RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	NDUFS5	O43920	106 aa		4.51	□□□□□ -1.69
MCF2L-223	ENST00000473345	SPINK7	P58062	85 aa		4.51	□□□□□ -1.69
MCF2L-223	ENST00000473345		Q5W150	140 aa		4.51	□□□□□ -1.69
MCF2L-223	ENST00000473345	MUC12	Q9UKN1	5478 aa		4.49	□□□□□ -1.69
MCF2L-223	ENST00000473345		H3BPC8	53 aa		4.49	□□□□□ -1.69
MCF2L-223	ENST00000473345	PCP4	P48539	62 aa		4.49	□□□□□ -1.69
MCF2L-223	ENST00000473345	KRTAP20-1	Q3LI63	56 aa		4.49	□□□□□ -1.69
MCF2L-223	ENST00000473345		H0Y9P7	68 aa		4.48	□□□□□ -1.69
MCF2L-223	ENST00000473345	KLKP1	Q107X0	134 aa		4.47	□□□□□ -1.69
MCF2L-223	ENST00000473345	CCDC179	H3BU77	68 aa		4.46	□□□□□ -1.7
MCF2L-223	ENST00000473345	MP68	P56378	58 aa		4.46	□□□□□ -1.7
MCF2L-223	ENST00000473345	MT1B	P07438	61 aa		4.45	□□□□□ -1.7
MCF2L-223	ENST00000473345	C20orf197	Q8N268	126 aa		4.45	□□□□□ -1.7
MCF2L-223	ENST00000473345	LOC101927531	A0A1B0GV80	90 aa		4.44	□□□□□ -1.7
MCF2L-223	ENST00000473345	IGKV2-30	P06310	120 aa		4.44	□□□□□ -1.7
MCF2L-223	ENST00000473345	LINC00208	Q96KT6	92 aa		4.44	□□□□□ -1.7
MCF2L-223	ENST00000473345	C1orf64	Q8NEQ6	169 aa		4.43	□□□□□ -1.7
MCF2L-223	ENST00000473345	CYP4F30P	Q9H0H9	118 aa		4.42	□□□□□ -1.7
MCF2L-223	ENST00000473345	CYSTM1	Q9H1C7	97 aa		4.42	□□□□□ -1.7
MCF2L-223	ENST00000473345	SNURF	Q9Y675	71 aa		4.42	□□□□□ -1.7
MCF2L-223	ENST00000473345	KRTAP5-9	P26371	169 aa		4.41	□□□□□ -1.7
MCF2L-223	ENST00000473345	KRTAP23-1	A1A580	65 aa		4.39	□□□□□ -1.71
MCF2L-223	ENST00000473345		H7BZZ5	65 aa		4.39	□□□□□ -1.71
MCF2L-223	ENST00000473345	NDUFC1	O43677	76 aa		4.39	□□□□□ -1.71
MCF2L-223	ENST00000473345	C7orf65	Q6ZTY9	151 aa		4.39	□□□□□ -1.71
MCF2L-223	ENST00000473345		A6NN06	94 aa		4.38	□□□□□ -1.71
MCF2L-223	ENST00000473345	H1FX-AS1	Q4G0G2	97 aa		4.38	□□□□□ -1.71
MCF2L-223	ENST00000473345	IGKV2D-30	A0A075B6S6	120 aa		4.36	□□□□□ -1.71
MCF2L-223	ENST00000473345	KMT2D	O14686	5537 aa		4.36	□□□□□ -1.71
MCF2L-223	ENST00000473345	MDN1	Q9NU22	5596 aa		4.35	□□□□□ -1.71
MCF2L-223	ENST00000473345	KRTAP10-5	P60370	271 aa		4.35	□□□□□ -1.71
MCF2L-223	ENST00000473345	SPANXA2-OT1	Q8N9U9	137 aa		4.34	□□□□□ -1.71
MCF2L-223	ENST00000473345	KRTAP19-8	Q3LI54	63 aa		4.33	□□□□□ -1.72
MCF2L-223	ENST00000473345	TMEM258	P61165	79 aa		4.31	□□□□□ -1.72
MCF2L-223	ENST00000473345	SPRR2G	Q9BYE4	73 aa		4.29	□□□□□ -1.72
MCF2L-223	ENST00000473345	KRTAP2-3	P0C7H8	128 aa		4.28	□□□□□ -1.72
MCF2L-223	ENST00000473345	ATP5E	P56381	51 aa	Predicted RBP	4.28	□□□□□ -1.72
MCF2L-223	ENST00000473345	C4orf26	Q17RF5	130 aa		4.28	□□□□□ -1.72
MCF2L-223	ENST00000473345	KRTAP3-1	Q9BYR8	98 aa		4.28	□□□□□ -1.72
MCF2L-223	ENST00000473345	KRTAP2-4	Q9BYR9	128 aa		4.28	□□□□□ -1.72
MCF2L-223	ENST00000473345		Q5VV11	94 aa		4.27	□□□□□ -1.73
MCF2L-223	ENST00000473345	DMAC1	Q96GE9	116 aa		4.27	□□□□□ -1.73
MCF2L-223	ENST00000473345		A8MUN3	132 aa		4.25	□□□□□ -1.73
MCF2L-223	ENST00000473345	ACYP2	P14621	99 aa		4.22	□□□□□ -1.73
MCF2L-223	ENST00000473345	KRTAP19-4	Q3LI73	84 aa		4.22	□□□□□ -1.73
MCF2L-223	ENST00000473345	CSAG1	Q6PB30	78 aa		4.2	□□□□□ -1.74
MCF2L-223	ENST00000473345	SPRR2E	P22531	72 aa		4.18	□□□□□ -1.74
MCF2L-223	ENST00000473345	SPRR2B	P35325	72 aa		4.18	□□□□□ -1.74
MCF2L-223	ENST00000473345	SPRR2A	P35326	72 aa		4.18	□□□□□ -1.74
MCF2L-223	ENST00000473345	RPS28	P62857	69 aa	Known RBP	4.18	□□□□□ -1.74
MCF2L-223	ENST00000473345	SERP1	Q9Y6X1	66 aa		4.18	□□□□□ -1.74
MCF2L-223	ENST00000473345	SPRR2F	Q96RM1	72 aa		4.17	□□□□□ -1.74
MCF2L-223	ENST00000473345		S4R3F8	94 aa		4.17	□□□□□ -1.74
MCF2L-223	ENST00000473345	LOC100996750	A0A140TA64	210 aa		4.16	□□□□□ -1.74
MCF2L-223	ENST00000473345	COA5	Q86WW8	74 aa		4.16	□□□□□ -1.74
MCF2L-223	ENST00000473345	KRTAP4-6	Q9BYQ5	205 aa		4.16	□□□□□ -1.74
MCF2L-223	ENST00000473345	LCA10	Q71F78	164 aa		4.15	□□□□□ -1.75
MCF2L-223	ENST00000473345	CRIPT	Q9P021	101 aa		4.15	□□□□□ -1.75
MCF2L-223	ENST00000473345	LCE1A	Q5T7P2	110 aa		4.14	□□□□□ -1.75
MCF2L-223	ENST00000473345		A0A0A0MQY5	61 aa		4.13	□□□□□ -1.75
MCF2L-223	ENST00000473345	KRTAP2-2	Q9BYT5	123 aa		4.13	□□□□□ -1.75
MCF2L-223	ENST00000473345	KRTAP2-1	Q9BYU5	128 aa		4.13	□□□□□ -1.75
MCF2L-223	ENST00000473345	CHKB-CPT1B	H3BT56	60 aa		4.09	□□□□□ -1.75
MCF2L-223	ENST00000473345	MT1X	P80297	61 aa		4.08	□□□□□ -1.76
MCF2L-223	ENST00000473345	SPTSSB	Q8NFR3	76 aa		4.07	□□□□□ -1.76
MCF2L-223	ENST00000473345	SMIM26	A0A096LP01	95 aa		4.06	□□□□□ -1.76
MCF2L-223	ENST00000473345	KRTAP4-8	A0A0G2JLE6	195 aa		4.05	□□□□□ -1.76
MCF2L-223	ENST00000473345	KRTAP4-8	Q9BYQ9	185 aa		4.05	□□□□□ -1.76
MCF2L-223	ENST00000473345		H0YAA0	97 aa		4.04	□□□□□ -1.76
MCF2L-223	ENST00000473345	SPRR2D	P22532	72 aa		4.03	□□□□□ -1.76
MCF2L-223	ENST00000473345	KRTAP8-1	Q8IUC2	63 aa		4.03	□□□□□ -1.76
MCF2L-223	ENST00000473345		Q1T7F1	81 aa		4.02	□□□□□ -1.77
MCF2L-223	ENST00000473345	LINC01558	Q9Y6Z2	57 aa		4.02	□□□□□ -1.77
MCF2L-223	ENST00000473345	PRO2289	Q9P1D8	64 aa		4.01	□□□□□ -1.77
MCF2L-223	ENST00000473345		V9GYY9	64 aa		3.99	□□□□□ -1.77
MCF2L-223	ENST00000473345	KRTAP12-2	P59991	146 aa		3.96	□□□□□ -1.78
MCF2L-223	ENST00000473345	LCE3B	Q5TA77	95 aa		3.96	□□□□□ -1.78
MCF2L-223	ENST00000473345		A0A1B0GU69	56 aa		3.92	□□□□□ -1.78
MCF2L-223	ENST00000473345		P0C880	135 aa		3.91	□□□□□ -1.78
MCF2L-223	ENST00000473345	SEC61G	P60059	68 aa		3.91	□□□□□ -1.78
MCF2L-223	ENST00000473345	KRTAP10-7	P60409	375 aa	Predicted RBP	3.91	□□□□□ -1.78
MCF2L-223	ENST00000473345	ADM2	Q7Z4H4	148 aa		3.91	□□□□□ -1.78
MCF2L-223	ENST00000473345	PRR15L	Q9BU68	103 aa		3.9	□□□□□ -1.79
MCF2L-223	ENST00000473345	GPR98	Q8WXG9	6306 aa		3.89	□□□□□ -1.79
MCF2L-223	ENST00000473345	PLAC4	Q8WY50	150 aa		3.89	□□□□□ -1.79
MCF2L-223	ENST00000473345	PSPHP1	O15172	72 aa		3.88	□□□□□ -1.79
MCF2L-223	ENST00000473345		A0A1B0GU33	70 aa		3.85	□□□□□ -1.79
MCF2L-223	ENST00000473345		R4GN34	69 aa		3.85	□□□□□ -1.79
MCF2L-223	ENST00000473345	KRTAP10-12	P60413	245 aa		3.84	□□□□□ -1.79
MCF2L-223	ENST00000473345	KRTAP4-9	Q9BYQ8	210 aa		3.84	□□□□□ -1.79
MCF2L-223	ENST00000473345		M0QZ58	72 aa		3.82	□□□□□ -1.8
MCF2L-223	ENST00000473345	UQCR11	O14957	56 aa		3.82	□□□□□ -1.8
MCF2L-223	ENST00000473345	KRTAP13-4	Q3LI77	160 aa		3.81	□□□□□ -1.8
MCF2L-223	ENST00000473345	SPATA8	Q6RVD6	105 aa		3.78	□□□□□ -1.8
MCF2L-223	ENST00000473345	DST	Q03001	7570 aa	Known RBP	3.78	□□□□□ -1.81
MCF2L-223	ENST00000473345	KRTAP4-12	Q9BQ66	201 aa		3.77	□□□□□ -1.81
MCF2L-223	ENST00000473345		A6NED7	52 aa		3.76	□□□□□ -1.81
MCF2L-223	ENST00000473345	MIR22HG	Q0VDD5	57 aa		3.75	□□□□□ -1.81
MCF2L-223	ENST00000473345	KRTAP15-1	Q3LI76	137 aa		3.75	□□□□□ -1.81
MCF2L-223	ENST00000473345	CDC42SE1	Q9NRR8	79 aa		3.73	□□□□□ -1.81

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