RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 LINC01558Q9Y6Z2 57 aa9.19□□□□□ -0.94
VARS2-206ENST00000473916 Q5VV11 94 aa9.16□□□□□ -0.94
VARS2-206ENST00000473916 KRTAP4-1Q9BYQ7 146 aa9.11□□□□□ -0.95
VARS2-206ENST00000473916 HMCN2Q8NDA2 5059 aa9.11□□□□□ -0.95
VARS2-206ENST00000473916 SEC61BP60468 96 aaKnown RBP9.1□□□□□ -0.95
VARS2-206ENST00000473916 MUC17Q685J3 4493 aa9.1□□□□□ -0.95
VARS2-206ENST00000473916 LCA10Q71F78 164 aa9.03□□□□□ -0.96
VARS2-206ENST00000473916 KRTAP3-3Q9BYR6 98 aa9.02□□□□□ -0.97
VARS2-206ENST00000473916 A0A1B0GU69 56 aa9□□□□□ -0.97
VARS2-206ENST00000473916 SPTSSBQ8NFR3 76 aa8.98□□□□□ -0.97
VARS2-206ENST00000473916 RBM12B-AS1Q9P1G2 102 aa8.98□□□□□ -0.97
VARS2-206ENST00000473916 H1FX-AS1Q4G0G2 97 aa8.98□□□□□ -0.97
VARS2-206ENST00000473916 S4R3F8 94 aa8.98□□□□□ -0.97
VARS2-206ENST00000473916 MUC2Q02817 5179 aa8.98□□□□□ -0.97
VARS2-206ENST00000473916 KTN1-AS1Q86SY8 53 aa8.97□□□□□ -0.97
VARS2-206ENST00000473916 A8MU10 97 aa8.96□□□□□ -0.98
VARS2-206ENST00000473916 A6NED7 52 aa8.92□□□□□ -0.98
VARS2-206ENST00000473916 KRTAP19-2Q3LHN2 52 aa8.84□□□□□ -0.99
VARS2-206ENST00000473916 UBR4Q5T4S7 5183 aa8.77□□□□□ -1.01
VARS2-206ENST00000473916 CDC42SE1Q9NRR8 79 aa8.75□□□□□ -1.01
VARS2-206ENST00000473916 A6NN06 94 aa8.75□□□□□ -1.01
VARS2-206ENST00000473916 KRTAP3-2Q9BYR7 98 aa8.73□□□□□ -1.01
VARS2-206ENST00000473916 UQCR11O14957 56 aa8.73□□□□□ -1.01
VARS2-206ENST00000473916 KRTAP10-6P60371 365 aaPredicted RBP8.73□□□□□ -1.01
VARS2-206ENST00000473916 CSAG1Q6PB30 78 aa8.71□□□□□ -1.02
VARS2-206ENST00000473916 RNF213Q63HN8 5207 aa8.68□□□□□ -1.02
VARS2-206ENST00000473916 A0A1B0GU33 70 aa8.68□□□□□ -1.02
VARS2-206ENST00000473916 MIR22HGQ0VDD5 57 aa8.68□□□□□ -1.02
VARS2-206ENST00000473916 P0C880 135 aa8.67□□□□□ -1.02
VARS2-206ENST00000473916 SPATA8Q6RVD6 105 aa8.66□□□□□ -1.02
VARS2-206ENST00000473916 H0YAA0 97 aa8.66□□□□□ -1.02
VARS2-206ENST00000473916 ADM2Q7Z4H4 148 aa8.64□□□□□ -1.03
VARS2-206ENST00000473916 H3BS24 57 aa8.63□□□□□ -1.03
VARS2-206ENST00000473916 FLGP20930 4061 aaPredicted RBP8.62□□□□□ -1.03
VARS2-206ENST00000473916 FAT4Q6V0I7 4981 aa8.59□□□□□ -1.03
VARS2-206ENST00000473916 KRTAP13-4Q3LI77 160 aa8.58□□□□□ -1.04
VARS2-206ENST00000473916 LCE2CQ5TA81 110 aa8.57□□□□□ -1.04
VARS2-206ENST00000473916 A0A0D9SG42 100 aa8.42□□□□□ -1.06
VARS2-206ENST00000473916 LORP23490 312 aaPredicted RBP8.42□□□□□ -1.06
VARS2-206ENST00000473916 LINC01554Q52M75 96 aa8.41□□□□□ -1.06
VARS2-206ENST00000473916 MT1HP80294 61 aa8.36□□□□□ -1.07
VARS2-206ENST00000473916 M0QZ58 72 aa8.31□□□□□ -1.08
VARS2-206ENST00000473916 PRAC1Q96KF2 57 aa8.3□□□□□ -1.08
VARS2-206ENST00000473916 R4GN34 69 aa8.28□□□□□ -1.08
VARS2-206ENST00000473916 M0R2T5 61 aa8.27□□□□□ -1.09
VARS2-206ENST00000473916 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
VARS2-206ENST00000473916 KRTAP12-1P59990 96 aa8.19□□□□□ -1.1
VARS2-206ENST00000473916 SPINT4Q6UDR6 99 aa8.16□□□□□ -1.1
VARS2-206ENST00000473916 K7ERS5 55 aa8.15□□□□□ -1.11
VARS2-206ENST00000473916 MT2AP02795 61 aa8.08□□□□□ -1.12
VARS2-206ENST00000473916 KRTAP9-8Q9BYQ0 159 aa8.08□□□□□ -1.12
VARS2-206ENST00000473916 MT1FP04733 61 aa8.07□□□□□ -1.12
VARS2-206ENST00000473916 CRIPTQ9P021 101 aa8.02□□□□□ -1.13
VARS2-206ENST00000473916 KRTAP10-10P60014 251 aa8□□□□□ -1.13
VARS2-206ENST00000473916 KRTAP19-1Q8IUB9 90 aa7.96□□□□□ -1.13
VARS2-206ENST00000473916 ROMO1P60602 79 aa7.93□□□□□ -1.14
VARS2-206ENST00000473916 SPRR2GQ9BYE4 73 aa7.93□□□□□ -1.14
VARS2-206ENST00000473916 LCE2AQ5TA79 106 aaPredicted RBP7.89□□□□□ -1.15
VARS2-206ENST00000473916 CAMK2N1Q7Z7J9 78 aa7.78□□□□□ -1.16
VARS2-206ENST00000473916 KRTAP9-3Q9BYQ3 159 aa7.77□□□□□ -1.17
VARS2-206ENST00000473916 C10orf95Q9H7T3 257 aa7.77□□□□□ -1.17
VARS2-206ENST00000473916 KRTAP25-1Q3LHN0 102 aa7.75□□□□□ -1.17
VARS2-206ENST00000473916 KRTAP19-8Q3LI54 63 aa7.69□□□□□ -1.18
VARS2-206ENST00000473916 PLAC4Q8WY50 150 aa7.67□□□□□ -1.18
VARS2-206ENST00000473916 MT1BP07438 61 aa7.65□□□□□ -1.18
VARS2-206ENST00000473916 LCE2BO14633 110 aa7.58□□□□□ -1.2
VARS2-206ENST00000473916 A0A0A0MQY5 61 aa7.56□□□□□ -1.2
VARS2-206ENST00000473916 USH2AO75445 5202 aa7.48□□□□□ -1.21
VARS2-206ENST00000473916 MT1XP80297 61 aa7.45□□□□□ -1.22
VARS2-206ENST00000473916 KRTAP10-5P60370 271 aa7.44□□□□□ -1.22
VARS2-206ENST00000473916 TNP1P09430 55 aa7.39□□□□□ -1.23
VARS2-206ENST00000473916 NDUFAF8A1L188 74 aa7.3□□□□□ -1.24
VARS2-206ENST00000473916 KRTAP15-1Q3LI76 137 aa7.25□□□□□ -1.25
VARS2-206ENST00000473916 KRTAP10-7P60409 375 aaPredicted RBP7.2□□□□□ -1.26
VARS2-206ENST00000473916 PP632Q6XCG6 107 aa7.18□□□□□ -1.26
VARS2-206ENST00000473916 PRO2289Q9P1D8 64 aa7.18□□□□□ -1.26
VARS2-206ENST00000473916 LCE3AQ5TA76 89 aa7.16□□□□□ -1.26
VARS2-206ENST00000473916 SSPOA2VEC9 5147 aa7.15□□□□□ -1.26
VARS2-206ENST00000473916 FSIP2Q5CZC0 6907 aa7.14□□□□□ -1.27
VARS2-206ENST00000473916 KRTAP23-1A1A580 65 aa7.11□□□□□ -1.27
VARS2-206ENST00000473916 KRTAP10-12P60413 245 aa7.07□□□□□ -1.28
VARS2-206ENST00000473916 LUZP6Q538Z0 58 aa7.03□□□□□ -1.28
VARS2-206ENST00000473916 KMT2DO14686 5537 aa7.02□□□□□ -1.29
VARS2-206ENST00000473916 LCE2DQ5TA82 110 aaPredicted RBP7.01□□□□□ -1.29
VARS2-206ENST00000473916 KRTAP19-6Q3LI70 58 aa6.96□□□□□ -1.29
VARS2-206ENST00000473916 KRTAP8-1Q8IUC2 63 aa6.93□□□□□ -1.3
VARS2-206ENST00000473916 KRTAP4-8A0A0G2JLE6 195 aa6.91□□□□□ -1.3
VARS2-206ENST00000473916 KRTAP4-8Q9BYQ9 185 aa6.91□□□□□ -1.3
VARS2-206ENST00000473916 KRTAP12-3P60328 96 aa6.81□□□□□ -1.32
VARS2-206ENST00000473916 FCGBPQ9Y6R7 5405 aaPredicted RBP6.8□□□□□ -1.32
VARS2-206ENST00000473916 KRTAP19-5Q3LI72 72 aa6.77□□□□□ -1.32
VARS2-206ENST00000473916 KRTAP9-2Q9BYQ4 174 aa6.74□□□□□ -1.33
VARS2-206ENST00000473916 KRTAP19-7Q3SYF9 63 aa6.64□□□□□ -1.35
VARS2-206ENST00000473916 SPRR5A0A1B0GTR4 108 aa6.53□□□□□ -1.36
VARS2-206ENST00000473916 CRCT1Q9UGL9 99 aa6.5□□□□□ -1.37
VARS2-206ENST00000473916 MT1EP04732 61 aa6.49□□□□□ -1.37
VARS2-206ENST00000473916 MACF1Q9UPN3 7388 aaKnown RBP6.47□□□□□ -1.37
VARS2-206ENST00000473916 MUC12Q9UKN1 5478 aa6.4□□□□□ -1.39
VARS2-206ENST00000473916 MT1LQ93083 61 aa6.39□□□□□ -1.39
VARS2-206ENST00000473916 LCE3CQ5T5A8 94 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms