RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 PCOTHQ58A44 107 aa3.61□□□□□ -1.83
SPEN-204ENST00000471538 PRR26Q8N8Z3 221 aa3.61□□□□□ -1.83
SPEN-204ENST00000471538 MPLKIPQ8TAP9 179 aa3.61□□□□□ -1.83
SPEN-204ENST00000471538 SMR3BP02814 79 aaPredicted RBP3.6□□□□□ -1.83
SPEN-204ENST00000471538 SPAG11AQ6PDA7 123 aa3.59□□□□□ -1.84
SPEN-204ENST00000471538 COA5Q86WW8 74 aa3.59□□□□□ -1.84
SPEN-204ENST00000471538 LINC00304Q8N9R0 145 aa3.59□□□□□ -1.84
SPEN-204ENST00000471538 IGKV2-30P06310 120 aa3.57□□□□□ -1.84
SPEN-204ENST00000471538 HRES1P13985 223 aa3.56□□□□□ -1.84
SPEN-204ENST00000471538 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
SPEN-204ENST00000471538 KRTAP15-1Q3LI76 137 aa3.55□□□□□ -1.84
SPEN-204ENST00000471538 V9GYY9 64 aa3.55□□□□□ -1.84
SPEN-204ENST00000471538 FAT4Q6V0I7 4981 aa3.54□□□□□ -1.84
SPEN-204ENST00000471538 DMAC1Q96GE9 116 aa3.53□□□□□ -1.84
SPEN-204ENST00000471538 RETNLBQ9BQ08 111 aa3.53□□□□□ -1.84
SPEN-204ENST00000471538 Q5VV11 94 aa3.53□□□□□ -1.85
SPEN-204ENST00000471538 A8MUN3 132 aa3.52□□□□□ -1.85
SPEN-204ENST00000471538 PSPHP1O15172 72 aa3.52□□□□□ -1.85
SPEN-204ENST00000471538 PRO0628Q9UI54 55 aa3.52□□□□□ -1.85
SPEN-204ENST00000471538 A8MUU9 505 aa3.51□□□□□ -1.85
SPEN-204ENST00000471538 C20orf166-AS1Q96NR2 134 aa3.51□□□□□ -1.85
SPEN-204ENST00000471538 LINC01558Q9Y6Z2 57 aa3.51□□□□□ -1.85
SPEN-204ENST00000471538 ACYP2P14621 99 aa3.5□□□□□ -1.85
SPEN-204ENST00000471538 BRK1Q8WUW1 75 aa3.49□□□□□ -1.85
SPEN-204ENST00000471538 LPAP08519 4548 aa3.49□□□□□ -1.85
SPEN-204ENST00000471538 IGKV2D-30A0A075B6S6 120 aa3.48□□□□□ -1.85
SPEN-204ENST00000471538 KRTAP10-8P60410 259 aa3.48□□□□□ -1.85
SPEN-204ENST00000471538 Q75L30 129 aa3.48□□□□□ -1.85
SPEN-204ENST00000471538 PRR15LQ9BU68 103 aa3.48□□□□□ -1.85
SPEN-204ENST00000471538 MUC2Q02817 5179 aa3.47□□□□□ -1.85
SPEN-204ENST00000471538 C7orf65Q6ZTY9 151 aa3.47□□□□□ -1.85
SPEN-204ENST00000471538 C9orf92A6NGG3 77 aa3.46□□□□□ -1.86
SPEN-204ENST00000471538 CHKB-CPT1BH3BT56 60 aa3.44□□□□□ -1.86
SPEN-204ENST00000471538 MT1HL1P0DM35 61 aa3.44□□□□□ -1.86
SPEN-204ENST00000471538 A8MU10 97 aa3.43□□□□□ -1.86
SPEN-204ENST00000471538 LCA10Q71F78 164 aa3.41□□□□□ -1.86
SPEN-204ENST00000471538 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
SPEN-204ENST00000471538 A6NED7 52 aa3.39□□□□□ -1.87
SPEN-204ENST00000471538 SPINK7P58062 85 aa3.39□□□□□ -1.87
SPEN-204ENST00000471538 CDC42SE1Q9NRR8 79 aa3.38□□□□□ -1.87
SPEN-204ENST00000471538 KRTAP23-1A1A580 65 aa3.37□□□□□ -1.87
SPEN-204ENST00000471538 RPL37P61927 97 aaKnown RBP3.36□□□□□ -1.87
SPEN-204ENST00000471538 A0A1B0GU69 56 aa3.36□□□□□ -1.87
SPEN-204ENST00000471538 COX6B2Q6YFQ2 88 aa3.34□□□□□ -1.88
SPEN-204ENST00000471538 ATP11AUNQ6ZP68 121 aa3.34□□□□□ -1.88
SPEN-204ENST00000471538 MUC17Q685J3 4493 aa3.32□□□□□ -1.88
SPEN-204ENST00000471538 SPATA8Q6RVD6 105 aa3.32□□□□□ -1.88
SPEN-204ENST00000471538 A6NN06 94 aa3.31□□□□□ -1.88
SPEN-204ENST00000471538 KRTAP10-7P60409 375 aaPredicted RBP3.31□□□□□ -1.88
SPEN-204ENST00000471538 SPTSSBQ8NFR3 76 aa3.31□□□□□ -1.88
SPEN-204ENST00000471538 FSIP2Q5CZC0 6907 aa3.29□□□□□ -1.88
SPEN-204ENST00000471538 UQCR11O14957 56 aa3.28□□□□□ -1.88
SPEN-204ENST00000471538 PMAIP1Q13794 54 aa3.28□□□□□ -1.88
SPEN-204ENST00000471538 TPRXLQ17RH7 258 aa3.28□□□□□ -1.88
SPEN-204ENST00000471538 MIR22HGQ0VDD5 57 aa3.27□□□□□ -1.89
SPEN-204ENST00000471538 SEC61GP60059 68 aa3.26□□□□□ -1.89
SPEN-204ENST00000471538 KTN1-AS1Q86SY8 53 aa3.24□□□□□ -1.89
SPEN-204ENST00000471538 H0YAA0 97 aa3.23□□□□□ -1.89
SPEN-204ENST00000471538 H1FX-AS1Q4G0G2 97 aa3.23□□□□□ -1.89
SPEN-204ENST00000471538 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
SPEN-204ENST00000471538 A0A1B0GU33 70 aa3.21□□□□□ -1.9
SPEN-204ENST00000471538 S4R3F8 94 aa3.21□□□□□ -1.9
SPEN-204ENST00000471538 KRTAP10-6P60371 365 aaPredicted RBP3.2□□□□□ -1.9
SPEN-204ENST00000471538 CRCT1Q9UGL9 99 aa3.18□□□□□ -1.9
SPEN-204ENST00000471538 SEC61BP60468 96 aaKnown RBP3.16□□□□□ -1.9
SPEN-204ENST00000471538 RBM12B-AS1Q9P1G2 102 aa3.15□□□□□ -1.91
SPEN-204ENST00000471538 KRTAP13-4Q3LI77 160 aa3.14□□□□□ -1.91
SPEN-204ENST00000471538 KRTAP4-1Q9BYQ7 146 aa3.13□□□□□ -1.91
SPEN-204ENST00000471538 P0C880 135 aa3.12□□□□□ -1.91
SPEN-204ENST00000471538 ADM2Q7Z4H4 148 aa3.12□□□□□ -1.91
SPEN-204ENST00000471538 KRTAP19-2Q3LHN2 52 aa3.1□□□□□ -1.91
SPEN-204ENST00000471538 PRAC1Q96KF2 57 aa3.1□□□□□ -1.91
SPEN-204ENST00000471538 CSAG1Q6PB30 78 aa3.1□□□□□ -1.91
SPEN-204ENST00000471538 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
SPEN-204ENST00000471538 SSPOA2VEC9 5147 aa3.07□□□□□ -1.92
SPEN-204ENST00000471538 USH2AO75445 5202 aa3.05□□□□□ -1.92
SPEN-204ENST00000471538 KRTAP2-2Q9BYT5 123 aa3.05□□□□□ -1.92
SPEN-204ENST00000471538 K7ERS5 55 aa3.04□□□□□ -1.92
SPEN-204ENST00000471538 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
SPEN-204ENST00000471538 A0A0D9SG42 100 aa3.03□□□□□ -1.92
SPEN-204ENST00000471538 M0QZ58 72 aa3.03□□□□□ -1.92
SPEN-204ENST00000471538 KRTAP12-1P59990 96 aa3.02□□□□□ -1.93
SPEN-204ENST00000471538 KRTAP12-2P59991 146 aa3.02□□□□□ -1.93
SPEN-204ENST00000471538 FLGP20930 4061 aaPredicted RBP3.02□□□□□ -1.93
SPEN-204ENST00000471538 ROMO1P60602 79 aa3□□□□□ -1.93
SPEN-204ENST00000471538 KRTAP5-9P26371 169 aa2.99□□□□□ -1.93
SPEN-204ENST00000471538 KRTAP25-1Q3LHN0 102 aa2.99□□□□□ -1.93
SPEN-204ENST00000471538 KRTAP5-4Q6L8H1 288 aa2.99□□□□□ -1.93
SPEN-204ENST00000471538 FCGBPQ9Y6R7 5405 aaPredicted RBP2.98□□□□□ -1.93
SPEN-204ENST00000471538 LINC01554Q52M75 96 aa2.96□□□□□ -1.94
SPEN-204ENST00000471538 SYNE2Q8WXH0 6885 aaKnown RBP2.96□□□□□ -1.94
SPEN-204ENST00000471538 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
SPEN-204ENST00000471538 MT1HP80294 61 aa2.94□□□□□ -1.94
SPEN-204ENST00000471538 SPINT4Q6UDR6 99 aa2.94□□□□□ -1.94
SPEN-204ENST00000471538 R4GN34 69 aa2.94□□□□□ -1.94
SPEN-204ENST00000471538 CRIPTQ9P021 101 aa2.92□□□□□ -1.94
SPEN-204ENST00000471538 A0A0A0MQY5 61 aa2.9□□□□□ -1.95
SPEN-204ENST00000471538 MACF1Q9UPN3 7388 aaKnown RBP2.89□□□□□ -1.95
SPEN-204ENST00000471538 M0R2T5 61 aa2.87□□□□□ -1.95
SPEN-204ENST00000471538 C10orf95Q9H7T3 257 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 167.4 ms