnown RBP7.06□□□□□ -1.28
SSR1-204ENST00000474597 SPRR5A0A1B0GTR4 108 aa7.04□□□□□ -1.28
SSR1-204ENST00000474597 KRTAP9-6A0A140TA67 174 aa7.03□□□□□ -1.28
SSR1-204ENST00000474597 MT1LQ93083 61 aa7.03□□□□□ -1.28
SSR1-204ENST00000474597 LCE3CQ5T5A8 94 aa7.01□□□□□ -1.29
SSR1-204ENST00000474597 SPRR2FQ96RM1 72 aa7.01□□□□□ -1.29
SSR1-204ENST00000474597 KRTAP19-4Q3LI73 84 aa6.99□□□□□ -1.29
SSR1-204ENST00000474597 LUZP6Q538Z0 58 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms