RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 LINC00472Q9H8W2 130 aa3.61□□□□□ -1.83
HDAC1-205ENST00000472928 A8MUN3 132 aa3.6□□□□□ -1.83
HDAC1-205ENST00000472928 ASB16-AS1Q495Z4 193 aa3.6□□□□□ -1.83
HDAC1-205ENST00000472928 A6NN06 94 aa3.59□□□□□ -1.83
HDAC1-205ENST00000472928 K7EQZ3 153 aa3.59□□□□□ -1.83
HDAC1-205ENST00000472928 DSCR10P59022 87 aa3.59□□□□□ -1.83
HDAC1-205ENST00000472928 RPS29P62273 56 aaKnown RBP3.59□□□□□ -1.83
HDAC1-205ENST00000472928 SPANXA2-OT1Q8N9U9 137 aa3.59□□□□□ -1.83
HDAC1-205ENST00000472928 PRAC1Q96KF2 57 aa3.59□□□□□ -1.83
HDAC1-205ENST00000472928 LOC101927531A0A1B0GV80 90 aa3.58□□□□□ -1.84
HDAC1-205ENST00000472928 A8MWP4 228 aa3.58□□□□□ -1.84
HDAC1-205ENST00000472928 H3BPC8 53 aa3.58□□□□□ -1.84
HDAC1-205ENST00000472928 HCG22E2RYF7 251 aa3.57□□□□□ -1.84
HDAC1-205ENST00000472928 CHKB-CPT1BH3BT56 60 aa3.57□□□□□ -1.84
HDAC1-205ENST00000472928 C7orf65Q6ZTY9 151 aa3.57□□□□□ -1.84
HDAC1-205ENST00000472928 LCA10Q71F78 164 aa3.57□□□□□ -1.84
HDAC1-205ENST00000472928 IGHV6-1A0A0B4J1U7 121 aa3.56□□□□□ -1.84
HDAC1-205ENST00000472928 A0A1B0GVX0 72 aa3.56□□□□□ -1.84
HDAC1-205ENST00000472928 TPRXLQ17RH7 258 aa3.56□□□□□ -1.84
HDAC1-205ENST00000472928 RETNLBQ9BQ08 111 aa3.56□□□□□ -1.84
HDAC1-205ENST00000472928 CDC42SE1Q9NRR8 79 aa3.56□□□□□ -1.84
HDAC1-205ENST00000472928 MP68P56378 58 aa3.55□□□□□ -1.84
HDAC1-205ENST00000472928 KRTAP4-1Q9BYQ7 146 aa3.55□□□□□ -1.84
HDAC1-205ENST00000472928 MMP24-AS1A0A0U1RRL7 71 aa3.54□□□□□ -1.84
HDAC1-205ENST00000472928 LCE1AQ5T7P2 110 aa3.54□□□□□ -1.84
HDAC1-205ENST00000472928 WFDC13Q8IUB5 93 aa3.54□□□□□ -1.84
HDAC1-205ENST00000472928 LINC00208Q96KT6 92 aa3.54□□□□□ -1.84
HDAC1-205ENST00000472928 C8orf17Q9NRJ1 99 aa3.54□□□□□ -1.84
HDAC1-205ENST00000472928 IGLV7-46A0A075B6I9 117 aa3.53□□□□□ -1.84
HDAC1-205ENST00000472928 SPTSSBQ8NFR3 76 aa3.53□□□□□ -1.84
HDAC1-205ENST00000472928 PRR15LQ9BU68 103 aa3.53□□□□□ -1.84
HDAC1-205ENST00000472928 A8MU10 97 aa3.52□□□□□ -1.85
HDAC1-205ENST00000472928 C8orf87E5RJ46 101 aa3.52□□□□□ -1.85
HDAC1-205ENST00000472928 CASC2Q6XLA1 102 aa3.52□□□□□ -1.85
HDAC1-205ENST00000472928 A6NED7 52 aa3.51□□□□□ -1.85
HDAC1-205ENST00000472928 NOTCH2NLQ7Z3S9 236 aa3.51□□□□□ -1.85
HDAC1-205ENST00000472928 LINC01558Q9Y6Z2 57 aa3.51□□□□□ -1.85
HDAC1-205ENST00000472928 LINC00313P59037 77 aa3.49□□□□□ -1.85
HDAC1-205ENST00000472928 C9orf92A6NGG3 77 aa3.48□□□□□ -1.85
HDAC1-205ENST00000472928 KRTAP19-2Q3LHN2 52 aa3.48□□□□□ -1.85
HDAC1-205ENST00000472928 MRPL34Q9BQ48 92 aaKnown RBP3.48□□□□□ -1.85
HDAC1-205ENST00000472928 MT1HP80294 61 aa3.47□□□□□ -1.85
HDAC1-205ENST00000472928 COA5Q86WW8 74 aa3.47□□□□□ -1.85
HDAC1-205ENST00000472928 SSPOA2VEC9 5147 aa3.46□□□□□ -1.86
HDAC1-205ENST00000472928 KRTAP16-1A8MUX0 517 aa3.46□□□□□ -1.86
HDAC1-205ENST00000472928 H0Y9P7 68 aa3.46□□□□□ -1.86
HDAC1-205ENST00000472928 KRTAP13-3Q3SY46 172 aa3.46□□□□□ -1.86
HDAC1-205ENST00000472928 KRTAP10-6P60371 365 aaPredicted RBP3.44□□□□□ -1.86
HDAC1-205ENST00000472928 LINC01554Q52M75 96 aa3.43□□□□□ -1.86
HDAC1-205ENST00000472928 TP53AIP1Q9HCN2 124 aa3.42□□□□□ -1.86
HDAC1-205ENST00000472928 FLGP20930 4061 aaPredicted RBP3.42□□□□□ -1.86
HDAC1-205ENST00000472928 USH2AO75445 5202 aa3.41□□□□□ -1.86
HDAC1-205ENST00000472928 A8MUU9 505 aa3.41□□□□□ -1.86
HDAC1-205ENST00000472928 C20orf166-AS1Q96NR2 134 aa3.41□□□□□ -1.86
HDAC1-205ENST00000472928 FCGBPQ9Y6R7 5405 aaPredicted RBP3.4□□□□□ -1.86
HDAC1-205ENST00000472928 SPINK7P58062 85 aa3.4□□□□□ -1.87
HDAC1-205ENST00000472928 Q5W150 140 aa3.39□□□□□ -1.87
HDAC1-205ENST00000472928 RPL37P61927 97 aaKnown RBP3.38□□□□□ -1.87
HDAC1-205ENST00000472928 HRES1P13985 223 aa3.36□□□□□ -1.87
HDAC1-205ENST00000472928 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
HDAC1-205ENST00000472928 SPATA8Q6RVD6 105 aa3.35□□□□□ -1.87
HDAC1-205ENST00000472928 NDUFAF8A1L188 74 aa3.33□□□□□ -1.88
HDAC1-205ENST00000472928 PCOTHQ58A44 107 aa3.33□□□□□ -1.88
HDAC1-205ENST00000472928 M0R2T5 61 aa3.32□□□□□ -1.88
HDAC1-205ENST00000472928 KRTAP9-8Q9BYQ0 159 aa3.32□□□□□ -1.88
HDAC1-205ENST00000472928 MACF1Q9UPN3 7388 aaKnown RBP3.31□□□□□ -1.88
HDAC1-205ENST00000472928 MT3P25713 68 aa3.31□□□□□ -1.88
HDAC1-205ENST00000472928 ACYP2P14621 99 aa3.3□□□□□ -1.88
HDAC1-205ENST00000472928 ADM2Q7Z4H4 148 aa3.3□□□□□ -1.88
HDAC1-205ENST00000472928 UQCR11O14957 56 aa3.27□□□□□ -1.89
HDAC1-205ENST00000472928 MIR22HGQ0VDD5 57 aa3.27□□□□□ -1.89
HDAC1-205ENST00000472928 A0A1B0GU69 56 aa3.26□□□□□ -1.89
HDAC1-205ENST00000472928 COX6B2Q6YFQ2 88 aa3.26□□□□□ -1.89
HDAC1-205ENST00000472928 CSAG1Q6PB30 78 aa3.25□□□□□ -1.89
HDAC1-205ENST00000472928 DMAC1Q96GE9 116 aa3.25□□□□□ -1.89
HDAC1-205ENST00000472928 NEBP20929 6669 aa3.23□□□□□ -1.89
HDAC1-205ENST00000472928 KRTAP2-2Q9BYT5 123 aa3.23□□□□□ -1.89
HDAC1-205ENST00000472928 ROMO1P60602 79 aa3.19□□□□□ -1.9
HDAC1-205ENST00000472928 KRTAP25-1Q3LHN0 102 aa3.19□□□□□ -1.9
HDAC1-205ENST00000472928 MT2AP02795 61 aa3.17□□□□□ -1.9
HDAC1-205ENST00000472928 KRTAP6-3Q3LI67 103 aa3.16□□□□□ -1.9
HDAC1-205ENST00000472928 MT1FP04733 61 aa3.15□□□□□ -1.91
HDAC1-205ENST00000472928 KRTAP19-6Q3LI70 58 aa3.14□□□□□ -1.91
HDAC1-205ENST00000472928 H1FX-AS1Q4G0G2 97 aa3.14□□□□□ -1.91
HDAC1-205ENST00000472928 S4R3F8 94 aa3.14□□□□□ -1.91
HDAC1-205ENST00000472928 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
HDAC1-205ENST00000472928 MUC12Q9UKN1 5478 aa3.11□□□□□ -1.91
HDAC1-205ENST00000472928 P0C880 135 aa3.08□□□□□ -1.92
HDAC1-205ENST00000472928 KRTAP10-10P60014 251 aa3.07□□□□□ -1.92
HDAC1-205ENST00000472928 KRTAP20-1Q3LI63 56 aa3.06□□□□□ -1.92
HDAC1-205ENST00000472928 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
HDAC1-205ENST00000472928 H0YAA0 97 aa3.04□□□□□ -1.92
HDAC1-205ENST00000472928 K7ERS5 55 aa3.04□□□□□ -1.92
HDAC1-205ENST00000472928 A0A1B0GU33 70 aa3.03□□□□□ -1.92
HDAC1-205ENST00000472928 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
HDAC1-205ENST00000472928 KMT2DO14686 5537 aa2.99□□□□□ -1.93
HDAC1-205ENST00000472928 SPINT4Q6UDR6 99 aa2.97□□□□□ -1.93
HDAC1-205ENST00000472928 KRTAP10-12P60413 245 aa2.92□□□□□ -1.94
HDAC1-205ENST00000472928 CRIPTQ9P021 101 aa2.92□□□□□ -1.94
HDAC1-205ENST00000472928 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms